Oenanthe melanoleuca (Eastern black-eared wheatear): 130264186
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Entry
130264186 CDS
T09236
Symbol
BRCA1
Name
(RefSeq) LOW QUALITY PROTEIN: breast cancer type 1 susceptibility protein
KO
K10605
breast cancer type 1 susceptibility protein [EC:
2.3.2.27
]
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Pathway
oma03440
Homologous recombination
oma03460
Fanconi anemia pathway
oma04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
130264186 (BRCA1)
09124 Replication and repair
03440 Homologous recombination
130264186 (BRCA1)
03460 Fanconi anemia pathway
130264186 (BRCA1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oma01009
]
130264186 (BRCA1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oma04121
]
130264186 (BRCA1)
03036 Chromosome and associated proteins [BR:
oma03036
]
130264186 (BRCA1)
03400 DNA repair and recombination proteins [BR:
oma03400
]
130264186 (BRCA1)
Enzymes [BR:
oma01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130264186 (BRCA1)
Protein phosphatases and associated proteins [BR:
oma01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
130264186 (BRCA1)
Ubiquitin system [BR:
oma04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130264186 (BRCA1)
Multi subunit type E3
BRCC complex
130264186 (BRCA1)
Chromosome and associated proteins [BR:
oma03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
130264186 (BRCA1)
DNA repair and recombination proteins [BR:
oma03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
130264186 (BRCA1)
BRCA1-A complex
130264186 (BRCA1)
BRCA1-B complex
130264186 (BRCA1)
BRCA1-C complex
130264186 (BRCA1)
BRCA complex
130264186 (BRCA1)
FA (Fanconi anemia) pathway
Downstream FA components
130264186 (BRCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT_assoc
BRCT
zf-C3HC4
BRCT_2
zf-C3HC4_4
zf-C3HC4_2
zf-RING_2
zf-RING_UBOX
zf-C3HC4_3
zf-Nse
BRCT_3
zf-RING_6
zf-RING_5
RING_XB3-XBAT31
zf-RING_10
zf-MIZ
RTT107_BRCT_5
Zf_2nd_IFT121
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
130264186
NCBI-ProteinID:
XP_056368188
LinkDB
All DBs
Position
27:2882675..2903179
Genome browser
AA seq
1804 aa
AA seq
DB search
MDFSVITIGQVQNVLSAMQKNLECPICLDVIQEPVSTKCDHIFCRFCMFKLISKKKKGVV
ECPLCKTEVTKRSLKENSKFKQLIEGLLETIHAFELDTGVKFLKSHHFPQTSKEATAAES
LCKESSVIQSKGFRNRRKSAKGNEQENITLQEASVNIQLTDAKMCHPRNKPQKSDSQKGT
YIEFGSESSEEFFKQATKTGFEDKGAVQVSPQVSLEEFESAEKGNENSCNAQPDKLCAKE
