Ostreococcus lucimarinus: OSTLU_27249
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Entry
OSTLU_27249 CDS
T01029
Symbol
CHR3524
Name
(RefSeq) predicted protein
KO
K15083
DNA repair protein RAD16
Organism
olu
Ostreococcus lucimarinus
Brite
KEGG Orthology (KO) [BR:
olu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
olu03400
]
OSTLU_27249 (CHR3524)
DNA repair and recombination proteins [BR:
olu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
OSTLU_27249 (CHR3524)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
zf-PARP
zf-RING_2
ResIII
zf-RING_5
zf-C3HC4
zf-RING_11
zf-rbx1
zf-RING_UBOX
zf-ANAPC11
DEAD
zf-C3HC4_2
zf-Nse
zf-TFIIIC
zf-RING_Vps41
zf-RING_6
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
5005214
NCBI-ProteinID:
XP_001421157
JGI:
27249
UniProt:
A4S6V0
LinkDB
All DBs
Position
13:complement(join(461078..464185,464262..464414))
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AA seq
1086 aa
AA seq
DB search
MVELTIVPSWDGKGVTWRPIFDDDEEAFAAYTHACEYAKSGRGKCGKCGEKIAKDAVRIG
EPLKYRGGDYGWISKWMHPECYRAEGVTREELETRVHGLDALKDGDREVLLATVLSPDRP
EIENTALDVTSEEFLRRPAVEPMEAPRALTRPLLGFQREGLRWMCDNESGDAKGGILADE
MGMGKTIQCISMLLARKEAWMRDRAEVGEMVTDDDRPPPTLVVVPTSALVQWEEEIKSCV
EEGSLRVFVYYADRANVVEGDFKGYDVVLTTYPVVEAEWRKIINRHLTACQWCGKKYLPR
SMVTHLKYFCGPDAVRTEKLARREVTRDVANEKAMRTLKIKPGSAKDVKKGIPTMANVYK
ELMAMAGRETLSMYDGAHKARARAASGLAPGGDVVVVKEEVEDGVAEPSEVLKALISQLP
VPTIVVENIKEESIEEKEKEVESVNEPALADASTAAIASTVKKAQKRKSKASGKATSTSS
AKKKKKSLREASDGEAESDYKPDSDSEDDEIILVDDSESEDRKPKKKQKKKKTPAKTEEA
DDVKASNIDDIPQTSQGGSQGGSQFEDEDDVDLSDSLLHRTQWHRIVLDEAHKIKARTSN
TAKCIYALKSTYKWCLTGTPLQNRIGDLYSLVRFLRMDPYAFYFCSTKGCECKTLTWNFG
PQARFCTNCGCGAPRHYSHFNRTVLNPINRYGYIGDGKKAMLTLRNDILLPMQLRRTKAE
RAEDVRLPDLKIIIQENTFNEVEQDFYESLYMLTRSKFDAFVKKGSVLHNYAHVFELLAR
LRQACDHPYLVIHSKSANVKKDAPDAPKVESPADTDVPKHYCGMCQDEIEEEDAALANCK
HIFHRECIMQYASCAPADGKKVTCPVCRTALTIDFSPESLENVKSAISRNFKDALPDKSI
LNKLDLTQYTSSTKVETLVNALRDMRNQENGHLNKAIVFSQYTAMIEIVEWRLKKAKFTI
AKLLGSMPVTQRAANLQAFREDPNVSVILMSLKSGGEGLNLQAANYVYVLEPWWNPAVEM
QAVMRAHRIGQLRPVTAVRFSTKGTIEERMMELQEKKQLVFEGCMDGNQAALSQLTAEDL
QFLFKR
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atggtcgaactcacgatcgtcccgtcgtgggacggtaagggcgtcacctggcgcccgata
ttcgacgacgacgaggaggctttcgcggcgtacacgcacgcgtgcgagtacgcgaagagc
ggacgcgggaagtgcgggaagtgcggggaaaagatcgcgaaggacgcggtgcgaatcggg
gaaccgctcaagtatcgcggcggcgattacggatggatatcgaagtggatgcatccggag
tgttatcgcgcggagggagtcacgagggaggagctggagacgcgcgtgcacgggttggac
gcgctgaaggatggggatcgggaggtgttgctggcgacggtgctgtcgccggatcggccg
gagatcgagaacacggcgttggacgtgacgagcgaggagtttttgcgtcggccggcggtg
gaaccgatggaggcgccgcgggcgttgacgcggccgttgttggggtttcagcgcgagggg
ttgcggtggatgtgcgataacgagagcggcgatgcgaagggggggatattggcggatgag
atggggatggggaagacgatacagtgcatatcgatgttgctggcgaggaaggaggcgtgg
atgcgagaccgcgccgaggtgggggagatggtgacggacgacgacagaccgccgccgacg
