Onychostoma macrolepis: 131522965
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Entry
131522965 CDS
T09350
Symbol
ltbp1
Name
(RefSeq) latent-transforming growth factor beta-binding protein 1 isoform X1
KO
K19559
latent transforming growth factor beta binding protein 1
Organism
omc
Onychostoma macrolepis
Pathway
omc04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
131522965 (ltbp1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
omc04990
]
131522965 (ltbp1)
Domain-containing proteins not elsewhere classified [BR:
omc04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
131522965 (ltbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF
hEGF
EGF_3
FXa_inhibition
Plasmod_Pvs28
EGF_MSP1_1
EGF_2
Motif
Other DBs
NCBI-GeneID:
131522965
NCBI-ProteinID:
XP_058604859
LinkDB
All DBs
Position
17:12506566..12588913
Genome browser
AA seq
1664 aa
AA seq
DB search
MAVLMWDIIVSLTLLISPASLSADKSGFRKLYVLQPGPSGTDGVHVSSISSLSGASGQPH
SYNVELKASFGGQVRTRRMGHQSNPNPSIPIRQDAQPGRHATSHHMKMSGVNVCGGQCCV
GWSKTPGSQRCTKPNCMPPCKNGGMCLRPHICVCKPGSKGKSCEQTTLPPSSHPTGPLNG
HTNGGLPNGGHTNGYPNGHNVIPQRPIPQQIFPQGQGQVPLPLPSTNMGHLTLSMKPSPN
GPIPYQPQVQNPVSMTMHQSKTQKFMVQQKNYHTHTQVHGVGPTLNRAIPLSVGHNPLNV
GNHTGRIKVVFTPTICKMTCINGRCQNSCQQGNTTTIISENGHATDTLTAPNFRVVVCHL
PCMNGGKCSARDKCQCPPNFTGKFCQITNPNGHQGQHTVINGQKTHVHSTHTLPLTYGTG
QNQGLVNVHVKHPPEASVQIHQVSPVDSNGQVKNTQSSHTFTYHSSSSQSIQHGHTHSGV
IYPNQQTYPQYQPVTSKNQLGRCFQETAGMQCGKALPGLSKQDACCGTVGTSWGFHKCQK
CPKKTSIPLIECPQGYKRLNATRCIDIDECQIQGVCPNGNCINTMGSYRCICNPGFVPDP
SLTTCFSETPALREEKGACFRLVSSGKQCLHPVSTQLSKQLCCCSVGKAWGPHCDHCPLP
GTAAFKEICPGGMGYHVTTPYIYKPKPPNGHSQTDGHGQSKPTIRHQAPVDPPMPFPTLQ
QPVEALSITERQLPVPTVPRQELYTHMSVDRSVVQPGQAQLSPGVSTIRMEPALPEVVEK
VSPPAPVPLPPSIESQDISPTQLAEIDECQVKPDICGAGICYNTADSYKCICDDGYRIDS
EGTTCVDVDECAESPSLCANGHCQNTPGGFLCACEPGFMPNEKGTSCSDIDECQDGRVCP
SGLCYNTLGSFMCSPCPDGFEGRNGQCVDINECLDEKVCAHGQCFNREGYFVCTCDEGFS
LTPDGKACIDIDECQDDSVCIQGHCQNTEGSFICNCEPGFILSSTGDQCNDVDECLELPQ
TCDGVGQCVNILGSYQCNCPQGYRQVNGTSCQDVDECEDETQLCVPNGECLNTEGSFLCV
CDAGFVSTRDPPGCEDVDECVDGSRCVNGTCSNTEGSYLCHCDAGYRLEPTNQTCQDIDE
CADLGTSICGVWACQNTPGSYRCEVPCPPGLSRGEHAVCIDVDECSLNENTCGSHGVCQN
TIGSFSCQCDPGFKDSQDGQGCVDVNECELLGNVCGEATCENREGTFLCLCPDEMQEFDP
MSAKCFSTPPDTPVERKECYFNLNDENLCDKVLASSMTKEECCCTLGAGWGDNCEVHPCP
IPGTDQFSQMCLAGRGYIPPEDPMIPTTSLAGSFKDADECKLFENEICKDGFCLNTPGGY
ECYCKAGLYYDESKLQCVDTDECADESNCIDGKCMNTYGSYQCFCTPPQVLGPDSTRCIL
PAVAGQRETDVYPGICWETVTERLTCTKPFANLQTTFTECCCLYGDAWGMDCALCPYKNT
EAYATMCNIRQSSGPRRPYDQDALVAGPVTEYGPEYDSRPLNPDGTLPLYEDYEEPRNPY
DAFEGLRAEECGVLNGCENGRCVRVQEGYTCDCFDGYTLDMSRMACVDINECSELNTKMS
LCKNGKCINTQGSYKCVCLPGFVHSAQHNYCVPQRQNATSTSTE
NT seq
