Oenanthe melanoleuca (Eastern black-eared wheatear): 130248453
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Entry
130248453 CDS
T09236
Symbol
TRPC6
Name
(RefSeq) short transient receptor potential channel 6
KO
K04969
transient receptor potential cation channel subfamily C member 6
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Pathway
oma04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
130248453 (TRPC6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oma04040
]
130248453 (TRPC6)
Ion channels [BR:
oma04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
130248453 (TRPC6)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
Ank_4
Ank_5
Cas8b_C
Cmr1_C
Motif
Other DBs
NCBI-GeneID:
130248453
NCBI-ProteinID:
XP_056338196
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Position
1:complement(39172044..39247704)
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AA seq
895 aa
AA seq
DB search
MSQAQPYGPRKGSSPAPGARRNDSQDYLLLDAELCEESALPPYAFYPVRGSENRLALRRQ
TILREKGRRQASRGPAYMFNDHSTSLSLEEERFLDAAEYGNIPVVRKMLEECPSLNVNCV
DYMGQNALQLAVANEHLEITELLLKKENLARVGDALLLAISKGYVRIVEAILSHPAFAEG
KRLALSPSQSELQHDDFYAYDEDGTRFSHDVTPIILAAHCHEYEIVHTLLRKGARIDRPH
DYFCKCAECSQKQKHDSFSHSRSRINAYKGLASPAYLSLSSEDPVMTALELSNELAVLAN
IEKEFKNDYKKLSMQCKDFVVGLLDLCRNTEEVEAILNGDVEMSHNNGEHGRPSLSRLKL
AIKYEVKKFVAHPNCQQQLLSIWYENLSGLRQQTMAVKFLVVLAVAVGLPFLSMAYWIAP
CSKLGRIMRGPFMKFVAHAASFTIFLGLLVMNAADRFDGTKLRPNETTDNVKQLFRMKTS
CFSWMEMLIISWVVGMIWSECKEIWSQGPKEYLFELWNMLDFGMLAIFAASFIARFMAFW
HASRAQNIVDANMKDLTSPTLEPNIKYYTLARINWDPSDPQIISEGLYAIAVVLSFSRIA
YILPANESFGPLQISLGRTVKDIFKFMVIFIMVFVAFMIGMFNLYSYYLGAKQNEAFTTV
EESFKTLFWAIFGLSEVKSVVINYKHKFIENIGYVLYGVYNVTMVIVLLNMLIAMINSSF
QEIEDDADVEWKFARAKLWFSYFEEGRTLPVPFNLVPSPKSLLYLLIRIKKCISKPFLCQ
KKSFQEDAEMNKLGQRKQSSIRSSDEIHLNSLNNPPRQYQKIMKRLIKRYVLKAQIDKES
DEVNEGELKEIKQDISSLRYELLEEKSQNSEDLAELIRKLGEKLSLDSKEEESKR
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atgagccaggcgcagccctacggcccgcgcaagggcagctccccggcgccgggggcccgg
cggaacgacagccaggactacctgctgctggacgcggagctgtgcgaggagagcgccctg
ccgccctacgccttctaccccgtgcggggcagcgagaacaggctggcgctgcggcggcag
accatcctgcgggagaagggcaggaggcaggccagccgggggccagcctacatgttcaat
gaccactccaccagcctgtccctggaggaggagcgcttcctggacgccgccgagtacggc
aacatccccgtggtgcgcaagatgctggaggagtgcccctcgctcaacgtgaactgcgtg
gactacatggggcagaacgcgctgcagctggcggtggccaacgagcacctggagatcacc
gagctgctgctgaagaaggagaacctggcccgggtgggcgacgccttgctgctggccatc
agcaagggctacgtccgcattgtggaggccatcctgagccaccccgccttcgccgagggc
aagcggctggcgctgagccccagccagtcggagctgcagcacgacgacttctacgcgtac
gacgaggacgggacgcgcttctcgcacgatgtcacccccatcatcctggccgcgcactgc
cacgagtacgagatcgtgcacacgctgctgcgcaagggagcgcgcatcgaccggccccac
gactacttctgcaagtgcgccgagtgcagccagaagcagaagcacgactccttcagccac
tccaggtccaggatcaacgcctacaaaggcctggccagccccgcctatctgtctctgtcc
agcgaagaccctgtcatgactgccttagagctcagcaatgagctggccgtgctggccaac
atcgaaaaagagttcaagaatgattacaagaaactgtctatgcaatgcaaagattttgta
gttggactgcttgatttgtgcagaaatacagaagaagtggaagctattttgaatggtgat
gtagagatgagccataataatggagagcatggtcgtcccagcctcagccgcttaaaactc
gccatcaagtacgaagttaaaaaatttgtagcacatccaaactgccagcagcagctcctc
tcgatttggtacgagaatttgtcgggcttgcggcagcagacgatggcagtgaagtttctg
gttgtccttgcagttgcagtgggactgcccttcctctccatggcctattggattgctcct
tgcagtaagctggggaggataatgcgtggaccattcatgaagtttgtagctcatgcagcc
tctttcaccatttttcttggtctgcttgtcatgaatgcagctgacaggtttgatggcacc
aagctccgacctaatgaaacaacagacaatgtaaaacagctttttaggatgaaaacatct
tgtttctcgtggatggagatgcttattatttcttgggtagtaggcatgatatggtctgaa
tgtaaagaaatttggtctcaaggtccaaaggaatacctgtttgagttatggaatatgctt
gattttggtatgttagcaatttttgcagcatcatttatagcaaggtttatggcattttgg
catgcatccagagcccagaacatcgttgatgcaaatatgaaagatctgacaagtccaaca
ctggagcccaacataaaatactacaccttggccagaataaactgggatccctctgatcct
cagatcatttctgaagggctgtatgcaattgcagtggtgctaagtttctcacggatagcc
tacatcttaccagctaatgaaagctttggaccactgcagatatcacttgggagaaccgtg
aaagacatcttcaagttcatggtgatatttatcatggtctttgtggctttcatgataggc
atgtttaatctctattcctactatctgggggcaaaacagaatgaagccttcacaactgtt
gaagaaagtttcaaaacattgttctgggctatatttggactctcagaagttaaatcagtt
gttatcaattataaacacaaatttattgaaaatattggttatgttctttatggagtctat
aatgttaccatggtcatcgtgttgctgaacatgcttatcgcaatgatcaacagttcattc
caggaaattgaggatgatgctgatgtagaatggaaatttgcaagggctaaactttggttt
tcttactttgaagaagggagaactcttccagtacccttcaacttagtgccaagcccaaaa
tctttgttgtatctcctaatcagaatcaaaaaatgcatttctaaaccatttttgtgccaa
aagaaaagctttcaggaagatgcagagatgaacaagcttggtcaaaggaagcaatcaagt
ataagaagctcagatgaaatccacttaaacagtttaaacaatcctccaagacaataccag
aaaataatgaagcgtcttataaaaagatacgtgttgaaagctcagatagataaggaaagt
gatgaagtcaatgaaggtgaattgaaggaaattaaacaggacatctcaagtctccggtat
gaacttcttgaggaaaaatctcagaattctgaagatctggcagaactcataaggaaactt
ggggaaaaactgtcacttgactctaaggaagaagaaagcaagagataa
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