ctcgtggtggtgccgacgtcggcgctcgttcagtgggaagaagagatcaaatcgtgcgtc
gaggaagggtcgctgcgcgtgtttgtgtattacgctgatcgcgcaaacgtcgtggaagga
gactttaaaggatacgacgtcgtgttgacgacgtatcccgtcgtcgaagccgagtggcgg
aaaatcatcaaccgacacttgacggcgtgtcagtggtgtgggaaaaagtacttacctcgc
tccatggtgacgcacttgaagtacttctgtggaccagacgccgtgcgcacggaaaaactc
gcgcggcgcgaggtgacgcgcgacgtggcgaacgaaaaagccatgcgcacgctgaaaatc
aagccgggcagcgccaaggacgtgaagaaggggattcccacgatggcgaacgtatacaag
gaactcatggcgatggccggacgggagacgctgagcatgtatgatggcgcgcacaaggcg
cgcgcacgcgcggcttcaggtctcgccccgggcggcgacgtcgtcgtcgtcaaggaggaa
gttgaagacggcgtcgccgagccgagcgaagttctgaaagctttgatttcgcagcttcca
gtgccgacgattgtagttgagaatatcaaagaggagtcgattgaggagaaagaaaaagag
gtcgagtcagtgaacgagcccgccttggctgacgcgtcaacggcggcgatagcgagtacg
gtgaagaaggcgcagaagcgcaagtcgaaggcttcgggtaaagcgacttcgacttcgagc
gcaaagaaaaagaagaagagtctgcgcgaagctagcgacggcgaggctgaaagtgattac
aaaccggacagtgatagcgaagatgatgagatcatattagtcgacgatagcgagagcgaa
gatagaaagccaaagaagaaacagaagaaaaagaaaacgccggcgaaaaccgaggaagcg
gacgacgtgaaggcgtccaacatcgacgacattccgcaaacctcgcaaggtggttcgcaa
ggtgggagccagtttgaagacgaagacgacgtagatttgtcggattcccttcttcatcgc
acgcagtggcaccgaatcgttctcgacgaagcgcacaagatcaaggcgcgcacgagcaac
accgccaagtgtatctacgctttgaaatccacgtataagtggtgtttgacaggtacaccg
ttgcagaatcgaatcggcgatctttacagcttggtgagatttttgcgtatggatccgtac
gcgttttacttttgttcgacgaagggttgcgagtgcaaaacgctcacctggaacttcggt
cctcaggcgcgattttgtaccaactgcggatgcggcgctcctaggcattattcgcatttc
aatcgcaccgtgctaaacccgatcaaccgttatggctacatcggtgacggcaagaaagcg
atgctgactcttagaaatgacattttgttgccgatgcaacttcgccggaccaaggcggaa
cgcgccgaggacgtgcgactgccggacttgaagattatcattcaagaaaacacattcaat
gaggttgaacaagacttttacgagtctctgtacatgctgacgcgctcgaagttcgacgcg
ttcgtgaagaaagggagcgttttgcacaactacgcacacgtcttcgagctcctcgcacga
ctgcgacaagcgtgcgatcatccgtacttggtgattcattcgaagagtgcgaacgtgaaa
aaagacgcccctgacgcgccgaaagttgaatccccggcagacaccgacgttccgaagcat
tattgtggcatgtgtcaggacgaaattgaggaagaagacgcggctctggcgaattgcaaa
cacattttccatcgtgagtgcatcatgcaatacgcgtcttgtgcgcctgcggatggcaaa
aaagtgacttgtcccgtctgtcgcacggcgttgacgattgacttctctccagaaagtctc
gaaaacgtcaagagtgccattagtcgtaatttcaaggatgcgctaccagacaagtcaatt
ctcaacaagctcgatctcacgcagtacacgtcgagcacaaaggttgagacgctcgttaac
gctctgcgagacatgcgtaatcaagaaaatgggcacttaaacaaagccatcgtgttttcg
cagtacacagccatgatagaaatcgtcgaatggcgtttgaaaaaggccaagtttaccatc
gccaagcttctcggttccatgccggtcacgcaacgcgcggcgaatttgcaagctttccga
gaagatccaaacgtcagcgtgatcttgatgagtctcaaatctggcggtgaaggactcaac
ttgcaagcggcgaattacgtatacgttcttgagccatggtggaacccagcggtggaaatg
caagccgtgatgcgcgcacatcgcatcgggcagcttcgaccggtgaccgctgttcgattt
tcgaccaaaggcacgattgaagaacgcatgatggagcttcaagaaaagaagcagcttgtg
ttcgaagggtgtatggacggcaatcaagccgcgctttctcaactgactgccgaagacttg
caatttttgttcaagcgatga
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integrated database retrieval system
