Onychostoma macrolepis: 131522734
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Entry
131522734 CDS
T09350
Symbol
traf3
Name
(RefSeq) TNF receptor-associated factor 3 isoform X1
KO
K03174
TNF receptor-associated factor 3
Organism
omc
Onychostoma macrolepis
Pathway
omc04620
Toll-like receptor signaling pathway
omc04621
NOD-like receptor signaling pathway
omc04622
RIG-I-like receptor signaling pathway
omc05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
131522734 (traf3)
04621 NOD-like receptor signaling pathway
131522734 (traf3)
04622 RIG-I-like receptor signaling pathway
131522734 (traf3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
131522734 (traf3)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
zf-TRAF
TRAF3_RING
zf-C3HC4
Crescentin
zf-C3HC4_2
EzrA
ATG16
zf-RING_UBOX
CENP-K
zf-rbx1
Sina_ZnF
zf-RING_6
AAA_13
zf-C3HC4_4
DUF1664
zf-TRAF_2
zf-RING_4
FapA
Exonuc_VII_L
BLOC1_2
Laminin_II
IFT57
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
131522734
NCBI-ProteinID:
XP_058604382
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Position
17:complement(16518914..16535663)
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AA seq
574 aa
AA seq
DB search
MSAGRNVEQQIALQQRPPSLAMPSMAQRPRPEPGFLPQHGGFKDHFVTTPEAKYRCESCR
HVLCNPRQTECGHRFCESCITDLLSKPNPVCPADLEPLFEDKIFRDVCCNREIMTLKVHC
RSEKNGCKEQMSLQQVMDHLEVCPYFEVPCPLGKCKEKMMRKDMSEHLSRKCKHREITCE
FCNHKMALTELQKHKDTVCPAFPVTCPNHCSFSSILRSELSSHQHDCPKAQVTCSFIRYG
CSFKGLNQEMREHESSYASEHLRMMAVRNTALEAKVEEVKSDLMERYKVLPSLSSRLAEV
ETQYEEMREKNRQLEQKLTSMQKLMSNHSEKLLEVEMELRELRPLRAMREEVEALRGSVE
NMRSIVSSLDSGRVGSSSGSHTLAGSLEQQLSRHDDMMSVHDIRLAEMDLKLQVLETASF
KGTLIWKIRDYKRRKQEAVASKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLF
FVVMRGEYDALLPWPFKQKVTLMLMDQGPARKHLGDAFKPDPNSSSFRQPTGEMNIASGC
PLFVAQTVLENGTYIKDDTIFIKVTVDTSDLPDP
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcagggcgtaatgtggaacagcagattgccctgcagcagcgtcctccatctctt
gccatgccctccatggcccagcggcccaggcccgagccaggattcttgccccagcatggc
ggatttaaggaccactttgtcacgacgcctgaggccaagtatcgctgcgagtcttgcagg
catgtgctctgtaaccctcggcaaactgagtgtggacatcgcttctgcgagagctgcatc
acagacctgctcagtaagcctaacccagtttgcccagctgatctagaaccactctttgaa
gataagatattccgggatgtttgctgcaatagggaaattatgactctgaaggtccactgc
cgaagtgagaaaaatggatgtaaagaacaaatgagtttacagcaggtcatggaccacttg
gaagtttgtccgtacttcgaggtgccatgccccttgggaaagtgtaaggagaagatgatg
aggaaagacatgtctgagcacttgagccgcaaatgcaaacaccgagagatcacctgtgaa
ttctgcaatcacaagatggccctcaccgagttacagaaacacaaagatacagtctgtcct
gcatttcctgtaacatgccctaatcactgctcgttttcttccattctgagaagtgagctg
tccagtcatcagcacgactgtccaaaggcccaagtgacctgctcctttattcgctacggg
tgctcctttaaggggctgaatcaagagatgagggaacacgagtccagttatgcgtctgag
cacctgagaatgatggcagtcagaaacaccgcactagaagccaaggtagaggaagttaag
agtgatctgatggagcgttataaagttctgcccagcctcagcagtcgtcttgcagaggtt
gagactcagtatgaggagatgagagaaaagaacaggcagctggagcagaagctaaccagc
atgcagaagctgatgagcaatcactccgagaaactgcttgaggtcgagatggagctgcgg
gagcttcgtccactgcgagctatgagggaggaggtggaggctctgagagggtctgtggag
aacatgcgttcaattgtatcttctctcgattcgggtcgtgttggttccagttctggttct
cacacgctggcaggttccttagagcagcagctctcacgtcacgatgacatgatgagtgtc
catgacatccgcctggcggagatggaccttaagctgcaggtgctagagacggccagcttc
aaaggtacactcatttggaagatccgtgactacaaaagacggaaacaggaagccgtggcc
tcaaaaaccctctcgctctacagccagcccttctacacgggctatttcggctacaaaatg
tgtgcccgcgtctatctgaatggggacggaatgggtaaaggcacacatctctcgctgttc
ttcgtggtcatgcgtggggaatacgacgccttgctgccgtggccgttcaaacagaaagta
acattaatgctaatggaccaggggccggcgaggaaacacttaggcgatgccttcaaaccg
gacccaaatagcagtagctttcgccagcccactggtgaaatgaacatcgcctcgggctgt
ccactctttgtggctcaaactgtcctagagaatggaacctacatcaaagacgacaccatc
ttcattaaggtgactgtagacacctccgacctcccggacccttga
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