4995 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgcttatgtgggacatcattgtttccctaacattattgatttctccggcttcg
ctctcagcggataagagcggcttcaggaaactgtacgtgcttcagccgggaccgagcggt
acggacggggttcacgtgagctctatttcatcgctctcgggagcgtcgggacagccgcac
tcctacaatgtggagctcaaagccagcttcggcggccaggtccgaacccgcagaatgggt
caccagtcgaacccgaacccgagcattccgatccgccaggacgcgcagcctggccgacac
gcaaccagccatcatatgaaaatgtcaggagtgaacgtctgtggggggcagtgctgtgtt
ggttggagcaagaccccaggatctcagcgctgcactaaacctaactgtatgcccccatgc
aaaaatggtgggatgtgcttgcggccccacatttgtgtgtgtaaaccaggctctaaaggc
aagtcctgtgaacagaccactctgcccccatcctctcatccaactggaccattaaacgga
cacaccaatggtggacttccaaacggaggtcatacgaatggatatcccaatggtcataat
gtaattccccagcgtcccattcctcagcagatcttcccacaaggccaaggtcaagtgccg
ttaccgttgcccagcaccaacatgggacatctgactctgtccatgaagccatcacctaac
ggacccattccttatcaaccacaagtacaaaacccagtttcaatgacgatgcaccaaagc
aaaacccagaaattcatggttcaacagaaaaactaccacactcacacacaggtgcacgga
gtcggacccaccctgaaccgggccatccctctttcagtgggacacaatccactaaatgta
gggaaccacacaggccggatcaaggtggtcttcaccccaactatctgcaagatgacctgt
attaacggccgctgtcagaacagctgtcagcagggcaacaccaccactatcatcagtgag
aacgggcatgctacggacacactcaccgcccccaacttcagagtcgttgtttgccatttg
ccctgcatgaatggaggaaaatgcagcgctcgggacaagtgccagtgcccaccaaacttt
actggaaaattctgccaaattacaaatcctaatggtcatcagggtcaacatactgtcata
aacggacagaagacacatgtccactcaacgcacactttacccctcacctacggcaccgga
caaaaccagggtttggtgaatgtccatgtgaaacatcctccagaagcctctgtccagatc
catcaggtgtctccggtggacagtaatgggcaggtcaagaacacacagtccagccacacc
ttcacctaccacagcagcagcagccagagcatccaacacggacatactcacagtggcgtc
atttaccccaaccagcaaacatacccccaataccagccggtgacttccaagaaccagctg
ggacgctgcttccaggagactgctggaatgcagtgtgggaaagctctgcctggcctgtct
aaacaagatgcctgttgtgggacggtgggcacatcatggggattccacaaatgccaaaaa
tgccccaagaaaacatcgattcctttgattgaatgtcctcaaggctataagaggctgaat
gccactcgctgtatcgatattgatgagtgccagattcaaggagtttgtcccaatggaaac
tgcataaacaccatgggaagctacagatgtatctgcaacccaggctttgtgcctgatccc
tctctgaccacctgcttctccgaaacacctgctcttcgcgaggagaaaggtgcttgcttc
cgattggtcagttcggggaagcagtgtttgcaccctgtgtccactcagctgagtaaacag
ttatgctgttgtagtgtgggcaaggcctggggtcctcattgtgaccactgccccctacct
gggacagctgcgtttaaagaaatctgtcctggaggaatgggttatcatgtcaccacacca
tacatttacaagcccaaacctcctaatggacacagccagacagacggtcacgggcagagc
aagcccaccatcagacaccaagcacctgtggatcctcccatgcccttccccaccctacag
cagcccgtggaagctctcagcatcacagagaggcagctacctgtgcccacagttccccgg
caggagctttatacccacatgagtgttgataggtcagtagtacagcccggacaggcccag
ctgtcacccggggtgtctacaatcaggatggagcctgccctcccagaggtggtggagaag
gtgtcaccacccgctcctgtgccacttccgccctccatagaaagtcaggacatctcccca
acacagctggcagagattgacgagtgtcaagtgaaacctgatatctgtggtgcaggaatc
tgttataacactgctgacagctacaagtgcatctgtgatgacggctatagaatagacagt
