Oenanthe melanoleuca (Eastern black-eared wheatear): 130267080
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Entry
130267080 CDS
T09236
Symbol
NR1H4
Name
(RefSeq) bile acid receptor isoform X1
KO
K08537
farnesoid X receptor
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oma03000
]
130267080 (NR1H4)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
oma03310
]
130267080 (NR1H4)
Transcription factors [BR:
oma03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
130267080 (NR1H4)
Nuclear receptors [BR:
oma03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
130267080 (NR1H4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
130267080
NCBI-ProteinID:
XP_056372371
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Position
1A:complement(25921356..25956520)
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AA seq
477 aa
AA seq
DB search
MGSEMNLIGHHQLATADGFPLAEGPHLFGVLSEPMSSPVQEADVSPYAQYNNVPFPQVQP
QISSPPYYSNLGFYPPQHEEWYSPGMYELRRLPSETFFTRETEIMDIPAAKKPRLGHSTG
RVKGEELCVVCGDKASGYHYNALTCEGCKGFFRRSITKNAVYKCKNGGNCEMDMYMRRKC
QECRLRKCKQMGMLAECMYTGLLTEIQCKSKRLRKNVKQPPDQTVSEDNEGHDVKQVTST
TKIYREKIELTPEQQKLLDYIMDSYSKQQIPQEVSKKLLNEEFSAEGNFLILTEMATSHV
QVLVEFTKKLPGFQTLDHEDQIALLKGSAVEAMFLRSAEIFSKKLPTGHTVLLEERIRNS
GISDEFITPMFNFYKSIGELKMTQEEYALLTAIVILSPDRQYIKDRDSVERLQEPLLDIL
QKVCKLHHPDNPQHFACLLGRLTELRTFNHHHAEMLMSWRVNDHKFTPLLCEIWDVQ
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgggatctgaaatgaatttaataggacatcatcagctagccactgctgatggatttcct
cttgctgaaggtcctcatttgtttggtgtcctttcagaaccaatgagctctccagtgcaa
gaggcagatgtgtcaccttatgctcagtacaacaatgtgccatttccccaggttcagcct
cagatctcatcgccaccttattactccaacctaggcttctaccctccacagcacgaggaa
tggtattcccctgggatgtatgaactcaggaggctaccctcagagacctttttcacaagg
gagacagagatcatggatattcctgcagccaaaaagcctaggctgggtcactccacagga
agagtgaaaggagaagagctctgtgtggtctgcggtgacaaagcctctgggtaccactat
aatgcccttacttgtgaaggatgcaaaggattcttcagaagaagcatcaccaaaaatgca
gtatacaagtgtaaaaatggaggcaactgtgagatggacatgtacatgaggagaaaatgc
caggagtgccgtctgaggaaatgcaagcagatgggcatgttggctgaatgtatgtataca
ggtctcttaacagagatacagtgcaagtcaaaaaggctacggaaaaatgtgaagcagccc
ccagatcagacagtcagtgaagacaatgaaggccatgatgtgaaacaagtcacttctaca
actaaaatatatagggagaagatagaacttaccccagaacagcagaaacttcttgattat
attatggattcatacagtaaacaacaaataccccaggaagtgtcaaaaaaactattgaac
gaggaattcagcgctgaaggaaattttctgattttaacagaaatggccaccagtcatgtg
caggttcttgtggaattcaccaaaaaactaccaggcttccaaaccctggatcatgaagac
cagattgctttgctgaagggctcagcagtagaagccatgttcctgcgttcagctgagatt
ttcagcaagaagcttcccacggggcacactgtccttctagaagaaagaattcgcaacagt
ggtatctcagatgaatttataactcccatgtttaatttttataaaagcattggagagctg
aagatgacacaggaagaatatgcactgctcacagccatagttatcctgtctccagatcgg
caatacataaaggacagagattctgtggaaaggcttcaagaaccactgctggatattcta
caaaaagtctgcaaacttcaccacccagataaccctcaacactttgcatgtcttctgggc
cgtctcacagaattacggacatttaaccatcatcacgcagagatgctgatgtcatggaga
gtgaacgaccacaaattcacacctcttctctgtgagatctgggatgtgcagtga
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