Oenanthe melanoleuca (Eastern black-eared wheatear): 130255995
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Entry
130255995 CDS
T09236
Symbol
DHX9
Name
(RefSeq) ATP-dependent RNA helicase A isoform X1
KO
K13184
ATP-dependent RNA/DNA helicase DHX9 [EC:
5.6.2.6
5.6.2.4
]
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oma03041
]
130255995 (DHX9)
03012 Translation factors [BR:
oma03012
]
130255995 (DHX9)
Enzymes [BR:
oma01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
130255995 (DHX9)
5.6.2.6 RNA 3'-5' helicase
130255995 (DHX9)
Spliceosome [BR:
oma03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
130255995 (DHX9)
Translation factors [BR:
oma03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
130255995 (DHX9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
OB_NTP_bind
Helicase_C
DEAD
HA2_N
HA2_C
AAA_19
ResIII
Dicer_dimer
HMUD2
nSTAND3
AAA_14
ATPase
Motif
Other DBs
NCBI-GeneID:
130255995
NCBI-ProteinID:
XP_056353131
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All DBs
Position
8:22408040..22434207
Genome browser
AA seq
1237 aa
AA seq
DB search
MGDVKNYLYAWCGRRRVMPAYEIRAAGGRGRQTFLCEVRVEGFNYVGVGNSTNKKDAQSN
AARDFINYLVRVNEMKKDEVPAFGPAAGDIPTGGQEAARDVSGSSSSVGGPLPPHLLIKS
EVGNGPGVAPGNCGAQWDRGANLQDYYSRKEEQEVQETTESEVDLNADLHGGWTLENAKA
RLNQFFQKERIQEEYKYIEMGPDHNRSFYAEMNIYVKQLGRRIFSREHGSNKKLAAQSCA
LSLVRQLYHLGVIEPYTGQTKKKGESLEPYEVSLASDLQNHLQKTIRELSLEIVPLPEDP
SHPVQINVGKLAHFEPSQRQSQMGVVPWSPPHSNWNPWTGCNIDEGPLANLTPEQISMDL
KSDFMYRLEQDKELQRIQEEREALPVKNFESEILDAIHHSSVVVIRGATGCGKTTQVPQY
ILDEYIRTNRAAECNIVVTQPRRISAVSVAERVSYERGEEPGQSCGYSVRFESVLPRPHA
SIMFCTVGVLLRKVETGIRGISHVIVDEIHERDINTDFLLVVLRDVIQVYPEIRVVLMSA
TIDTSMFCEYFFNCPIIEVYGRTFPVQDYFLEDCIQMTQFVPPPKEKKKKEKDEESAEDD
DANCNLICSDEYGPETKHSMAQLNERETSFELIEALLTYIRTLNVPGAVLVFLPGWNLIY
TMQKHLEMNPRFGSHQYRILPLHSQVPLEEQRRVFDPVPPGVTKVILSTSIAETSITIND
VVFVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRAGFCFRLCSRARFER
LQTHMTPEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPPLDAVIEAERTLRELDALDS
NDELTPLGRILAKLPIEPRLGKMMIMGCIFYVGDAVCTISAATCFPEPFINEGKRLGYVH
RNFAGTRYSDHVALLSAFQAWDDARMGGEEAEKRFCEHKRLSMATLRMTWEAKVQLKDIL
ISSGFPEECLMTQPFNNTGPDNNLDVVISLLAFGVYPNVCYHKEKRKILTTEGHNALIHK
SSVNCPFSSQDIKYPSPFFVFGEKIRTRAISAKTMTLVSPLQLLLFASKKVLSDGELILV
DDWIKLKMPHTAAACITALRAAMEALVVEVTKDPGVVRQLEPAHERMLTVIRQLSRPAAA
GMALTAASTRFGDGPRPPKMARYANGGGLRGRGGYGHGPGRSGRGYGGYSGWHSAGRGFP
GNPGGGYAAGAACRGGGYRGAGRGYRGACWDAGRGGW
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atgggggacgtgaagaactacctgtacgcctggtgcggcaggaggagggtgatgccggcc
tacgagatccgcgccgccggcggccgcggccgacagaccttcctctgcgaggtccgagtg
gaaggcttcaattatgttggtgtgggcaactctaccaacaagaaggatgctcagagcaat
gctgcccgagacttcatcaactacttagtgcgggtcaatgaaatgaagaaggatgaggtt
cctgcttttggaccagcagcaggtgatatccccactggaggacaggaagcagctagagat
gtgtctggttccagttcatctgtggggggacctcttcctccacatttgcttataaaaagt
gaagtaggcaacggaccaggtgtagcacctggaaactgtggagctcaatgggatcggggt
gcaaacttgcaagattattattccaggaaagaggagcaagaagtgcaggagaccacagag
tcagaagtggacttaaatgcagatcttcatgggggttggaccttagaaaatgccaaggca
cgtctgaaccagtttttccaaaaggagaggatccaggaagaatataaatacattgaaatg
gggcctgatcacaacaggagcttttacgcagaaatgaacatttatgtgaagcagctgggc