gagggcaccacatgtgtagatgtcgacgagtgtgcagagagcccaagtttgtgtgctaat
ggtcactgtcagaacactccaggcggattcctgtgtgcgtgtgagcctggcttcatgcct
aacgagaagggcaccagctgctctgatatcgacgaatgtcaggatgggagagtgtgtcca
tccggtctctgctataacactctgggctctttcatgtgttcaccttgtccagatgggttt
gaagggagaaatggccaatgtgttgatataaatgagtgcctggatgaaaaagtatgcgct
catggtcagtgcttcaatcgggagggctatttcgtttgcacatgtgatgaaggattctcg
ctcactcctgatggcaaggcctgcatagacatcgacgaatgccaagatgacagtgtgtgc
atccaaggtcactgtcagaacacagaggggtcgtttatctgcaactgtgagcccggcttt
atattgtcgtccacaggagaccaatgtaacgatgtggacgagtgtttggagttacctcag
acctgtgatggtgtggggcagtgcgtcaatatcttgggatcttaccagtgcaactgccca
cagggatacagacaagttaacggcaccagctgccaagatgttgatgagtgtgaggacgag
acacagctgtgcgtccccaatggagagtgtttgaacacagagggttcgttcctgtgtgtt
tgtgatgccggctttgtatccaccagggatccaccaggctgtgaggatgtagatgaatgt
gtggatggcagcagatgtgtaaatggtacctgttcaaacacagagggttcgtatctctgc
cattgtgatgcaggctaccgcctggagccaaccaatcagacgtgccaggatattgatgag
tgtgctgacttggggacgtctatttgtggggtttgggcctgtcagaacacaccgggctct
taccgatgtgaggtgccctgcccacctggcctttcccgaggcgaacacgccgtctgcatc
gacgtggatgagtgttctctgaatgagaatacctgtggaagtcatggtgtttgtcagaat
acaataggctccttcagctgccagtgcgacccaggattcaaggactctcaggatgggcag
gggtgtgtggatgtgaacgagtgtgagctgctcggtaatgtgtgtggtgaggccacctgt
gagaatcgtgaaggcaccttcctgtgtttgtgtcctgatgagatgcaagaatttgatccg
atgtcggccaaatgcttctctacaccaccagacacaccagtggaaaggaaggagtgttat
ttcaacttgaatgatgagaacctgtgtgataaggtgctggccagcagcatgactaaagag
gagtgctgctgtacgctaggagccggctggggggacaactgcgaggtccatccctgcccc
ataccgggaacagatcagttctcccagatgtgtctggcaggccgaggttacattcctcct
gaagatcctatgattcctacaaccagcttagcaggaagcttcaaagacgcagatgaatgc
aagctttttgaaaatgagatctgcaaagacggcttttgtctcaatacccccggtgggtat
gagtgttactgcaaggctggactctactatgatgagagcaaactgcagtgtgttgacact
gatgaatgtgcggatgaatcaaactgtatagatggtaaatgtatgaacacatatgggtca
tatcagtgtttctgcactccgccccaggttcttggaccggacagcactcgctgcatttta
cccgccgtggcagggcaaagagaaactgatgtgtacccaggtatttgctgggagaccgta
acagaaaggctgacctgcacaaagccctttgccaatctacagaccacgttcacagaatgc
tgctgtttatatggagatgcctggggcatggattgtgctctctgcccctacaaaaataca
gaggcctatgccactatgtgtaatatccgtcagtctagtggcccccgtcggccgtatgat
caggatgctttggtcgctggcccagtcactgaatatggccctgaatatgactctcgacct
ctgaaccccgacggcacgctgcccctctatgaagattacgaagaaccaagaaatccatat
gatgcattcgaagggctgcgagcagaggagtgcggtgtactgaacggatgtgagaatgga
cggtgtgtgcgggtgcaggagggctacacctgtgactgcttcgatggatacacactcgac
atgtcccgaatggcctgcgtggatatcaatgaatgctcagagctgaatacaaagatgtct
ctttgcaagaacggcaagtgcatcaacacacaaggctcatataagtgtgtgtgtctgcca
ggatttgtccactccgcccagcacaactactgtgtgccccaaagacagaatgcaaccagt
acgagcacggagtga
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