IALPNVTGESDFSKECLSKKSTQSITECAKPDQVNVTECQSSPLNLLAVDLLPEQCDRIG
DASPTLDGDTSFFKNTEEMDEQQTQYHSENRGFDLEGISEGKLDKSKGIDTDVQNVEAVE
ACEPENDSFHDQELPLEQIPQPETLHSATPNKVSKKRLKQSIQKVNEWFSKSNEILSSSS
SLDESAASADVSDEGDLCLSDKESCISEKTDPMADSMEIAAVEGKKRQSKQTAESIKDKI
FGRTYKRGRKSNPPSTLRAILPTRRKEDVAAGKCLKNFSKDRLKQKRKSACVLQPEDFIK
KKDTEVADGGPQSDDRGLGDAGKKRCDGSVAVNESHLSQDRANNTLTELGKGGESTLKKA
TEKVPAKSCDEDPKMHNCDQKNTKKRGSAAKRCRHSSRTMCSLQLVVDRDSVFPDAAEPQ
IDSYPSSGEPRKADSEQNPVRRSRRLQLLSAEMKKETKKEVEGARENNSEHGRSVSGDQR
SGAAHSAKCKDLHEPQDESSYRPVTNLEGGDLEANEMQVGLKNLPGTAETGRSLFSPSHL
PSNCGSTVPDTSSQGSEILGSPLLLPLPSVSAGHTASQKTEEVSESPAACPQECGHDPQS
VPGDFKSEKLPMAKNVLELTKEAEDGDLDTQYLRNIFRHSKRSSFSLFQTPRQAHAVKNP
PSDTLTLSCAAQVENKATKQLQPESLQEEKTAAQNLSRVSEKEKLKASESALVDPVPCSA
VSTGEHRDDISQAAEEGTLTPARTGTAQTEHKNGLLQEEQDNEKPEIGIESELRQNPIKS
GGSQSDQSNTEHDDSRQNDLNSGQEISFSSESNQAGKTELVDCKGPILHFQSTSMICPAT
CEQNPAEFSCEVTGTKNSKRERIPIKGNEEQAAQTVSTAVPKSSAAEALEEPLRENHDLR
GLSETPDGLLCSDTDIEDTSLCETDRKEQSAVFVKSDSALGKELHNRNGSSEPRSQDIQK
SRRRVQKLPSSDEGSCEDEDLPCFQALIFSKSVSTPLQTDKQMASLVECAVSPSMSPHSV
SNDDNIVQKVPEAALSNVCVSPSQGSECSVNLFSSQSNMSEESPDGAQELKKDLPEAHES
KNMNSVNDSKETQNCNEGLKTSKDECQEDPDMGANLGEAESGSDSEISIVEDSCGPFSQG
EILTTQQKNAMQNSLKKLQQEMAALEAVLKQNGSQNCEVLPVHRELPPSSTKGAFEKEQT
RKEKNRSPELLLPSSKLSLTKRLDVGRGPECDSVLKNKTPSEKTKPVQEAVQEHRQCQLG
AEDAEEQKSGTMQNTASVSSDLFXNVTQSTDNSSSSLGLFIPQTAEATGGPVVAQNTDQS
CGPGHKLKRSACFPVPVLHNAAGKENAASPVVSKRKEMSIVASGLNHSEHLVVQKFVKKT
QSTLSNHITEGTTHVIMKTDKEMVCERTLKYFLGIAGGKWVLSYQWIIQSFKEGRILDEE
PFEVRGDVVNGRNHQGPKRARQALTEKIFKDFEICCCGPFTDMTTEHLEWMVELCGASVV
KQPDLFSHTANSTAVVVVQPDAWKENLDYRAIPQQSNVAVVTREWVLDSVACYKCQEISA
YLLS
NT seq
5415 nt
NT seq
+upstream
nt +downstream
nt
atggacttctcagtgattactattggacaagtacaaaatgtgctttcagctatgcagaag
aacttggagtgccctatatgcttggatgtgatacaagagcctgtttcaacaaaatgtgat
cacatattctgcaggttctgcatgttcaaacttatcagcaaaaagaaaaaaggtgtggtg
gagtgtcctctgtgtaagactgaagttaccaagagaagtctgaaagaaaattccaaattt
aagcaactaattgaaggactgttggaaactatccatgcttttgagcttgacactggagtg
aagtttttaaagagtcatcactttcctcaaacatccaaggaagccactgctgctgagtcc
ctgtgtaaagaaagttctgtcatccaaagtaagggcttcagaaacaggagaaaaagtgct
aaaggcaatgaacaagaaaacatcaccttgcaggaagctagtgtgaatattcagcttaca
gatgccaaaatgtgtcacccaagaaacaagccccagaaatctgattctcaaaagggtact
tatatagagtttggctctgaatcatctgaagagttttttaaacaggcaaccaaaactggg
tttgaagacaaaggagcagttcaggtttctcctcaagtaagtctggaagaatttgagagt
gctgagaaagggaatgaaaattcttgcaatgcacagcctgacaagctgtgtgccaaagaa
atagctctcccaaatgtcacaggtgaaagtgatttctcaaaggaatgcttgagcaagaaa
