Ostreococcus lucimarinus: OSTLU_35547
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Entry
OSTLU_35547 CDS
T01029
Name
(RefSeq) predicted protein
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
olu
Ostreococcus lucimarinus
Pathway
olu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
olu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
OSTLU_35547
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
olu03041
]
OSTLU_35547
Spliceosome [BR:
olu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
OSTLU_35547
Complex C
U5 SnRNP specific factors
OSTLU_35547
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
MMR_HSR1
SRPRB
Septin
EF-G_D2
ATG17_like
Motif
Other DBs
NCBI-GeneID:
5002916
NCBI-ProteinID:
XP_001418820
JGI:
35547
UniProt:
A4RZM1
LinkDB
All DBs
Position
7:complement(join(57349..60033,60061..60225,60319..60393))
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AA seq
974 aa
AA seq
DB search
MDANLYDEFGNYVGPEIGSSDDDDDDDAMDDDDLNASAITLAEDKKYYPTAEEVYGEGTE
TLVENEDAQALETPIVAPVKRYVGGSVGAQVQSQDAEVAMKVSEEFLVGLHGESRRMGRN
VCVAGHLHHGKTTLFDMLLECSHDVNYDWLANDKQLRYTDTRMDEQARGISLKSTPMTLP
LQTSRGKTMVFNVMDTPGHVNFSDEVTASMRLADGVLLVVDACEGVMTSTTRQIKHAARD
GLPVCVFISKIDRLIVELKLPPADAYHKLRHTIEEINGLIETFYTPDADGALPTVSPENG
KVCFGSALYGFSFTLESFAKLYVDVNGVLVDHKEFAKRMWGDVYYHGDTRMFKKKPPPGG
GERTFVQFILEPLYKVFSQVVGETIDSVSDKLKEFGIKLKPKETKANTKPLLKMTCQKIF
GAASGLADMLAAHIPTAEEGAAMKIERAYSGPVKNGGKLVDAMRACDPDAPAVVMVSKLI
PKSDCSAFDALGRVMCGTLRKNDRVRVLGENFSPDDEEDSVVKNVTNMWIYEARYRIPIK
EARAGAWVLIEGIDQSITTTATLVPEKMPKGYDDDLYAFKPLEFDNKSVMKIAAEPLNPS
DLPKMVEGLRKITKSYPACVTKVEESGEHTIMGTGELFLDSVMKDLREMYSEIEVKVSDP
VVCFNETVVETSSLKCYAETPNKKNKLTMIAEPLDKGLARDIETGKVNLSAPKKQVSDFF
KSEYEWDALAAKSVWAFGPDAAGPNALLDDTLPSEVDKGLLAAIRDSVVQGFQWGTREGP
LCDEPIREVKFKILDAVVADAPLQRGGGQIIPTARRCAYSAFLMATPRLMEPIYEVEIQS
PADCMSAIYTVLSKRRGHVVSDAPKPGTPVYTVKALIPAIETFGFETDLRYHTQGQAFGQ
SYFDHWAVVPGDPLDKTVVLRPLEPAPVPHLAREFMVKTRRRKGMSEDVTVSKFFDDDLL
IELAQADTELAGLF
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgaacctgtacgatgagttcggaaactacgtcggccccgagattggatcgtcg
gacgacgacgacgacgacgacgcgatggacgatgatgacttgaacgcgtccgcgatcacg
ctcgcggaggataaaaagtactacccgaccgccgaggaggtgtacggggagggcacggag
acgctcgtggagaacgaagacgcgcaggcgctcgagacgcccatcgtggcgccggtaaag
agatacgtgggaggaagcgtgggggcgcaagtgcagtcgcaagacgcggaggtcgccatg
aaggtgagcgaggagttcctggtgggcttgcacggggagtcgcgaagaatgggacgcaac
gtgtgcgtggcgggacatttgcatcacgggaaaacgacgctgtttgacatgctgctcgag
tgttcgcacgacgtgaattatgactggctggcgaacgataagcagctgaggtacacggat
acgaggatggatgagcaggcgagagggatttcgctcaagtcgacgccgatgacgctgccg
