Oenanthe melanoleuca (Eastern black-eared wheatear): 130253482
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Entry
130253482 CDS
T09236
Symbol
KDM2A
Name
(RefSeq) lysine-specific demethylase 2A
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Pathway
oma03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
130253482 (KDM2A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oma03000
]
130253482 (KDM2A)
04121 Ubiquitin system [BR:
oma04121
]
130253482 (KDM2A)
03036 Chromosome and associated proteins [BR:
oma03036
]
130253482 (KDM2A)
Enzymes [BR:
oma01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
130253482 (KDM2A)
Transcription factors [BR:
oma03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
130253482 (KDM2A)
Ubiquitin system [BR:
oma04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
130253482 (KDM2A)
Chromosome and associated proteins [BR:
oma03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
130253482 (KDM2A)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
130253482 (KDM2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JHD
F-box
JmjC
Cupin_8
LRR_4
Motif
Other DBs
NCBI-GeneID:
130253482
NCBI-ProteinID:
XP_056348045
LinkDB
All DBs
Position
5:8686521..8720270
Genome browser
AA seq
1208 aa
AA seq
DB search
MAAAAPVRGQRRRRDLEEEDDDSSPGVSFSLSSEESEMEPEEERIRYSQRLRGTMRRRYE
DDGISDDEIEGKRTFDLEEKLSTNKFNSTFVVFMEGKDFTVEYIQRGGLRDPLIFRSSDG
LGIKMPDPDFSVNDVRLCVGSRRIVDVMDVNTQRDIEMSMAQWARYYETPEEDREKLYNV
ISLEFSHTKLENLVQRPATVDLIDWVDNMWPRHLKESQTESTNAILEMQYPKVQKYCLMS
VKGCYTDFHVDFGGTSVWYHIHRGGKIFWLIPPTPQNLELYENWLLSGKQGDIFLGDRVS
ECQRIELKQGYTFVIPSGWIHAVYTPMDTLVFGGNFLHSFNIPMQLRIYSIEDRTRVPNK
FRYPFYYEMCWYVLERYVYCITSRSHLTKDFQKESLSMDMELSSSDSVNMEEEEEEEDDD
EDAAGKESRRPMTRRSILTSPIANGASVDYDELGKSCRSSLPGLKKTPSIDSSDSSRGSQ
NGQAWDPSGGSPRKSRKVHLTQFELEGLRCLVDKLESLPLHKKCVPTGIEDEDALIADVK
LLLEEYANSDPKLALTGVPIVQWPKRDKLKLQARLRVRLPTIPITKPHTMKPAPRLTPVR
STVSPIVSGARRRRVRCRKCKACMQGECGMCHYCRDMKKFGGPGRMKQSCVLRQCLAPRL
PHSVTCALCGEVDQNEDSQDFEKKLMECCICNEIVHPGCLQMDGEGLLNDELPNCWECPK
CYQGDDTEKGQKRKVEESDDDTAQAKVLRPLRSCEEPLTPPPNSPTPMLQLIHDPASPRG
VVTRSSPGAGPSDHHSASRDERFKRRQLLRLQATERTMVREKENNPSGKKELSEVEKAKL
HGSYLTVTLQRPTKDVHGTSIVPKLQAITASSANLQHSPRVVVRHAPTRMPLRSGGDEEA
AAEEEEEEEDEEEENAEEGGAARLNGRGGRAQEGEESCVQREVWMSVFRYLTRRELCECM
RVCKTWYKWCCDKRLWTKIDLSRCKSITPQALSGIIKRQPVSLDLSWTNISKKQLTWLVN
RLPGLKDLILAGCSWSAVCALSTSSCPLLRTLDLRWAVGIKDPQIRDLLTPPTDKPSQDN
RSKLRNMIDFRLAGLDITDATLRLIIRHMPLLSRLDLSHCNHLTDQSANLLTAVGSSTRN
SLTELNMAGCNKLTDQALLYLRRISNVTLIDLRGCKQITRKACEHFISDLSINSLYCLSD
EKLIQKIS
NT seq
3627 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggctcctgtaagaggacaaaggcgcaggagagacctggaggaagaggac
gacgacagcagtcctggtgtgtccttctcgctctcttctgaggagtcggagatggagccc
gaggaagagcggatccgttacagccaaagactgcgtggcacgatgaggcggcgttacgag
gacgacggtatctctgatgatgagattgaagggaagaggacatttgacctcgaggaaaag
ctgtccactaacaagttcaactctaccttcgtggtcttcatggaaggcaaagacttcaca
gttgagtacatccagcggggtggcctgagggacccactcatcttcaggagctcggacggc
ctggggataaagatgccggatccggacttcagcgtgaacgatgtgcggctgtgtgtaggg
agccgacggatagtggatgtgatggatgtgaacacgcagcgggacatcgagatgtccatg
gcgcagtgggcgcgctactatgaaacgccggaggaggatcgggagaaactctacaacgtc
atcagcctggagttcagccacaccaagctggagaacctggtgcagagacctgccacggtg
