Oenanthe melanoleuca (Eastern black-eared wheatear): 130254031
Help
Entry
130254031 CDS
T09236
Symbol
TRAF3
Name
(RefSeq) TNF receptor-associated factor 3 isoform X1
KO
K03174
TNF receptor-associated factor 3
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Pathway
oma04620
Toll-like receptor signaling pathway
oma04621
NOD-like receptor signaling pathway
oma04622
RIG-I-like receptor signaling pathway
oma05164
Influenza A
oma05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
130254031 (TRAF3)
04621 NOD-like receptor signaling pathway
130254031 (TRAF3)
04622 RIG-I-like receptor signaling pathway
130254031 (TRAF3)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
130254031 (TRAF3)
05168 Herpes simplex virus 1 infection
130254031 (TRAF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
TRAF3_RING
zf-TRAF
zf-C3HC4
Cast
MPS2
zf-C3HC4_2
ATG16
CEP104_ZnF
Sina_ZnF
FliJ
Spc29
zf-RING_UBOX
Tropomyosin
KxDL
GAS
DUF1664
zf-RING_6
Crescentin
SPATA24
BLOC1_2
Motif
Other DBs
NCBI-GeneID:
130254031
NCBI-ProteinID:
XP_056349156
LinkDB
All DBs
Position
5:50631953..50702304
Genome browser
AA seq
567 aa
AA seq
DB search
MDTSKKSEPPLSVEMLQQRANPDRSPSASVYVPEQGGYKEKFVNAVEDKYKCEKCHLILC
NPKQTECGHRFCETCMNALLRSSSPKCTACQESIVKDKVFKDNCCRRELLALQIYCRNEN
KGCKEQLSLGQLLTHLRTDCQFEELPCPRADCKEKILRKDLPDHVEKTCKYRETTCKYCK
SQVPMIMLQKHEDTDCPCVMVSCPHKCSVKTLMRSELNAHLSECINAPSTCSFKRYGCTF
QGTNQQIKAHEASSAVQHVNLLKEWSNALENKVALLQNESLEKNKSIQTLHNQICSFEIE
IERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQNWEEADSMKSSVESLQNRV
TELESVDKTAGQGARNTSLLETQLSRHDQMLSVHDIRLADMDLRFQVLETASYNGVLIWK
IRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGE
YDALLPWPFKQKVTLMLMDQGPSRRHLGDAFKPDPNSSSFKKPTGEMNIASGCPVFVAQT
VLENGTYIKDDTIFIKVIVDTSDLPDP
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggacaccagtaagaagtcagaaccccctttatctgtagaaatgctgcagcagagggcc
aatcctgaccgcagcccatcagcatccgtctatgttccagagcaagggggctacaaagag
aaatttgtgaatgctgtggaagataagtacaaatgtgaaaaatgtcacctcatcttatgc
aatcctaaacagactgaatgtggacacagattctgtgaaacctgcatgaatgccttgctg
aggtcttctagtcccaaatgtacagcatgtcaagaaagcatagtaaaagataaggtattt
aaagataattgttgcaggagagaactacttgcccttcaaatatactgcagaaatgaaaac
aagggctgtaaggaacagctatctttgggtcaattactgacgcatttgagaactgattgt
cagtttgaagaactcccatgtcctcgtgctgattgcaaagaaaaaatactgagaaaagat
ttgccagaccatgtagagaagacctgtaaataccgggagacaacctgtaaatactgtaaa
agccaagtcccaatgattatgttgcagaaacatgaagatacagactgcccgtgtgtcatg
gtttcctgtccccataaatgcagtgtcaaaacactgatgaggagcgagttgaatgcacat
ttgtcagaatgtattaatgccccaagtacctgtagttttaagcgttatggctgcactttt
cagggaacaaaccaacaaattaaagcacacgaagccagctcagcagtgcagcatgttaac
ttattgaaagagtggagcaatgctctagaaaataaggtggccttgctccagaatgaaagt
ttggaaaagaacaagagtatacaaactttacataatcagatttgtagctttgaaatagaa
attgaaagacagaaggaaatgctgcggaataatgaatctaaaatacttcatttacagcga
gtgatagacagccaagcagagaaactcaaagaactggacaaagaaatccgtcccttccgg
cagaactgggaggaggctgacagcatgaagagcagcgtggagtccctccagaacagagtg
actgagctggaaagtgttgataaaactgcagggcaaggagctcggaatacaagcctgctg
gagacccagctgagcaggcacgaccagatgctgagcgtccatgacatccggctggctgac
atggacctccgcttccaggttctggaaaccgccagttacaacggagtgctgatctggaaa
atccgcgactacaaacggcggaagcaggaggcagtcatggggaagactctgtccctctac
agccagcccttttacactggatattttggctacaagatgtgtgccagagtttacctgaac
ggagatggcatgggaaaggggacgcacttgtctctgttttttgtcataatgcgtggagaa
tacgatgctttgcttccttggcccttcaagcagaaagtgactctcatgctcatggatcag
ggaccgtctcgacgccacttgggagatgctttcaagccagatccaaacagcagcagtttc
aagaagccaactggagaaatgaacattgcatctggctgcccagtctttgtggctcaaact
gttctagagaatggaacgtatattaaagatgatactatttttattaaagtcatagtggat
acatcggatctaccagacccctga
DBGET
integrated database retrieval system