ttgcagacgagtcgagggaagacgatggtgtttaacgtcatggatacgccaggacacgtg
aattttagcgatgaagtgacggcatcgatgcggttggcggatggagtgttgcttgtcgtc
gatgcgtgcgaaggtgttatgacttcgacgacgcgacaaatcaagcacgcggcgcgagac
ggtttgcccgtgtgcgtcttcatatcgaagattgatcgcttgattgtcgagctcaagctt
ccgcccgcggatgcctatcacaagctccgtcacacgatcgaagaaatcaacggcttgatc
gagacgttttacacaccagacgccgacggagctctgccgacggtgagtccggaaaacggc
aaggtttgctttgggagcgctttgtacggatttagtttcaccttagaatcgttcgccaaa
ctctacgtcgatgtgaacggcgtgttagtcgatcataaggagttcgcaaagaggatgtgg
ggcgatgtgtattatcacggcgatacgcggatgttcaagaagaagccaccgccgggcggc
ggcgagcgcaccttcgtgcagttcatcctcgaaccgttgtacaaagttttcagccaagtt
gtcggtgaaactattgacagcgtgtctgataagttgaaggaatttggcatcaaactgaag
ccaaaggagacgaaagcaaacacgaagccgctgctcaagatgacgtgccagaagattttc
ggcgccgcgtctgggctggcggatatgctcgccgcacacatcccgacggcggaagaaggc
gcggctatgaagattgagcgcgcttacagcggcccggtaaagaacggtggcaaactcgtc
gatgcaatgcgggcgtgtgacccggacgcaccagccgtggtgatggtttccaaactcatc
ccaaaaagcgattgctcggcgttcgacgcgctcggtcgcgtgatgtgcgggacgcttagg
aagaacgatcgcgttcgtgttctcggcgaaaacttctccccagatgacgaagaagacagc
gtggtgaagaatgtgacgaatatgtggatatatgaagcgcgttatcgtattcccatcaag
gaagcgcgcgcgggcgcttgggtcctcatcgaaggcatagaccaaagcatcaccacaact
gccacgttggtaccggagaagatgccgaaagggtacgacgacgacttgtacgctttcaaa
ccgttagagttcgataacaaatcggtgatgaagatcgctgcggagcctctcaacccgagc
gacttgccgaaaatggttgaaggtttacgcaagattaccaaatcctaccccgcctgcgtg
accaaggttgaggaaagcggcgaacacacaatcatgggcacgggggagttgtttttagat
agcgtaatgaaggatctccgagaaatgtacagcgaaatcgaggtcaaggtgagtgatcct
gtggtttgctttaacgaaaccgtcgtggagacgagctcgctcaagtgctacgcggagacg
ccgaacaaaaagaacaaactcacgatgatcgccgagcccctcgacaagggacttgcgcga
gatatcgagaccggcaaagtcaatttgagtgcgccgaagaaacaggtgagcgatttcttc
aagtcagagtacgagtgggacgcgctcgctgcgaagagtgtctgggcgtttggccccgac
gcggccggccccaacgcgttgttggacgacactttgccgtccgaagtcgacaaaggattg
cttgcggcgattcgtgactccgttgtacaaggattccagtggggcacgcgcgagggtccg
ctgtgcgatgagcctatccgcgaggtcaagttcaaaattttagacgccgtcgtcgccgac
gccccgcttcagcgagggggcgggcaaatcatccccaccgcgcgtcgctgcgcgtacagc
gccttcctcatggccactccgcgattgatggagcccatttacgaagttgagatccaatct
cccgccgattgcatgagcgccatctacaccgtgctcagtaaacgtcgcggacacgtcgtc
agcgatgccccaaaacctggcacccccgtgtacaccgtcaaggcgctcatccccgccatc
gaaacctttggtttcgagaccgacctgcgctaccacacccaaggccaagccttcggtcag
tcctacttcgaccactgggccgtcgttccgggcgatcctctcgacaagaccgtcgtgttg
cgtcccctcgaacccgcccccgtccctcacctcgctcgcgagttcatggtcaagacgcgt
cgtcgcaagggcatgtccgaagacgtcaccgtgagtaaattcttcgacgacgatttgctc
atcgagctcgcgcaggccgacaccgagctcgcgggtctattttag
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integrated database retrieval system
