Oenanthe melanoleuca (Eastern black-eared wheatear): 130260219
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Entry
130260219 CDS
T09236
Symbol
TRAF2
Name
(RefSeq) TNF receptor-associated factor 2 isoform X1
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Pathway
oma04010
MAPK signaling pathway
oma04137
Mitophagy - animal
oma04141
Protein processing in endoplasmic reticulum
oma04210
Apoptosis
oma04217
Necroptosis
oma04621
NOD-like receptor signaling pathway
oma04622
RIG-I-like receptor signaling pathway
oma04920
Adipocytokine signaling pathway
oma05132
Salmonella infection
oma05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
130260219 (TRAF2)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
130260219 (TRAF2)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
130260219 (TRAF2)
09143 Cell growth and death
04210 Apoptosis
130260219 (TRAF2)
04217 Necroptosis
130260219 (TRAF2)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
130260219 (TRAF2)
04622 RIG-I-like receptor signaling pathway
130260219 (TRAF2)
09152 Endocrine system
04920 Adipocytokine signaling pathway
130260219 (TRAF2)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
130260219 (TRAF2)
09171 Infectious disease: bacterial
05132 Salmonella infection
130260219 (TRAF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oma03019
]
130260219 (TRAF2)
04121 Ubiquitin system [BR:
oma04121
]
130260219 (TRAF2)
Enzymes [BR:
oma01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130260219 (TRAF2)
Messenger RNA biogenesis [BR:
oma03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
130260219 (TRAF2)
Ubiquitin system [BR:
oma04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
130260219 (TRAF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF_BIRC3_bd
zf-TRAF
TRAF2_zf
zf-C3HC4
TRAF3_RING
Sina_ZnF
zf-C3HC4_2
zf-C3HC4_4
zf-RING_6
zf_C2HC_14
zf-C3HC4_5
zf-TRAF_2
zf-RING_10
zf-C3HC4_3
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
130260219
NCBI-ProteinID:
XP_056361393
LinkDB
All DBs
Position
17:10807906..10830787
Genome browser
AA seq
533 aa
AA seq
DB search
MRAASRASPTQHFPAIAVLSAPSCRRPSFPTAVPRAGATGHEAAMALCAQSLEIQPELFV
HMAAANSSPPGSLDLNQPGFAKEILGTKLEVKYLCSDCKNILRRPFQAQCGHRYCSYCLK
KIISAGPQKCASCIQEGIYEEGISILETSSAFPDNAARREVESLPAVCINSGCTWKGTIK
EYEAHDEVCPEFPLTCEGCGKKIPREKFRDHVKTCGRSKVPCRFEAVGCAELVENEKLLE
HERKCLAEHLYMLLSSVLSLKTGAGDPKPLPVLSSSQNSSPVLAANSLCSESELSRSLEL
LGRCEALERKTVTFENIVCVLNREVERVSLTAEAYSRQHQLDQEKIETLSNKVRQLERSI
GLKDLAMAEMEEKIRSMEASTYDGVFIWKITEFARKRQEAITGRSPAIFSPAFYTSKYGY
KMCLRVYLNGDGTGRGTHLSLFFVVMKGPNDALLRWPFNQKVTLMLLDQNNREHIIDAFR
PDVTSSSFQRPVTEMNIASGCPLFCPVSVMEAKNSYVRDDAIFIKAIVDLTGL
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgcgggctgcatcgcgcgcttcccctacacagcattttcctgccatcgccgtcctgtcg
gctccgtcctgccgccgcccatccttcccgaccgctgtgccccgagccggcgccacggga
cacgaggcggccatggcactctgtgcgcagtctctggagatacagccagaacttttcgtt
cacatggcagcagcaaactcttctccacctggttctttggatctaaaccagcctggattt
gcaaaggagatcctgggaactaaactggaggtgaaatacctgtgctctgattgcaagaac
attctgaggcggccgttccaggcacagtgtggccaccgctactgctcctactgcctgaag
aaaatcatcagtgctggacctcaaaagtgtgccagctgtatccaggaaggaatatatgaa
gaaggaatttctattttggaaacaagctcggctttcccggacaacgcggcgcggcgggag
gtggagagcctgcctgctgtctgcatcaacagtggctgcacctggaagggaactatcaaa
gagtacgaggctcatgatgaagtttgccctgaattcccgctgacttgtgaaggctgtggg
aagaagattcccagggagaagtttcgggaccacgtgaagacgtgtggcagatccaaagtg
ccctgccggttcgaggctgtgggctgtgctgagctggtggaaaatgaaaagctcctggaa
catgaaaggaagtgtttggcagagcatctctatatgctgctgagctctgtgctcagcctc
aagactggtgctggggacccgaaaccccttcctgtcctttcctcgtcacaaaacagctcc
ccagtgctggcagcaaactccctgtgctcggagtcagagctctctcgctccctggagctc
ttgggaagatgtgaggcccttgagaggaaaacagtgacctttgagaacattgtctgtgtg
ctcaaccgggaggtggagagagtttccctgacagctgaagcctacagccgccagcaccag
ctggaccaggagaaaattgaaacgctgagcaacaaggtgcggcagctggagaggagcatt
gggctcaaagacctggccatggctgagatggaggagaagatccgcagcatggaggcttcc
acctatgatggagtgttcatctggaagataacagagtttgcccggaagcgtcaggaggcg
ataacaggccgctctcctgccatcttttctccagctttctacaccagcaagtacggctac
aagatgtgtctgcgcgtgtacctgaacggggacggcaccggccgcgggacccacctgtcc
ttgttcttcgtggtgatgaagggacccaacgacgcgctgctgcggtggcccttcaaccag
aaggtgaccctgatgctcctggaccagaataaccgggagcacatcatcgatgccttccgc
cccgacgtgacgtcctcgtccttccagcgccctgtcacggagatgaacattgccagtggc
tgccccctcttctgccccgtgtccgtcatggaagccaagaactcctacgtgcgggatgat
gccatctttattaaagccatcgttgatctcacgggcctctaa
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