agaaggattttcagtcgcgagcacggatcaaacaaaaagctggcagcacagtcctgtgct
ctttccctggtcagacagctctaccaccttggtgtcattgagccttacactgggcagacg
aagaagaaaggagaatcgttggagccctatgaggtgtcactggcttctgacttacaaaat
catctgcaaaagacgatacgggagctgtccctggagattgtgcctttgcctgaagatccc
agtcatccagttcagatcaacgttggaaagttggcccatttcgaaccatcacagagacaa
agtcaaatgggagttgttccgtggtcaccacctcattccaactggaacccttggactggc
tgcaatattgatgagggtccactggcaaatctcactccggagcaaataagcatggatctg
aaaagtgatttcatgtaccggctggagcaggataaggaattgcagaggatccaagaagag
agagaggccttacctgtgaagaattttgaaagtgaaattctggatgcaatccatcacagt
tctgttgttgtcatccgtggtgccactggctgtggcaaaaccactcaagtgccccagtat
atcctggatgaatacatcagaaccaaccgagctgctgagtgtaacatagtggtgacacag
ccccggaggatcagcgcggtttctgtagcggagcgtgtgtcctacgagaggggggaagag
cccgggcagagctgtgggtacagcgtgcgcttcgagtctgtgctccctcggccacacgcc
agcatcatgttctgcactgtaggtgttcttctgaggaaagtggagactgggatccgcggc
attagtcatgttattgttgatgagatccatgagagagacatcaatactgacttccttttg
gtggtgctgagggatgtcattcaggtgtatcctgaaatcagggttgtccttatgtctgcc
accatcgataccagtatgttttgtgaatacttcttcaactgtcccatcatagaggtctat
gggagaacctttcctgtccaagattattttctggaagattgtattcaaatgactcagttt
gtccctccgccaaaggaaaagaagaaaaaagagaaggatgaagaaagtgctgaagatgac
gatgccaactgcaaccttatttgcagcgatgaatatggcccagaaacaaagcactccatg
gctcagctgaatgagagggaaacctcttttgaactcattgaggctctgctgacttatatc
aggactctgaatgtcccaggagctgtccttgttttcttgcctggctggaacttaatctat
acaatgcagaagcatctagaaatgaacccacgctttggaagccaccagtacaggatttta
cctctgcattcccaggttcctctggaggagcagcgtcgagtgtttgatcctgtgcctcct
ggggtgaccaaggtcattttatctaccagtattgccgagaccagcattaccatcaatgac
gtggtctttgttatcgactcttgcaagcaaaaagtgaagctgttcactgctcacaacaac
atgacaaactatgccacggtctgggcatcaaaaaccaatttggagcagcggaaaggcaga
gctgggcgcgtgcgagccgggttctgtttccgtttgtgcagcagagctcgctttgagaga
cttcagacgcacatgacgcctgaaatgtttcgaacgccacttcacgaaattgctttgagc
atcaagctgctgcggctgggagggatcgggcagttcctggccaaagccatcgagccgccg
cccctggacgcggtgattgaagcagagcgcacgctgagagagcttgatgccctggattcc
aatgatgagttgacacctcttggaagaatcctggccaaacttcccattgagcctcgtctg
ggcaagatgatgatcatgggctgtattttttatgtgggagatgctgtttgtaccatctct
gcagctacctgtttccctgaacctttcatcaatgaaggcaaacgcctgggatacgtccat
aggaattttgctgggaccaggtattcagatcatgtagctttgctctctgccttccaagcc
tgggatgatgcaagaatgggtggtgaagaagcagagaaaagattttgtgaacacaaaaga
ctcagcatggccactcttagaatgacttgggaagcaaaagtccagctaaaagacatactt
attagttctggctttcctgaagaatgtttgatgactcaaccgtttaacaacactggccct
gataacaacctggatgttgtcatctccctgctggcttttggggtctaccccaatgtctgc
taccacaaggaaaagaggaagattcttaccactgaggggcacaatgctctcattcacaaa
tcgtctgtcaactgcccattcagcagccaggacatcaagtatccatcacccttctttgtt
tttggagagaagattcgaacacgagctatctctgccaaaaccatgaccttggtgagcccg
ctgcagctgctcctctttgcttccaagaaagtcctgtcagatggggagctcattctggtg
gatgactggatcaagctgaagatgccgcacacagcagctgcctgcatcaccgccctgcgc
gctgccatggaggcgctggtggtggaggtgaccaaggaccctggcgtcgtccggcagctg
gagccggcgcacgagcgcatgctgaccgtgatccggcagctgtcccggccggcggcggcg
gggatggcactcacggctgccagcaccaggttcggggacggcccccgcccgcccaagatg
gctcgctacgccaacgggggcggccttcggggccggggaggctacgggcacggccccggc
cgcagcggcagaggctacggcggatactccggctggcactcggcgggaagaggattccct
ggtaatcctgggggaggctacgcagctggggctgcctgccgaggaggagggtaccgagga
gcaggcaggggctaccgaggcgcctgctgggatgcgggcagaggtggctggtag
DBGET
integrated database retrieval system
