Oenanthe melanoleuca (Eastern black-eared wheatear): 130264096
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Entry
130264096 CDS
T09236
Symbol
SCN4A
Name
(RefSeq) sodium channel protein type 4 subunit alpha
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oma04040
]
130264096 (SCN4A)
Ion channels [BR:
oma04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
130264096 (SCN4A)
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Ortholog
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GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
IQ
GPHH
Motif
Other DBs
NCBI-GeneID:
130264096
NCBI-ProteinID:
XP_056368073
LinkDB
All DBs
Position
27:complement(972830..1019587)
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AA seq
1867 aa
AA seq
DB search
MSSRAMRRRLAPFPFAAGRARGARKQNARMAGLPHIPGPENLRPFTPASLAAIEQRRAQA
EALRLKRQHVEMPEEEELKPSSDLEAGKNLPLIYGDPPPELIGTPLEDLDPFYNDKKTFI
VLNKGKSIFRFSATPALYMLGPFHPIRRGAIKVLIHSLFSMFIMITILTNCVFMTMSNPP
AWSKNVEYAFTGIYTFESLIKILSRGFCIDDFTFLRDPWNWLDFMVISMAYITEFVDLGN
ISALRTFRVLRALKTITVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMG
NLRQKCVRWPPPNSTFLDNDTLVNSTSYGFTDDFTGNFTGNFTGNFTGNSTFDFEAYISD
EANYYFLEGALDALLCGNSSDAGKCPEGYQCMKAGRNPNYGYTSYDTFSWAFLALFRLMT
QDFWENLFQLTLRAAGKTYMIFFVVVIFLGSFYLINLILAVVAMAYAEQNDATMLEEQQK
EEEFQQLMEQLKKQQEEQERLLQERGSSSESLPSSVAGKGHDSDINSDQDKAKDCNGQVV
PKITLQRSDTVIDFNPTYEPEKPDLNHLTVGNQDGPGLEKRVGSAISVISNAVEELEEAH
QKCPPWWYKFAHTFLVWNCCRPWVMLKEFVKLVVMDPFVDLGITICIVLNTLFMAMEHYP
MTEEFENVLSVGNLVFTGIFTAEMVLKLIALDPYEYFQQGWNIFDSFIVTLSLVELGLAN
VQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQL
FGKSYMECVCKISVDCTLPRWHMHDFFHSFLIVFRILCGEWIETMWDCMEVAGQTMCLIV
FMMVMVIGNLVVLNLFLALLLSSFSADSLAASDDDGEMNNLQIAIGRISRGIALARAALL
ALLRRLCKGKKVAPEEEQDPGKRDSSVLNHMDAALEPKAGYLDGVTGKEHIFMDELDHMN
FINNPNLTVQVPIASEESDLYEETSTQSDTEDTTKNPVCSDNASSVCSTVDYKPPAPEEE
QVAEVAEESNEPEECFTEGCVKRFPCLYVDINSEKGKTWWNLRKTCFRIVEHDWFETFIV
FMILLSSGALAFEDIYIEQRKVIRTILEYADKVFSYIFVIEMLLKWVAYGFKVYFTNAWC
WLDFLIVDVSLVSLTANWLGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIP
SIMNVLLVCLIFWLIFSIMGVNLFAGKYYRCVNTTTGELFDISSVNNKSDCMALLYSNEV
RWVNVKVNFDNVGLGYLSLLQVATFKGWMDIMYAAVDSREIEEQPQYEINLYMYIYFVIF
IIFGAFFTLNLFIGVIIDNFNQQKKKFGGKDIFMTEEQKKYYNAMKKLGSKKPQKPIPRP
ANKIQGKVFDFVTKQVFDITIMILICLNMVTMMVETDDQSELKTSVLYKINLVFIVIFTG
ECVLKMFALRHYFFTVGWNIFDFVVVILSILGIVLSDIIEKYFVSPTLFRVIRLARIGRV
LRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSNFAYVKKEAGIDDIFN
FETFGNSIICLFQITTSAGWDGLLSPILNSGPPDCDPELENPGSSVKGDCGNPAIGIFFF
CSYIIISFLIVVNMYIAIILENFSVATEESSEPLCEDDFEMFYETWEKFDPDATQFIAYS
TLSDFVDTLQEPLRVPKPNKIKLITMDLPMVAGDKIHCLDILFALTKEVLGDSGEMDALK
ATMEEKFMAANPSKVSYEPITTTLKRKHEEVCATKIQRAFRRYLLRRSVKQASYMYRHSQ
DALGEDAPEKEGLIATKMQEIYGNTGTDVETAPALGLEPIPSSETPQDAPEEAQAWGKER
VVKESLV
NT seq
5604 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcagagccatgaggagacgccttgcaccgtttccatttgcagcaggcagggcg
