Ostreococcus lucimarinus: OSTLU_40034
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Entry
OSTLU_40034 CDS
T01029
Name
(RefSeq) ABC(ATP-binding) family transporter
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
olu
Ostreococcus lucimarinus
Pathway
olu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
olu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OSTLU_40034
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
olu03019
]
OSTLU_40034
Messenger RNA biogenesis [BR:
olu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
OSTLU_40034
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
AAA_23
AAA_28
AAA_15
RsgA_GTPase
AAA_22
TsaE
nSTAND3
AAA
AAA_14
ORC-CDC6-like
SRP54
Motif
Other DBs
NCBI-GeneID:
4999448
NCBI-ProteinID:
XP_001415775
JGI:
40034
UniProt:
A4RQQ3
LinkDB
All DBs
Position
1:complement(230789..231871)
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AA seq
360 aa
AA seq
DB search
MANAKAKADADPDAPKPWLRKPGRDATERAERAPVKTAEVVSIDGPGIEVRGLTFSYPGL
DGSPLAGTTPLIRDMRLRLAPGTCTLLLGANGAGKTTLLKILAGKHLVPRERVLVLGREA
FYDTGLTSSGDLSFIGGNWQRDVAFAGYNIPLAGDFPASRMLDSIPGVDPARKQRIIEVL
DVDVNWRMHKVSDGQRRRVQLAWGLMLPYKVLLLDEITVDLDVLGRAELMSFLRSECIER
QVTIVYATHIFDGLESFMSHVAFVANGELKFCKKFEDIEGLKDREPGSLLATVEGWLREE
YVLQRERKALEKKEKKDFQFNRNNGWAAGRTTSTVTFGPTLDQTRNHTGIAGSSNAVMRN
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgcgaaggcgaaggcggacgccgaccccgacgcgccgaaaccgtggctgcga
aaacccggtcgcgacgccaccgaacgcgcggagcgggcgccggtgaaaacggcggaggtg
gtctcgatcgatggacccgggatcgaggttcgagggctgacgttcagttatccgggattg
gacgggtcgccgctcgcggggacgacgccgttgattcgggacatgcggctgcgactggcg
ccggggacgtgcacgctgttgttgggagcgaacggggcgggaaagacgacgctgctgaag
attttggctgggaaacacttggtgccgcgggaaagggtgctggtgctgggacgggaggcg
ttttacgatacgggattgacgtcgagcggggacttgagtttcatcggcggaaactggcag
cgggacgtggcgttcgcggggtataatattccgctcgcgggggatttcccggcgagtcgg
atgttggattccattccaggggtcgatccagcgcggaaacagcgcatcatcgaagtgctg
gacgtggacgtgaactggcgaatgcacaaggtgagcgacggacagcgaagacgcgtgcag
ctcgcgtggggattgatgttgccgtataaggttttgttgctcgatgagatcacggtggat
ttagacgtgctcggtcgcgcagaattaatgtcgttcttgcgaagcgagtgcatcgagcgt
caggtcaccatcgtgtacgcgacgcacattttcgatggcctcgaatccttcatgtcgcac
gtggcgtttgtcgccaatggcgagttgaaattttgcaaaaagtttgaagatattgaaggc
ttaaaggaccgcgagcccggttctttgctcgccaccgtcgagggatggcttcgcgaagag
tacgtgctccagcgcgagcgcaaagcgttggaaaagaaggagaagaaggacttccaattt
aaccgtaacaacggatgggccgccggtcgaacgactagcaccgttacgttcggtccgacg
ctcgatcaaaccaggaatcacacgggcatcgccggatcctccaacgccgtcatgcgcaac
taa
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integrated database retrieval system