gatttaattgactgggttgataacatgtggcccaggcacctgaaggaaagtcagacagag
tctaccaatgccatcttggagatgcagtatccaaaggtgcagaagtactgtttgatgagt
gtcaagggctgctacacagatttccacgtggacttcggtggcacttctgtgtggtaccac
atccaccgagggggaaagatcttctggctgatccctcccacaccccagaacctggagctc
tatgaaaactggcttctctcagggaagcagggagacattttccttggggacagagtgtca
gagtgccagcgcatcgagctcaagcagggctacacatttgtcattccctcaggttggatc
catgctgtgtacactcccatggacacgctggtttttgggggcaacttcttacacagcttc
aacatccctatgcagctccggatctacagcatcgaggaccgtacacgggtcccaaataaa
tttcgttatcccttctattatgagatgtgttggtacgtgctggagcgctacgtgtactgc
atcaccagccgctcccacctgaccaaggacttccagaaggaatccctcagcatggatatg
gagctgagctcctcagactctgtgaacatggaagaggaggaggaggaggaagatgatgat
gaggacgcagcagggaaggaatcccggcgccccatgaccaggaggtccattctcaccagc
cccattgccaacggtgccagtgtggactatgacgaactgggcaagagctgccggagcagc
ctgccaggtctcaagaagaccccatccatagattcttccgactccagccggggctcccaa
aacggccaggcctgggacccgagcgggggcagcccccgcaagagcaggaaggtgcacctg
acccagtttgagctggaggggctgcgctgcctcgtggacaagctggagtcgctccctctg
cacaagaagtgtgttcccaccggcatcgaggacgaggacgccctcatcgctgacgtcaag
ctgctgttggaagaatacgcgaacagcgaccccaaactggcacttacaggtgtccccatc
gtccagtggcccaagagagataagctaaagctccaggcccggctgcgggtgcgcctgccc
accatccccatcaccaagccgcacaccatgaagccagcgcctcgcctgactcccgtcagg
tccacagtgtctcccatcgtgtcgggcgcccggcggagacgggtgcggtgccggaaatgt
aaggcctgcatgcagggcgagtgtggcatgtgccactactgcagggacatgaagaagttc
ggcgggcctggccgcatgaagcagtcgtgtgtcctccggcagtgcttggcgcccaggctg
cctcattcggtcacgtgtgcactttgcggggaggtggatcagaatgaggactcacaggac
tttgagaagaagctcatggagtgctgtatctgcaacgaaatcgttcaccctggttgtctg
cagatggatggggaagggcttctcaatgatgagctccccaactgctgggagtgtcccaag
tgctaccagggtgatgacacagagaagggccagaagcggaaggtggaggagagcgacgac
gacacggcgcaagccaaggtgctgcggcccctgcggagctgcgaggagcccctgaccccc
ccgcccaactcgcccaccccgatgctgcagctgatccacgaccccgcgtccccccgcggg
gtggtgacacgctcatccccgggcgccgggcccagcgaccaccacagcgccagccgggac
gagcgcttcaagcgccggcagctgctgcggctccaggccacagagagaaccatggtgcga
gagaaggagaacaaccccagcggcaagaaggagctgtcggaggtggagaaggccaagctg
cacggctcctacctcaccgtgacactccagcgccccaccaaagatgtccacggcacttcg
atcgtccccaagctccaagccatcacggcctcctcggccaacctgcagcactcgccgcgc
gtggtcgtgcgccatgcacccaccaggatgcccctgcggagtgggggcgatgaggaggcg
gctgctgaggaagaggaggaggaagaggacgaggaggaggagaacgcggaggaggggggg
gcagcccggctgaacgggcgcggaggtcgggcgcaggagggtgaggagagctgtgtccag
cgcgaagtctggatgtccgtgttccgctacctcacccgcagggagctctgcgagtgcatg
cgggtgtgcaagacctggtacaagtggtgctgtgacaagagattgtggacaaagatagac
ttgagcaggtgcaagtccatcaccccccaggcactgagcggcatcatcaaaaggcagccg
gtcagccttgacctcagctggaccaatatctcaaaaaaacagcttacatggctcgtcaac
aggctgccaggcctgaaagacctcatcctagcgggctgttcctggtctgcggtctgtgct
ctcagtacctccagctgcccccttctcaggaccctcgatcttcggtgggcagtaggaatc
aaggaccctcagatccgggacttactcacacctccaacagacaaacccagtcaggacaat
cgcagcaaactccgcaacatgatcgacttccggctcgctgggctggacatcacggacgcc
acgctgcgcctgatcatccgccatatgcccctgctctcccgcctcgacctcagccactgc
aaccacctcacggaccagtcggccaacctcctcaccgccgtgggctcctccacacgcaac
tccctcaccgagctcaacatggcaggctgcaataagctgacggaccaggccttgctgtac
ctgcgccgcatctccaacgtcaccctcatcgacctgcggggctgcaaacagatcacccgc
aaagcctgtgagcacttcatctcggacctgtccatcaacagcctctactgcctgtccgat
gagaagctgatccaaaaaatcagctag
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