cggggggcccgcaagcagaatgcgaggatggccggcctgccgcacatcccgggccccgag
aacctgcgccccttcacgccggcctcgctggccgccatcgagcagcgcagggcccaggcc
gaggcgctccgcctgaagcgccagcacgtcgagatgcccgaggaggaggagctcaagccc
agcagtgacctggaagccggcaagaacctgcccctcatctatggtgacccacccccggag
ctcatcgggacccccctggaggacctggaccctttctacaacgacaagaagaccttcata
gtcctcaacaagggcaagtccatcttccgcttctcggccacccctgccctctacatgctg
gggcccttccaccccatccgcagaggagccatcaaagtcctcatccattcattattcagc
atgttcatcatgatcaccattttaaccaactgcgtgtttatgacaatgagcaaccccccg
gcgtggtccaagaacgtggaatatgccttcactggcatctacaccttcgagtccctcatc
aagatcctgtcaagaggtttctgcatcgacgacttcacattcctgcgggacccctggaac
tggctggacttcatggtcatctccatggcctacatcaccgagttcgtggacctggggaac
atctcggctctcaggaccttccgtgtcctccgtgccttgaaaaccatcacggtgatacca
gggctgaagacgatcgtgggggctctgatccagtcggtgaagaagctctcggacgtgatg
atcctcacggttttctgcctgagcgtcttcgccctcatcggcctccagctcttcatgggc
aacctgcggcagaagtgtgtgcgctggcctccccccaacagcaccttcctggacaacgac
accttggtcaactcaacctcctatggcttcacggatgacttcaccgggaacttcaccggg
aacttcaccgggaacttcaccgggaacagcacctttgacttcgaggcctacatcagcgat
gaagccaattactacttcctggagggagccctggacgccctgctctgtgggaacagcagt
gatgctgggaagtgccccgagggctaccagtgcatgaaggccggcaggaaccccaactat
ggctacaccagctacgacaccttcagctgggccttcctggccctcttccgcctcatgacc
caggacttctgggagaacctcttccagctgacactgcgggcagcagggaaaacctacatg
atcttcttcgtggtggtgatcttcctgggctccttctacctcatcaacctcatcctggcc
gtggtggccatggcttatgctgagcagaacgatgccaccatgctggaggagcagcagaag
gaggaggaattccagcagctcatggagcagctgaagaagcagcaagaggagcaggaaagg
ctgttgcaggagcgcggatccagcagcgagtccctgcccagcagcgtggccgggaaggga
cacgactcggacatcaacagtgaccaggacaaggccaaggactgcaacgggcaggtggtg
cccaagatcaccctgcagagatctgacactgtcattgatttcaatcccacctatgagcca
gagaagccagacctcaaccacctcactgtgggcaaccaggacgggccagggctggagaag
agggtgggaagtgccatcagtgtcatctccaacgctgtggaagagctggaagaagctcac
cagaaatgcccaccctggtggtacaaatttgcccacacattcctggtctggaattgctgc
cgtccatgggtgatgctgaaggagtttgtcaagctggtggtgatggaccccttcgtggac
ctgggcatcaccatctgcatcgtgctcaacactctcttcatggccatggagcactacccc
atgacggaggagttcgagaacgtgctgagcgtggggaacctggtcttcacagggatcttc
acggcagagatggtcctgaagctcattgctctggatccctacgagtatttccagcagggc
tggaacatcttcgacagcttcatcgtcaccctgagcctggtggagctgggcttggccaac
gtgcaggggctctccgtgctccgctccttccgcctgctgagggttttcaagctggccaag
tcctggcccaccctcaacatgctcatcaagatcatcggcaactccgtgggcgccctgggc
aacctcacgctggttctggccatcatcgtcttcatcttcgccgtggtggggatgcagctg
ttcggcaagagctacatggagtgcgtgtgcaagatctctgtggactgcaccctgccccgc
tggcacatgcacgacttcttccactccttcctcatcgtcttccgcatcctgtgcggggag
tggatcgagaccatgtgggactgcatggaggtggccggccagaccatgtgcctcatcgtc
ttcatgatggtcatggtcatcgggaacctggtggtgctaaacctgttcctggctctgctg
ctgagctccttcagcgccgacagcctggcggcgtcggacgacgacggggagatgaacaac
ctgcagatcgccatcggccgcatcagccgcggcatcgccctggccagggccgcgctgctg
gcgctgctgcgccgcctctgcaagggcaagaaggtggcgcccgaggaggagcaggacccc
ggcaaaagggacagctccgtgctcaaccacatggacgcggccctggagcccaaggcaggg
tacctggatggcgtcacaggcaaggagcacattttcatggatgagctggaccacatgaat
