Oenanthe melanoleuca (Eastern black-eared wheatear): 130255658
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Entry
130255658 CDS
T09236
Symbol
RAPGEF4
Name
(RefSeq) rap guanine nucleotide exchange factor 4 isoform X1
KO
K04351
Rap guanine nucleotide exchange factor 4
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Pathway
oma04081
Hormone signaling
oma04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
130255658 (RAPGEF4)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
130255658 (RAPGEF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oma04131
]
130255658 (RAPGEF4)
Membrane trafficking [BR:
oma04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
130255658 (RAPGEF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
cNMP_binding
DEP
RasGEF_N
RA_2
RA
Motif
Other DBs
NCBI-GeneID:
130255658
NCBI-ProteinID:
XP_056352576
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All DBs
Position
7:complement(17146156..17286057)
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AA seq
1026 aa
AA seq
DB search
MVAAHASHSSSSSEWIACLDKRPLERSSEDVDIIFTRLKEVKAFEKFHPNLLQQICLCGY
YENLEKGITLFRQGDIGTNWYAVLTGSLDVKVSDTSNHQDAVTICTLGIGTAFGESILDN
TPRHATIVTREHSELLRIEQKDFKALWEKYRQYMSGLLTPPYGVMETGSNNDRMPDKDSM
SSSALCQVSKNCSKTPLIGPHIPHHPTKTITQVPSEKILRAGKILRNTILSRAPHMIRDR
KYHLKTYRQCCVGTELVDWMMQQSPCVHLRSQAVGMWQVLLEEGVLNHVDQEHHFQDKYL
FYRFLDDEREDAPLPTEEEKKECDEELQDTMLLLSQIGPDAHMRMILRKPPGQRTVDDLE
FIYEELLHIKALSHLSTTVKRELAGVLIFESHPKAGTVLFNQGEEGTSWYIILKGSVNVV
IYGKGVVCTLHEGDDFGKLALVNDAPRAASIVLREDNCHFLRVDKEDFNRILRDVEANTV
RLKEHDQDVLVLEKIPAGNRISNQGNSQPQHKYIVMSGTPEKILEHFLETMRLEATLNEA
TDSVLNDFIMMHCVFMPNSQLCPALMAHYHAQPSQGTEQEKVDYALNNKRRVIRLVLQWA
ALYGDLLQEDEAAMAFLEEFYVSVSDDTRMIAALKEQLPELEKIVKQISEEPKAPQKKHK
VLLQLFNTSDDRAQKRQPIRGNDEVLFKVYCIDQTYTTIRVPVSSSVKEVISAVADKLGS
GEGLIIVKMSSGGEKVVLKPHDVSVFTTLSVNGRLFACPRDQFDSLAPLPEQEGPSAGTV
GTFELMSSKDLAHQMTIYDWELFNCVHELELIYHTFGRHNFKKTTANLDLFLRRFNEIQF
WVITEICLCSQLSKRVQLLKKYIKIAAHCKEYKNLNSFFAIIMGLSNVAVSRLSLTWEKL
PSKFKKIYAEFESLMDPSRNHRAYRLTVAKLDPPIIPFMPLLIKDMTFTHEGNKTFTDNL
VNFEKMRMIANTVRTVKFCRSQSFNPDAALTNKNHQDVRSYVRQLNVIDNQRTLSQMSHR
LEPRRA
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atggtcgccgctcacgcctcccattcctcgtcctccagcgagtggatcgcgtgcctggat
aaaaggcctttggaacgttctagtgaagatgtagatataatattcacacgactgaaagaa
gtgaaagcttttgagaaatttcatccaaaccttctccagcagatatgtctctgtggatat
tatgagaatctggaaaaaggaatcacattattccgtcagggtgatattgggacgaattgg
tatgctgtcctgacaggatcactggatgtgaaggtgtctgatacaagcaaccaccaggat
gctgtgacaatatgcactcttggaataggaactgcttttggagagtccattctggataac
actcctcgccatgctaccattgttaccagggaacatagtgagctccttcgaattgagcag
aaggacttcaaagcactttgggagaaatatcgacagtatatgtctggacttctcactcct
ccttatggtgttatggaaactggctccaacaatgacagaatgccagataaagacagtatg
