Oenanthe melanoleuca (Eastern black-eared wheatear): 130263783
Help
Entry
130263783 CDS
T09236
Symbol
PKP1
Name
(RefSeq) plakophilin-1
KO
K10387
plakophilin 1
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Pathway
oma04382
Cornified envelope formation
oma04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
130263783 (PKP1)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
130263783 (PKP1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oma04812
]
130263783 (PKP1)
Cytoskeleton proteins [BR:
oma04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
130263783 (PKP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
ZER1-like_2nd
HEAT_GCN1
HEAT
ARM_PUB
HEAT_2
SYS1_M
V-ATPase_H_C
ARM_LRRK2
WRM1_C
ARMC9_ARM
LTN1_E3_ligase_6th
Mo25
Atx10homo_assoc
ARMC6
TOR1L1_N
Motif
Other DBs
NCBI-GeneID:
130263783
NCBI-ProteinID:
XP_056367538
LinkDB
All DBs
Position
26:complement(5482106..5527273)
Genome browser
AA seq
732 aa
AA seq
DB search
MLHSPLKTALAYECFQDQASSTLALPSDHKLKTKGTGKQRVQEQVMMTVKRQKQKSSVSS
SVGHSNRGSMYDGLADGYGYGTSRGSYYTKAQAGNSSWGYPLYNGTLKRDAENRRYSSYS
QMEGWASRAHGKAVCSPRAGSDYCFVHNIKSSRSEPDLYCEPPRGTLRRAQGGRAEHKAT
LHRQSIYSSCSTQQGAGRPCKKGPARALSCPSSNKPDVVYAQPVTSCKQDGLYGQPQPGS
KICGDEIDAGTMTIQKAIQLLCSSDDKYQAMGAYYLQHTCFQDESAKQEVYRLGGIAKLV
ELLRSQNQNVQRAAAGALRNLVFKNPTNKMETRRQNGVRECVSLLRRTGNTEIQKQLTGL
LWNLSSTDELKEELIQEALPVLTDCVIIPFSGWSDSSCNRTREIIDPEVFFNATGCLRNL
SSADMGRQTMRNYPGLIDSVMTYAQNCVASSRPDDKSVENCICILHNLSYRLDAEVPNKY
TQLNHMARSVYMDKTLTGCFNSRSGKMENDEYGVPLPEEDFKPKGPSWLYHSDAIRTYLS
LMDQSKKDATLEACAGALQNLTASRGLMSSAMSQLIGLKEKGLPRVARLLQSSSSDVVRS
GASLLSNMSRHPALHKTMAHQVLPDVSRLLSFQSGNTSSYGEIMTSACYTLRNLIMSNPH
LGKSYLSSNLLNNVVSLCRNGSCPKAAEAARLLLTDLWSNRELQSVLKQQGFDKNMMGSL
AGTTFRTLSSRF
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgctgcactcccctctgaaaacagcgctggcctacgagtgcttccaggaccaggccagc
tccacgctggccctgccctccgaccacaagctgaaaaccaagggcacgggcaagcagcgc
gtccaggagcaggtgatgatgacggtcaagaggcagaagcaaaagtcatcagtgtcgtca
agcgtgggccactccaaccgaggttccatgtacgatggtttggctgatggttatggctac
gggacatcccggggcagctactacaccaaggcccaggcagggaacagcagctggggatac
ccgctctacaacgggacgctgaagcgggacgcggagaatcggcgctacagctcctacagc
cagatggagggctgggccagccgcgcccacggcaaggccgtgtgcagcccccgcgccggc
agcgactactgcttcgtgcacaacatcaagagcagccgcagcgagcccgacctgtactgc
gagccgccccgcgggaccctgcgcagggcccagggcggccgcgccgagcacaaggccacg
ctgcaccgccagagcatctacagctcctgcagcacccagcagggagccggccggccctgc
aagaaggggccggcgcgggccctgtcctgcccctccagcaacaagcccgacgtggtctat
gcccagcccgtgacgagctgcaagcaggacgggctctatggccagccccagcccggctcc
aagatctgtggtgatgagattgatgctggcaccatgaccatccagaaggccatccagctc
ctctgctcctctgatgacaagtaccaggccatgggggcttactacctgcagcacacctgc
ttccaggatgagtctgccaagcaggaggtctatcggctggggggcattgccaagctggtg
gagctgctgcgcagccagaaccagaacgtgcagcgggcggcagcgggggccctgcggaac
ctggtgttcaagaaccccaccaacaagatggagacgcggcggcagaacggggtgcgggag
tgcgtgagcctcctgcgcaggacagggaacacggaaatccagaaacagctcacaggactg
ctctggaacctctcctccactgatgaactaaaagaagaattgatacaggaggctctgccc
gtgctgacagactgtgttatcatccctttctcgggctggtctgatagcagctgcaacagg
acacgagaaattattgacccagaggtgttcttcaatgccacagggtgtttgaggaacctg
agctctgcagacatggggcgccagaccatgaggaactaccccggcctgatcgactctgtc
atgacctatgcccagaactgcgtggcctccagccgccccgacgacaagtctgtggagaac
tgcatctgcatcctgcacaatctctcctaccgcctggatgctgaagttcccaacaaatac
acccagctcaaccacatggcccggagtgtttacatggacaaaactctcacaggctgcttc
aacagcaggagtgggaaaatggagaatgatgagtatggggtcccccttcctgaggaggat
ttcaagcccaaaggccccagctggctgtaccactcggatgccatccgcacctacctgtcc
ctgatggatcagagcaagaaggatgccaccctggaagcttgtgctggagctctgcagaac
ctcactgccagcagagggctgatgtccagtgccatgagccagctgatcgggctgaaggag
aaggggctgccccgcgtggcgcggctgctgcagtccagcagctccgacgtcgtccgctcc
ggggcctctctgctcagcaacatgtccaggcaccctgcactccacaaaaccatggctcac
caggtgctcccagatgtgtcccgtctcctgtcgttccagtctggaaacaccagcagctat
ggggagatcatgacatcagcttgttacactctgaggaacctcatcatgtccaacccccac
ctgggaaagtcttacttgtccagcaacttgttaaataatgtagtgagcctgtgccggaac
ggctcctgcccaaaagcagctgaagctgctcgacttctcctgacagacctttggtccaac
agggagctccagagtgtgctcaagcagcaagggtttgataagaacatgatgggatcttta
gctggaacgaccttcaggaccctctcctccagattttag
DBGET
integrated database retrieval system
