Oenanthe melanoleuca (Eastern black-eared wheatear): 130265551
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Entry
130265551 CDS
T09236
Symbol
RIGI
Name
(RefSeq) antiviral innate immune response receptor RIG-I
KO
K12646
ATP-dependent RNA helicase DDX58 [EC:
5.6.2.6
]
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Pathway
oma04622
RIG-I-like receptor signaling pathway
oma04623
Cytosolic DNA-sensing pathway
oma05164
Influenza A
oma05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
130265551 (RIGI)
04623 Cytosolic DNA-sensing pathway
130265551 (RIGI)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
130265551 (RIGI)
05168 Herpes simplex virus 1 infection
130265551 (RIGI)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
oma04054
]
130265551 (RIGI)
Enzymes [BR:
oma01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
130265551 (RIGI)
Pattern recognition receptors [BR:
oma04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
130265551 (RIGI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIG-I_C
CARD_2
RIG-I_C-RD
DEAD
ResIII
Helicase_C
AAA_19
AAA_22
AAA_25
Motif
Other DBs
NCBI-GeneID:
130265551
NCBI-ProteinID:
XP_056370674
LinkDB
All DBs
Position
Z:complement(30185526..30211441)
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AA seq
927 aa
AA seq
DB search
MTAEEKQNLRCYRRYIERSLNPVYVLSNMTDWLSDEVKERVRKEEEKGVTAAAALFLDAV
LLLEADGWLRGFLDALVAAGYTGLAEAIENWDFSKLEKLELHRQLLKRIEATMLEVDPVA
IMPYINMCLIERDCDEILQISEYRSKAAGITKLIECLCRSDKENWPKSLQLALDNAGYYN
ASELWNIREENGKDVDGEMTDASENYFETMVTFSEEAECDNLSENLSSVSESMYESSSVY
KPKKARSYQIELAQPAVDGKNTLICAPTGSGKTFVALLICEHHLQNIPSGQKAKVVFLAT
KVPVYEQQKNVFRRHFERSGYSVQGICGETVANISVEKVIQDSDIIVLTPQILVNSMEKG
ILSSLSIFTLMIFDECHNTTGNHPYNVLMTRYLDQKFDSSANQLPQIVGLTASVGVGNAK
STNETVEHICTLCSYLDIQAISTVRENKEDLQRFGNKPETHIRWVKMRAQNHFADIISGL
MSETEMLMRKIYSVDTISQINKNYLGTQRYEQWIVSTQKKCRLLQLEDKEKESSICRDLF
ICTEHLRKFNDSLIIGEDARIEDALAYLNEFFTNVKNGPYTELEKKLTEKFQEKEPELTA
LSKDESNENPKLEELACILDEAYRYNPETRTILFAKTRALVAALKKWIEANPVLSHIKPD
VLMGRARRDHKTGMTLPMQKGVLDAFRNDKDIRLLIATSVADEGIDITECNLVVLYEYFG
NVTKMIQVRGRGRARDSKCILVTSKTEVVENEKLNRYKEEMMNAAIEKLQNWDETTFSRT
ICRLQRREKGLRDSKKNETKPEAMKGKKKLLCGKCKVYVCSTDDIRIIKESHHTVLGDTF
KERYITKPHRKPVKFDDFVKKCKMHCRNAECQHDWGITVKYKTFDNLPVIKIKSFVLEDI
ETGTQMDFQKWKSINMSLKNFDEDTFS
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atgacggcggaggagaagcagaacctgcggtgctaccggcggtacatcgagaggagcctg
aaccccgtgtacgtcctcagcaacatgacggactggctgtccgacgaggtgaaggagagg
gtccgtaaggaggaggagaagggggtgacggcggccgccgcgctgttcctggatgccgtg
ctgctgctggaggcggatggctggctccggggattcctggatgcgctggtggctgcaggt
tatactgggctggcagaagcaattgaaaactgggacttcagcaagctggaaaaactggag