tcaagcagtgctctttgccaagtttctaaaaactgtagtaagacacctcttattggtcct
cacatcccacatcatcctactaaaaccattacacaggttccttcagaaaagatccttaga
gctggaaagattttgaggaatactattctgtcccgagctcctcacatgataagagatcgt
aaatatcatctgaagacttacaggcaatgctgtgtggggacagaactagttgactggatg
atgcaacaaagtccttgtgtccatttacgaagccaggctgtcggcatgtggcaagtactg
ctggaagaaggtgttcttaaccatgtggaccaggagcaccactttcaagacaaatactta
ttttatcgatttttggatgatgagcgtgaagatgcccctttgccaactgaggaagagaaa
aaggagtgtgatgaggagctacaggacactatgctgcttctctctcagattgggccagat
gctcatatgaggatgattctcaggaaaccccctggccagagaactgtagatgacttagaa
tttatatatgaagaacttctccacattaaggccttatctcatctttctaccacagtgaaa
cgagaattagcaggtgtcctcatttttgagtcacatcccaaagcaggaacagtcttattt
aatcagggagaagaaggtacttcttggtacattatcctaaagggatcagtaaacgtagtc
atttatggcaagggtgtggtatgtactctgcacgaaggagatgattttggcaaattggcg
ctcgtgaatgatgctcccagagcagcatccattgttctgagggaagacaattgccacttc
ttgagagtagataaggaggacttcaacaggatccttagggatgtggaagcaaatacagta
agactcaaagaacacgaccaagatgtcttggtgttggagaagatcccagcaggaaacaga
atttctaatcaaggaaattctcagccacagcacaagtatattgtgatgtcaggaacccca
gagaaaattttagagcactttctagaaactatgcgccttgaagcaactttaaatgaagca
acagattctgttttaaatgattttattatgatgcactgtgtttttatgccaaatagtcag
ctctgcccagccttgatggcacactatcatgcccagccttcccagggtacagagcaggaa
aaagtggattatgctctcaacaataaaaggcgagtcattcgactggttctgcagtgggct
gctttgtatggagatttactgcaagaagatgaagcggcaatggcctttttggaggaattt
tatgtatctgtatcagatgatactagaatgattgcagcactaaaggagcaacttccagag
ctagagaaaattgtaaagcaaatttctgaagaacctaaagcaccacaaaagaagcacaaa
gttcttctgcagctgttcaacacaagtgatgacagagcacagaaacgccagcctatcagg
ggcaatgatgaagttctgtttaaggtgtactgcatagaccaaacctacaccactatccgt
gtgccagtgtcatcttctgtgaaggaagtgatcagtgcagtagcagacaagctgggctct
ggagaaggcctcataatagtaaagatgagttcaggaggagaaaaagtcgtgctgaagcct
catgatgtttcggtgttcaccactctcagcgttaatggccggctgtttgcttgccctcgg
gatcagttcgattccttggcaccattgccagaacaagaaggaccatctgctggtacagta
ggaacatttgaattgatgagttccaaagacttagcacaccagatgacaatttatgactgg
gagctcttcaactgtgtgcatgagctggaactgatctatcacacttttggaaggcacaat
tttaaaaagaccacggcaaatctggacctgtttttaagaagattcaatgaaattcagttc
tgggtgatcaccgagatttgtctttgctctcaactcagcaagcgtgttcagctgttaaag
aaatacattaagatagcagcccactgtaaagaatacaaaaatttgaattctttcttcgct
attattatgggactgagtaatgttgctgtgagtcgtctctcattaacgtgggagaaactc
ccaagcaagttcaagaagatctatgcagagtttgaaagcttaatggatccatcaagaaac
catagggcctacagactaactgtagctaaattggaccctccaataattcctttcatgcca
ctacttataaaagacatgacgtttactcatgagggaaacaagacattcactgacaatcta
gtaaacttcgaaaaaatgcgcatgattgccaacactgtcaggacagtgaagttctgccga
agccaatctttcaatcctgatgcagccctaactaataaaaaccatcaggatgttcggagc
tacgtgcggcaattaaatgtgattgacaaccagagaactttatcacagatgtctcaccga
ctggaaccgcgccgagcataa
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