agcactcagagcatcactgaatgtgccaagcctgaccaagtgaatgtgactgaatgccag
agttctcctttaaatcttcttgctgtagacctgctcccagagcagtgtgacagaataggt
gatgccagtcccacacttgatggggacacatcattcttcaagaacacagaagaaatggat
gaacagcaaactcagtaccacagtgaaaacagagggtttgatttagaaggtatctcagag
ggcaagctggataaaagcaagggaatagatactgatgtacaaaatgtagaagctgtagag
gcatgtgaacctgagaatgactctttccatgaccaagagcttcctctggagcagatacct
cagccagagacacttcactctgccaccccaaataaagtctccaagaagagactgaaacag
agcattcagaaagtcaatgaatggttttcaaaaagcaatgagattttgtcttccagttct
tccttggatgaatctgctgcatcagctgatgtttcagatgaaggagatctgtgtttatca
gataaagagtcctgtatttcagaaaagactgaccctatggcagattccatggaaattgca
gcagtggaagggaaaaagaggcaatcaaaacaaactgcagaaagcatcaaagacaaaata
tttggaagaacatacaaaagagggaggaaatcaaatcccccttctaccttgagagccatt
ttgcctactaggagaaaggaagatgtggctgctggtaagtgcctgaagaatttcagcaaa
gacagactcaaacaaaagaggaagtctgcctgtgtcctgcaacctgaggatttcatcaag
aaaaaggatacagaagtggcagatgggggccctcaaagtgatgataggggccttggagat
gctggaaagaaaagatgtgatggaagtgttgctgttaatgagagtcacctctctcaggat
agggcaaataatacactaacagaacttgggaaaggaggagagtccacattgaagaaagct
actgagaaggtccctgccaagagctgtgatgaggacccaaaaatgcataactgtgatcag
aaaaacaccaaaaaaagaggttctgcagcaaaaagatgcaggcattctagcagaactatg
tgttctctacagctagtagtggatagagactctgtttttcctgatgcagctgagccacag
attgacagctatccaagcagtggggagcccaggaaagctgactctgagcaaaatccagtc
agacgcagcagaaggcttcagttactttctgcagaaatgaaaaaagaaacaaagaaagaa
gtagagggggcaagagagaataacagtgagcatggaaggtctgtctctggagaccaaagg
agtggggcagctcactctgctaaatgcaaagatctgcatgagcctcaagatgagtcgagt
tacaggccagtcactaatttggagggaggtgatctggaagcaaatgaaatgcaggttggt
ctaaagaatttacctggcactgcagaaactggaagaagtctgttcagtccttcacatctg
ccttcaaactgtggttccactgtgcctgacacaagttctcaaggcagtgaaatcctaggc
agccctctcctccttccacttccttcagtgtctgctgggcacactgcttctcaaaagact
gaagaggtgtctgaatcacctgctgcttgtccccaggaatgtgggcatgatccacaaagt
gttccaggggacttcaaaagtgaaaagttgccaatggctaaaaatgttttggagttgact
aaggaagctgaagacggtgacttagacactcagtatctgcgaaacatattcaggcattcc
aagcgttcatccttcagcctttttcagactcccaggcaggcacatgcagtgaaaaatcct
ccttctgataccttaactctatcatgtgctgctcaggtagaaaataaggctaccaaacaa
ttacaaccagaaagcttgcaagaggagaaaacagctgctcaaaacttgagcagggtttct
gagaaagagaagcttaaggcctctgagtctgcccttgttgatcctgtgccttgctctgct
gtcagcacaggagagcacagggatgacatttcacaggctgcagaggaagggactctgaca
ccagcaagaacaggcactgctcagactgagcacaagaatggattgctacaagaagagcag
gacaacgaaaagccagagatagggatagaaagtgagttgagacagaatcccatcaaaagt
ggtggaagccagagtgatcagagtaacacagagcatgatgattccagacaaaatgattta