ctgcacaggcagctgttgaagaggatagaagcaacaatgctagaagttgatcctgtagca
atcatgccatatataaacatgtgcctgatagagagggattgtgatgagatcctgcagatc
agtgaatacagaagcaaagcagctgggataaccaaactcattgagtgcctctgtcgctcg
gataaggaaaactggcccaaaagtcttcagctggcactggataatgcaggatattacaat
gcaagtgaactgtggaatataagagaagagaatggcaaagatgtggatggtgaaatgaca
gatgcttctgagaattactttgaaaccatggtgacattttctgaagaagcagaatgtgat
aatctcagtgaaaatctctcttcagtttcagaaagtatgtatgagtcttcgtctgtttat
aaaccaaagaaggcccggagctaccagattgagcttgcacagcctgctgttgatgggaaa
aacacattgatttgtgcccccacaggatctggaaaaacttttgtggcacttctgatttgt
gaacatcatttgcaaaacattccctcaggacaaaaggcaaaggttgtcttccttgcaacc
aaagtgccagtgtatgagcaacagaaaaatgtgttcaggcggcattttgaaaggagtgga
tactctgttcaaggaatttgtggtgaaacagttgcaaatatctccgtagaaaaggttata
caggacagtgacatcattgtgctaactccccagattcttgtgaatagcatggagaaaggg
atccttagctccctctccatcttcactctgatgatattcgatgagtgccacaacactaca
ggcaaccacccttacaatgtgctgatgaccagatacctggaccaaaaatttgactcctct
gcaaaccagctgcctcagattgtaggtttaactgcttctgttggagttggcaatgccaaa
agcactaatgaaactgtagagcacatctgcaccctctgctcctaccttgacatacaggcc
atatccactgtcagagagaacaaagaagatctgcagaggtttggaaacaagcctgaaaca
catatcagatgggttaaaatgcgagctcagaatcactttgcagacattatctcaggtctg
atgtctgagacagagatgttgatgaggaagatttattcagtggataccatctcccaaatc
aacaagaattaccttggaacacagagatatgaacaatggatagtttccactcagaagaaa
tgcagactgttgcaactggaagataaggagaaggagagcagtatttgtagagacctgttc
atttgtactgagcacttgcggaaattcaacgactctctgattatcggtgaagatgctcgc
atcgaagatgctttagcctacctgaatgaatttttcacaaatgttaaaaatggaccatat
acagagttagagaagaaactgacggagaaatttcaagagaaagagccagagctgactgcc
ctttcaaaagatgagtcaaatgagaatccaaagttggaggagcttgcttgcatcctggac
gaagcataccgctataacccggagactcgcactattctctttgccaagacaagagcctta
gtagctgctttgaagaagtggattgaagcaaaccctgtacttagccacataaagccggat
gtgttgatgggtagagcaagaagagaccataaaacaggtatgaccctgccgatgcagaag
ggtgtactggatgcattcagaaatgacaaagacatcagactgctaattgctacatctgtt
gctgatgaaggcattgatattactgagtgcaaccttgtggtgctctatgaatactttggt
aatgtcaccaaaatgatccaagtcagaggtcgtggaagggcaagagacagcaagtgcatc
cttgtgacaagcaaaacagaagtggttgaaaatgaaaaactaaaccgttacaaggaagaa
atgatgaatgcagctattgaaaagctacagaactgggatgaaacaacattctcgagaacg
atatgtcgcctgcaaaggagggaaaagggactacgagattctaagaagaacgaaacaaaa
cctgaagcaatgaaagggaaaaaaaaacttttgtgtggaaaatgcaaagtgtatgtctgc
agtacagatgacatcagaattataaaggaatctcatcacactgtcctgggtgacacgttc
aaggagcgttacataacaaagccccacaggaaaccagttaagtttgatgattttgtgaaa
aaatgcaagatgcattgccgaaatgctgagtgccagcacgactgggggatcacagtgaag
tacaagacatttgataatctaccagtgatcaaaatcaaaagctttgtactagaggacatt
gaaactgggacacaaatggattttcagaaatggaaaagtattaatatgtctttgaaaaat
tttgatgaagatacattcagctga
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