ttcatcaacaaccccaacctgacggtgcaggtccccatcgcctccgaggagtccgacctc
tacgaggagaccagcacccagtcggacaccgaggacaccaccaagaaccccgtgtgcagt
gacaacgcctcgtccgtgtgcagcacagtggattacaaaccgcccgcgcccgaggaggag
caggtggcagaggtggctgaggagagcaacgagcccgaggagtgtttcactgaaggctgt
gtgaagaggttcccctgcctctatgtggacatcaacagtgagaaggggaagacttggtgg
aacctcaggaaaacctgcttccgcatcgtggagcacgactggttcgagactttcatcgtc
ttcatgatcctcctcagcagcggggcactggctttcgaggacatctacattgagcagcgc
aaggtgatccgcaccatcctggaatacgcagacaaggtcttctcctacatctttgtcatc
gagatgctgctcaagtgggtggcctatggcttcaaggtgtacttcaccaatgcctggtgc
tggctggatttcctcatcgtggatgtgtccctggtcagcctgacagcaaactggctggga
tactctgagctgggagccatcaaatccctgcggacgctgagggctctgcgacctctgcgt
gctctgtcccggtttgagggcatgagggtggtggtgaatgccctggtgggcgccatcccc
tccatcatgaacgtcctgctggtctgcctcatcttctggctgatcttcagcatcatgggg
gtgaacctgtttgcagggaagtactacaggtgtgtcaacaccaccacgggcgagctcttc
gacatcagctcggtcaacaacaagagcgactgcatggccctgctctactccaatgaggtc
agatgggtcaacgtcaaggtcaacttcgacaacgtgggcttgggatacctgtccctgctg
caggtggcaaccttcaaaggctggatggacatcatgtacgcagccgtggactcacgcgag
attgaagagcagccacagtacgagatcaacctctacatgtacatctactttgtcatcttc
atcatcttcggtgccttcttcaccctgaacctcttcatcggcgtcatcattgacaacttc
aaccagcagaagaaaaagtttggaggcaaagatatcttcatgacagaagagcagaagaaa
tactacaatgccatgaagaagctgggctccaagaaaccccagaagcccatccccaggcca
gcgaacaaaatccaagggaaggtgtttgactttgttaccaagcaagtgtttgacatcacc
atcatgatcctgatttgcctgaacatggtgaccatgatggtggaaacagatgaccagagc
gagctcaagacctctgtgctctacaagataaacctggtcttcatcgtcatcttcaccggg
gagtgcgtgctcaagatgttcgccctgcgtcactacttcttcactgtgggctggaacatc
ttcgactttgtggtggtcatcctctccatcctaggtatcgtcctctcagacatcatcgag
aagtactttgtgtcccccaccctcttcagggtgatccggctggcgaggatcggccgcgtg
ctccggctgatccgaggagccaaaggcatccgcacgctcctctttgccctgatgatgtcc
ctgcctgccctgttcaacatcggcctcctgctcttcctcgtcatgttcatctactccatc
tttgggatgtccaattttgcctacgtcaagaaggaggcagggatcgatgacatcttcaac
tttgaaacctttgggaacagcatcatctgcctcttccagatcaccacatcagcgggctgg
gatgggctcctcagccccatcctcaacagcggccccccagactgcgaccccgagctggag
aaccccgggagttcggtgaaaggagactgtgggaaccccgccatcggcatcttcttcttc
tgcagctacatcatcatctccttcctcatcgtggtgaacatgtacatcgccatcatcctg
gagaacttcagcgtggccacagaggagagcagcgagcccctctgcgaagacgattttgaa
atgttttatgaaacctgggagaagtttgacccagatgccacccagttcattgcctacagc
accttgtctgactttgtggacaccttgcaggagccactcagagttcccaagcccaacaag
atcaaactcatcaccatggatctaccaatggttgctggggacaaaatccactgcctagac
attctctttgccctgactaaagaagtgctgggagactcgggagagatggatgccctgaag
gccaccatggaggagaagttcatggctgccaacccctccaaagtttcctacgaacccatc
accaccaccctgaagaggaaacacgaggaggtttgtgccaccaagatccagagggcgttc
cggaggtacctgctgcggcgctcggtgaagcaggcgtcctacatgtacaggcacagccag
gacgccctgggcgaggacgcgcccgagaaggaagggctgatcgccaccaaaatgcaggag
atctatgggaacactgggacagatgtggagacagcccctgccttgggcctcgagcccatt
cccagctctgagacgccccaggacgctcctgaggaagcacaggcttggggtaaggaacgc
gtggtcaaagagtcgctggtgtaa
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