Oenanthe melanoleuca (Eastern black-eared wheatear): 130253546
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Entry
130253546 CDS
T09236
Symbol
TRAF6
Name
(RefSeq) TNF receptor-associated factor 6
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Pathway
oma04010
MAPK signaling pathway
oma04120
Ubiquitin mediated proteolysis
oma04140
Autophagy - animal
oma04144
Endocytosis
oma04620
Toll-like receptor signaling pathway
oma04621
NOD-like receptor signaling pathway
oma04622
RIG-I-like receptor signaling pathway
oma05132
Salmonella infection
oma05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
130253546 (TRAF6)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
130253546 (TRAF6)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
130253546 (TRAF6)
04140 Autophagy - animal
130253546 (TRAF6)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
130253546 (TRAF6)
04621 NOD-like receptor signaling pathway
130253546 (TRAF6)
04622 RIG-I-like receptor signaling pathway
130253546 (TRAF6)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
130253546 (TRAF6)
09171 Infectious disease: bacterial
05132 Salmonella infection
130253546 (TRAF6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oma04131
]
130253546 (TRAF6)
04121 Ubiquitin system [BR:
oma04121
]
130253546 (TRAF6)
Enzymes [BR:
oma01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130253546 (TRAF6)
Membrane trafficking [BR:
oma04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
130253546 (TRAF6)
Ubiquitin system [BR:
oma04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
130253546 (TRAF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
TRAF6_Z2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-C3HC4_4
zf-TRAF_2
zf-RING_5
SlyX
PspA_IM30
Med21
Sina_ZnF
RING_XB3-XBAT31
TRAF3_RING
zf-RING_11
CEP104_ZnF
DUF16
DUF4455
CENP-F_leu_zip
HAP1_N
U-box
Myosin_tail_1
ATG16
HMMR_N
Spc29
UPF0242
DUF1664
PUMA_CC
ADIP
Motif
Other DBs
NCBI-GeneID:
130253546
NCBI-ProteinID:
XP_056348170
LinkDB
All DBs
Position
5:complement(19369698..19391438)
Genome browser
AA seq
538 aa
AA seq
DB search
MSLLHSDSSCGARDGDSGCCAAMAKEESCSTASASGSAGGSFADETQGYDVEFDPPLESK
YECPICLMALREAVQTPCGHRFCKGCIVKSIRDAGHKCPVDNEILLENQLFPDNFAKREI
LSLMVKCPNKGCSMKMELRHLEDHQLQCDFSTVECPQCQGAFPKNHLKEHMTQECPRRQV
CCPNCATSMAYEDKELHDQTCPLANVYCEYCNTVLIREQMPNHYDNDCPTAPVPCFYSAF
GCPEKMQRNELARHMQEFTQVHMRMMAQSFQNISVTAANPVPFINGLPFEPALFSHVSHA
AYDCNPEVENFKETIQQLEGRLVRQDHQIRELIAKMETQNTHMAELKRTIRSLEGKITEM
EAQQCNGIYIWKIENFSGLQRAQEEERPVVMHSPGFYTGRPGYKLCLRLHIQLPNAQRCA
NFISLFVHTMQGEYDSHLPWPFQGTIRLSILDQSEGPERQNHEEVMEAKPELLAFQRPTI
HRNPKGFGYVTFMHLQSLKQRAFVKDDTLLVRCEVLTRLDLNSARREGFQPRSTDGAV
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgctgcacagcgacagcagctgcggagcccgcgacggggacagcggctgctgc
gcggccatggccaaggaggagagctgcagcacggccagcgccagcggctccgccggcggc
tccttcgccgacgagacgcagggctacgacgtggagttcgacccgcccctggagagcaag
tacgagtgtcccatctgcctgatggcgctccgggaggcggtgcagaccccctgcggccac
cgcttctgcaagggctgcattgtcaaatccatcagagatgcaggtcacaaatgtcctgta
gacaatgaaattcttcttgaaaatcaactttttcctgacaactttgccaaacgggaaatc
ctttcattaatggtcaagtgtcccaacaagggctgcagcatgaagatggagctcaggcac
ttagaggaccaccagctgcagtgtgatttttccactgtggaatgccctcagtgccaagga
gctttcccaaagaaccatctgaaggagcacatgacccaagagtgtccaaggcgtcaagtg
tgttgcccaaactgtgccacatctatggcctatgaagataaagagcttcatgaccaaacc
tgcccacttgccaatgtatattgtgaatattgcaacacagtgctcatcagagagcagatg
cctaaccattatgacaatgattgtcctactgccccagtgccatgtttttacagtgccttt
gggtgtcctgaaaagatgcaaaggaatgaactggcacgacacatgcaggagttcactcag
gttcacatgaggatgatggctcagagtttccagaatatcagtgttactgctgcaaatcct
gtacccttcatcaatggcctaccttttgagcctgctctcttctcacacgtgtcacatgct
gcatatgactgcaatccagaagttgaaaacttcaaggaaaccattcagcagttggaaggt
cgtctggtaagacaagatcaccaaatcagggaactcattgctaaaatggagactcagaac
actcacatggcagaactcaagcgtaccatccgaagcttggagggaaagattaccgaaatg
gaggcgcagcaatgcaatggtatttatatctggaagattgagaacttcagcgggctgcag
agagcccaggaagaagagagacccgtggtgatgcacagtcctggcttctatacagggagg
cctggctacaagctgtgcttgcgcctgcatatccagttaccaaacgctcagcgctgcgct
aattttatctctctgtttgtccacactatgcaaggggagtatgacagccacctgccctgg
cctttccaaggcaccatacgactttctattttggatcaatcagaaggcccagaaaggcag
aaccacgaagaggtgatggaagccaagccagagctgctggccttccagagaccgacaatc
caccgcaatcccaaaggttttggttacgtgactttcatgcacctgcagagcttgaagcag
agagccttcgtcaaggacgacacgctgctggtgcgctgcgaggtgctgacgcgcctggac
ctgaacagcgcccgcagagaggggttccagccccgcagcaccgacggagccgtgtag
DBGET
integrated database retrieval system
