Ostreococcus lucimarinus: OSTLU_36534
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Entry
OSTLU_36534 CDS
T01029
Symbol
CHR3501
Name
(RefSeq) predicted protein
KO
K15083
DNA repair protein RAD16
Organism
olu
Ostreococcus lucimarinus
Brite
KEGG Orthology (KO) [BR:
olu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
olu03400
]
OSTLU_36534 (CHR3501)
DNA repair and recombination proteins [BR:
olu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
OSTLU_36534 (CHR3501)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
zf-RING_2
ResIII
zf-RING_5
zf-C3HC4
zf-RING_11
zf-rbx1
zf-RING_UBOX
zf-ANAPC11
DEAD
U-box_ZFPL1
zf-C3HC4_2
zf-C3HC4_3
zf-Nse
zf-TFIIIC
zf-RING_Vps41
PHD_NSD
PgaD
ERCC3_RAD25_C
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
5006947
NCBI-ProteinID:
XP_001422798
JGI:
36534
UniProt:
A4SBM4
LinkDB
All DBs
Position
21:join(64360..65103,65716..67392)
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AA seq
806 aa
AA seq
DB search
MHPECYRAEGVTREELETRVHGLDALKDGDREVLLATVLSPDRPEIENTALDVTSEEFLR
RPAVEPMEAPRALTRPLLGFQREGLRWMCDNESGDAKGGILADEMGMGKTIQCISMLLAR
KEAWMRDRAEVGEMVTDDDRPPPTLVVVPTSALVQWEEEIKSCVEEGSLRVFVYYADRAN
VVEGDFKGYDVVLTTYPVVEAEWRKIINRHLTACQWCGKKYLPRSMVTHLKYFCGPDAVR
TEKLARREKKKKTPAKTEEADDVKASNIDDIPQTSQGGSQGGSQFEDEDDVDLSDSLLHR
TQWHRIVLDEAHKIKARTSNTAKCIYALKSTYKWCLTGTPLQNRIGDLYSLVRFLRMDPY
AFYFCSTKGCECKTLTWNFGPQARFCTNCGCGAPRHYSHFNRTVLNPINRYGYIGDGKKA
MLTLRNDILLPMQLRRTKAERAEDVRLPDLKIIIQENTFNEVEQDFYESLYMLTRSKFDA
FVKKGSVLHNYAHVFELLARLRQACDHPYLVIHSKSANVKKDAPDAPKVESPADTDVPKH
YCGMCQDEIEEEDAALANCKHIFHRECIMQYASCAPADGKKVTCPVCRTALTIDFSPESL
ENVKSAISRNFKDALPDKSILNKLDLTQYTSSTKVETLVNALRDMRNQENGHLNKAIVFS
QYTAMIEIVEWRLKKAKFTIAKLLGSMPVTQRAANLQAFREDPNVSVILMSLKSGGEGLN
LQAANYVYVLEPWWNPAVEMQAVMRAHRIGQLRPVTAVRFSTKGTIEERMMELQEKKQLV
FEGCMDGNQAALSQLTAEDLQFLFKR
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgcatccggagtgttatcgcgcggagggagtcacgagggaggagctggagacgcgcgtg
cacgggttggacgcgctgaaggatggggatcgggaggtgttgctggcgacggtgctgtcg
ccggatcggccggagatcgagaacacggcgttggacgtgacgagcgaggagtttttgcgt
cggccggcggtggaaccgatggaggcgccgcgggcgttgacgcggccgttgttggggttt
cagcgcgaggggttgcggtggatgtgcgataacgagagcggcgatgcgaagggggggata
ttggcggatgagatggggatggggaagacgatacagtgcatatcgatgttgctggcgagg
aaggaggcgtggatgcgagaccgcgccgaggtgggggagatggtgacggacgacgacaga
ccgccgccgacgctcgtggtggtgccgacgtcggcgctcgttcagtgggaagaagagatc
aaatcgtgcgtcgaggaagggtcgctgcgcgtgtttgtgtattacgctgatcgcgcaaac
gtcgtggaaggagactttaaaggatacgacgtcgtgttgacgacgtatcccgtcgtcgaa
gccgagtggcggaaaatcatcaaccgacacttgacggcgtgtcagtggtgtgggaaaaag
tacttacctcgctccatggtgacgcacttgaagtacttctgtggaccagacgccgtgcgc
acggaaaaactcgcgcggcgcgagaagaaaaagaaaacgccggcgaaaaccgaggaagcg
gacgacgtgaaggcgtccaacatcgacgacattccgcaaacctcgcaaggtggttcgcaa
ggtgggagccagtttgaagacgaagacgacgtagatttgtcggattcccttcttcatcgc
acgcagtggcaccgaatcgttctcgacgaagcgcacaagatcaaggcgcgcacgagcaac
accgccaagtgtatctacgctttgaaatccacgtataagtggtgtttgacaggtacaccg
ttgcagaatcgaatcggcgatctttacagcttggtgagatttttgcgtatggatccgtac
gcgttttacttttgttcgacgaagggttgcgagtgcaaaacgctcacctggaacttcggt
cctcaggcgcgattttgtaccaactgcggatgcggcgctcctaggcattattcgcatttc
aatcgcaccgtgctaaacccgatcaaccgttatggctacatcggtgacggcaagaaagcg
atgctgactcttagaaatgacattttgttgccgatgcaacttcgccggaccaaggcggaa
cgcgccgaggacgtgcgactgccggacttgaagattatcattcaagaaaacacattcaat
gaggttgaacaagacttttacgagtctctgtacatgctgacgcgctcgaagttcgacgcg
ttcgtgaagaaagggagcgttttgcacaactacgcacacgtcttcgagctcctcgcacga
ctgcgacaagcgtgcgatcatccgtacttggtgattcattcgaagagtgcgaacgtgaaa
aaagacgcccctgacgcgccgaaagttgaatccccggcagacaccgacgttccgaagcat
tattgtggcatgtgtcaggacgaaattgaggaagaagacgcggctctggcgaattgcaaa
cacattttccatcgtgagtgcatcatgcaatacgcgtcttgtgcgcctgcggatggcaaa
aaagtgacttgtcccgtctgtcgcacggcgttgacgattgacttctctccagaaagtctc
gaaaacgtcaagagtgccattagtcgtaatttcaaggatgcgctaccagacaagtcaatt
ctcaacaagctcgatctcacgcagtacacgtcgagcacaaaggttgagacgctcgttaac
gctctgcgagacatgcgtaatcaagaaaatgggcacttaaacaaagccatcgtgttttcg
cagtacacagccatgatagaaatcgtcgaatggcgtttgaaaaaggccaagtttaccatc
gccaagcttctcggttccatgccggtcacgcaacgcgcggcgaatttgcaagctttccga
gaagatccaaacgtcagcgtgatcttgatgagtctcaaatctggcggtgaaggactcaac
ttgcaagcggcgaattacgtatacgttcttgagccatggtggaacccagcggtggaaatg
caagccgtgatgcgcgcacatcgcatcgggcagcttcgaccggtgaccgctgttcgattt
tcgaccaaaggcacgattgaagaacgcatgatggagcttcaagaaaagaagcagcttgtg
ttcgaagggtgtatggacggcaatcaagccgcgctttctcaactgactgccgaagacttg
caatttttgttcaagcgatga
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