KEGG   Ostreococcus lucimarinus: OSTLU_36534
Entry
OSTLU_36534       CDS       T01029                                 
Symbol
CHR3501
Name
(RefSeq) predicted protein
  KO
K15083  DNA repair protein RAD16
Organism
olu  Ostreococcus lucimarinus
Brite
KEGG Orthology (KO) [BR:olu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:olu03400]
    OSTLU_36534 (CHR3501)
DNA repair and recombination proteins [BR:olu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     NER4 complex
      OSTLU_36534 (CHR3501)
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C zf-RING_2 ResIII zf-RING_5 zf-C3HC4 zf-RING_11 zf-rbx1 zf-RING_UBOX zf-ANAPC11 DEAD U-box_ZFPL1 zf-C3HC4_2 zf-C3HC4_3 zf-Nse zf-TFIIIC zf-RING_Vps41 PHD_NSD PgaD ERCC3_RAD25_C RING_XB3-XBAT31
Other DBs
NCBI-GeneID: 5006947
NCBI-ProteinID: XP_001422798
JGI: 36534
UniProt: A4SBM4
LinkDB
Position
21:join(64360..65103,65716..67392)
AA seq 806 aa
MHPECYRAEGVTREELETRVHGLDALKDGDREVLLATVLSPDRPEIENTALDVTSEEFLR
RPAVEPMEAPRALTRPLLGFQREGLRWMCDNESGDAKGGILADEMGMGKTIQCISMLLAR
KEAWMRDRAEVGEMVTDDDRPPPTLVVVPTSALVQWEEEIKSCVEEGSLRVFVYYADRAN
VVEGDFKGYDVVLTTYPVVEAEWRKIINRHLTACQWCGKKYLPRSMVTHLKYFCGPDAVR
TEKLARREKKKKTPAKTEEADDVKASNIDDIPQTSQGGSQGGSQFEDEDDVDLSDSLLHR
TQWHRIVLDEAHKIKARTSNTAKCIYALKSTYKWCLTGTPLQNRIGDLYSLVRFLRMDPY
AFYFCSTKGCECKTLTWNFGPQARFCTNCGCGAPRHYSHFNRTVLNPINRYGYIGDGKKA
MLTLRNDILLPMQLRRTKAERAEDVRLPDLKIIIQENTFNEVEQDFYESLYMLTRSKFDA
FVKKGSVLHNYAHVFELLARLRQACDHPYLVIHSKSANVKKDAPDAPKVESPADTDVPKH
YCGMCQDEIEEEDAALANCKHIFHRECIMQYASCAPADGKKVTCPVCRTALTIDFSPESL
ENVKSAISRNFKDALPDKSILNKLDLTQYTSSTKVETLVNALRDMRNQENGHLNKAIVFS
QYTAMIEIVEWRLKKAKFTIAKLLGSMPVTQRAANLQAFREDPNVSVILMSLKSGGEGLN
LQAANYVYVLEPWWNPAVEMQAVMRAHRIGQLRPVTAVRFSTKGTIEERMMELQEKKQLV
FEGCMDGNQAALSQLTAEDLQFLFKR
NT seq 2421 nt   +upstreamnt  +downstreamnt
atgcatccggagtgttatcgcgcggagggagtcacgagggaggagctggagacgcgcgtg
cacgggttggacgcgctgaaggatggggatcgggaggtgttgctggcgacggtgctgtcg
ccggatcggccggagatcgagaacacggcgttggacgtgacgagcgaggagtttttgcgt
cggccggcggtggaaccgatggaggcgccgcgggcgttgacgcggccgttgttggggttt
cagcgcgaggggttgcggtggatgtgcgataacgagagcggcgatgcgaagggggggata
ttggcggatgagatggggatggggaagacgatacagtgcatatcgatgttgctggcgagg
aaggaggcgtggatgcgagaccgcgccgaggtgggggagatggtgacggacgacgacaga
ccgccgccgacgctcgtggtggtgccgacgtcggcgctcgttcagtgggaagaagagatc
aaatcgtgcgtcgaggaagggtcgctgcgcgtgtttgtgtattacgctgatcgcgcaaac
gtcgtggaaggagactttaaaggatacgacgtcgtgttgacgacgtatcccgtcgtcgaa
gccgagtggcggaaaatcatcaaccgacacttgacggcgtgtcagtggtgtgggaaaaag
tacttacctcgctccatggtgacgcacttgaagtacttctgtggaccagacgccgtgcgc
acggaaaaactcgcgcggcgcgagaagaaaaagaaaacgccggcgaaaaccgaggaagcg
gacgacgtgaaggcgtccaacatcgacgacattccgcaaacctcgcaaggtggttcgcaa
ggtgggagccagtttgaagacgaagacgacgtagatttgtcggattcccttcttcatcgc
acgcagtggcaccgaatcgttctcgacgaagcgcacaagatcaaggcgcgcacgagcaac
accgccaagtgtatctacgctttgaaatccacgtataagtggtgtttgacaggtacaccg
ttgcagaatcgaatcggcgatctttacagcttggtgagatttttgcgtatggatccgtac
gcgttttacttttgttcgacgaagggttgcgagtgcaaaacgctcacctggaacttcggt
cctcaggcgcgattttgtaccaactgcggatgcggcgctcctaggcattattcgcatttc
aatcgcaccgtgctaaacccgatcaaccgttatggctacatcggtgacggcaagaaagcg
atgctgactcttagaaatgacattttgttgccgatgcaacttcgccggaccaaggcggaa
cgcgccgaggacgtgcgactgccggacttgaagattatcattcaagaaaacacattcaat
gaggttgaacaagacttttacgagtctctgtacatgctgacgcgctcgaagttcgacgcg
ttcgtgaagaaagggagcgttttgcacaactacgcacacgtcttcgagctcctcgcacga
ctgcgacaagcgtgcgatcatccgtacttggtgattcattcgaagagtgcgaacgtgaaa
aaagacgcccctgacgcgccgaaagttgaatccccggcagacaccgacgttccgaagcat
tattgtggcatgtgtcaggacgaaattgaggaagaagacgcggctctggcgaattgcaaa
cacattttccatcgtgagtgcatcatgcaatacgcgtcttgtgcgcctgcggatggcaaa
aaagtgacttgtcccgtctgtcgcacggcgttgacgattgacttctctccagaaagtctc
gaaaacgtcaagagtgccattagtcgtaatttcaaggatgcgctaccagacaagtcaatt
ctcaacaagctcgatctcacgcagtacacgtcgagcacaaaggttgagacgctcgttaac
gctctgcgagacatgcgtaatcaagaaaatgggcacttaaacaaagccatcgtgttttcg
cagtacacagccatgatagaaatcgtcgaatggcgtttgaaaaaggccaagtttaccatc
gccaagcttctcggttccatgccggtcacgcaacgcgcggcgaatttgcaagctttccga
gaagatccaaacgtcagcgtgatcttgatgagtctcaaatctggcggtgaaggactcaac
ttgcaagcggcgaattacgtatacgttcttgagccatggtggaacccagcggtggaaatg
caagccgtgatgcgcgcacatcgcatcgggcagcttcgaccggtgaccgctgttcgattt
tcgaccaaaggcacgattgaagaacgcatgatggagcttcaagaaaagaagcagcttgtg
ttcgaagggtgtatggacggcaatcaagccgcgctttctcaactgactgccgaagacttg
caatttttgttcaagcgatga

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