aattcaggtcaggaaatcagcttcagttcagaaagcaatcaggcaggaaagactgaactt
gttgattgcaaaggaccaattctacattttcaatccacatcaatgatttgtcctgcaact
tgtgagcaaaaccctgctgaattcagctgtgaagtcactgggacaaaaaatagcaaaaga
gaaagaatacctataaaggggaatgaagaacaagcagcccaaactgttagcacagcagtg
cccaagtcttcagctgcagaggctctggaggaaccacttagagagaatcatgatcttaga
ggtttgtctgaaacccctgatggtttactgtgctctgatactgatattgaggacaccagt
ttatgtgaaactgataggaaagaacaatctgcagtgtttgtaaaaagtgacagtgccctg
ggaaaagagctgcacaatagaaatggaagttctgagccaagatctcaagatatccaaaag
tctcgaagacgagtgcagaaactgccatcttcagatgaggggtcctgtgaggatgaagac
ttgccatgttttcaggcattaatcttcagcaaatcagtaagcacacctttgcagactgat
aaacaaatggcatctttggtagagtgtgcagtgagtcccagcatgtcccctcacagtgtg
agcaatgatgacaatattgtgcagaaagtgcctgaagctgccctaagtaatgtgtgtgtt
tcaccaagccaggggtcagaatgctctgtcaacttattttcttcccagtccaacatgtct
gaagaatcacctgatggagcacaagaactcaagaaagatttaccagaagctcatgagtcc
aaaaatatgaacagtgtaaatgacagtaaagaaactcagaattgtaatgaagggctgaag
acaagcaaagatgaatgccaagaagacccagacatgggagcaaacctaggtgaagctgaa
tctggatctgacagtgaaataagtattgtagaagattcctgtggaccattctctcagggg
gaaatcctcactacacagcagaagaatgctatgcaaaacagcctgaaaaaacttcagcaa
gaaatggctgcacttgaagcagtgctaaagcagaatggaagtcagaactgtgaagtttta
cctgtccatagggagctgccaccttccagtactaaaggagcttttgaaaaggaacaaaca
aggaaagaaaaaaacaggtctccagaattgttgcttccatcttctaaattatctttaaca
aagagattggatgtggggagaggccctgagtgtgacagtgttctgaagaacaaaactccc
tctgaaaagacaaaacctgtgcaggaggcagtgcaagagcacaggcagtgtcagcttgga
gcagaagatgcagaggagcagaaatctgggaccatgcaaaacactgcatctgtctcatca
gatctttttnggaatgtgacccagagtacagataactcttcctcctctctaggacttttt
atccctcaaactgcagaagccacaggtgggcctgttgtagctcagaacactgatcaaagc
tgtggcccagggcacaaattaaagagaagtgcatgttttcctgtgcctgttctacacaat
gcagctgggaaagaaaatgctgcaagtccagttgtgtccaagaggaaagaaatgtcaatt
gtggcatcaggtctaaatcacagtgagcatttggtggtccagaagtttgtgaaaaaaact
cagagcactttatctaatcacattactgaaggaacaacccatgtcataatgaaaacagat
aaggagatggtgtgtgaaaggacactgaaatatttcctgggcattgcaggaggaaaatgg
gtactgagttaccagtggataatccagtcttttaaagaaggaagaatactggatgaggag
ccctttgaagttcgaggagatgtagtcaatgggagaaaccatcaaggtcctaagagggcc
agacaggccctgactgaaaagatctttaaagactttgagatctgttgctgtgggcctttc
actgatatgactacagagcatctggagtggatggtggagctctgtggtgcctctgtggtg
aagcagcctgacctgttctcacacacagcaaattccactgctgttgtggttgtgcagcca
gatgcttggaaggaaaacctggattacagagcaatcccccagcagagcaatgttgccgtg
gtaactcgggagtgggtcctggacagcgtggcttgctacaaatgccaggagatcagtgct
tacctcctgtcctaa
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integrated database retrieval system
