Onychostoma macrolepis: 131523347 Help Entry 131523347         CDS       T09350                                  Symbol thbs1a Name (RefSeq) thrombospondin-1   KO K16857   thrombospondin 1 Organism omc  Onychostoma macrolepis Pathway omc04115   p53 signaling pathway omc04145   Phagosome omc04148   Efferocytosis omc04350   TGF-beta signaling pathway omc04510   Focal adhesion omc04512   ECM-receptor interaction omc04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:omc00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     131523347 (thbs1a)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     131523347 (thbs1a)  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     131523347 (thbs1a)    04148 Efferocytosis     131523347 (thbs1a)   09143 Cell growth and death    04115 p53 signaling pathway     131523347 (thbs1a)   09144 Cellular community - eukaryotes    04510 Focal adhesion     131523347 (thbs1a)   09142 Cell motility    04820 Cytoskeleton in muscle cells     131523347 (thbs1a)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:omc04131]     131523347 (thbs1a)   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:omc00536]     131523347 (thbs1a) Membrane trafficking [BR:omc04131]  Endocytosis   Phagocytosis    Opsonins     131523347 (thbs1a) Glycosaminoglycan binding proteins [BR:omc00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    131523347 (thbs1a) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC TSP1_CFP_C EGF_3 cEGF TSP1_ADAMTS EGF TSP1_CCN Laminin_G_2 Motif Other DBs NCBI-GeneID:  131523347 NCBI-ProteinID:  XP_058605658 LinkDB All DBs Position 17:complement(572541..583370) Genome browser AA seq 1174 aa AA seqDB search MTLRGLVVCLLLWSSVSSRRVEMPDDDTVFDLFELTQVHKKHHGVSLVKGPDPNSPAYKI LNPNLIPSVPELSFRDLIYSIQTERGFIFTANLKQAKRTRGSLVSVERADGTGSVFEIIS NGKANTVDLVYWTASGQHVVSIEDVNVANGHWKNITVFVQEDRAQVHVGCEEINTQELDA PIQQILSQESADIASLRIAKGAAKSDRFMGVLQNVRFVFGTTLDTILRNKGCQSSTFITD VMTLENPVNGSSPAIRTDYTGHKSKDLQDICGFSCDDLSSMFKELKGLGMVVKQLSNELR QVTADNNLIMTQIKIHEGVCLHNGIVYKDKDEWTVDSCTHCTCQNSATVCREISCPLMPC ANATVPDGECCPRCGTPNDAGVDGWSPWSEWTHCSVTCGRGIQQRGRSCDRINSNCDGTS VQTRDCYTQECDKRFKQDGGWSHWSPWSSCSVTCGEGVITRIRLCNSPTPQMGGKDCEGD GRQTEPCRKAPCPVNGGWGPWSPWDSCSITCGGGLQRRHRLCNSPAPKYGGKECMGDSKG TRLCNSQLCPVDGCLSNPCFAGAKCTSFPDGSWKCGECPVGYTGDGVHCQDIDECKEVPD ACFVLNGVHQCVNTEPGYNCMPCPPRYSGKQPFGRGTEQAIANKQVCTPRNPCEDGSHDC NKNANCIYLGIFSDIMYRCECKPGYAGNGYICGEDSDLDGWPNTDLLCVENATYHCKKDN CPDLPNSGQEDYDKDGTGDACDNDDDNDGIPDDGDNCPFTFNPRQYDHDRDQVGDRCDNC PYDSNPEQTDTDNNGEGDACAIDIDGDGILNEKDNCPYVYNTDQRDSDRDGVGDHCDNCP LEHNPDQIDSDSDNIGDKCDNNQDIDEDGHQNNLDNCPYIANANQVDHDKDGKGDACDHD DDNDGVPDDKDNCRLAFNPDQLDSDGDGRGDICKDDFDVDNVPDIYDVCPENFGISETDF RRFQMVPLDPTGTSQIDPNWVVRHQGKELLQTVNCDPGIAVGYDEFNAVDFSGTFFINTD RDDDYAGFVFGYQSSSRFYVVMWKQITQTYWSHTPTKAQGYSGLSIKVVNSTTGPGEHLR NALWHTGDTEGQVRTLWHDPKNIGWKDYTAYRWQLIHRPKTGHIRVIMYEGKKVLADSGS IYDKTYAGGRLGLFVFSQEMVYFSDLKYECRDAS NT seq 3525 nt NT seq  +upstreamnt  +downstreamnt atgactctgagaggactggttgtgtgcctcttgttgtggagttccgtcagcagcagacgc gtagaaatgccggatgatgacaccgtgtttgacctgttcgagctcactcaggtccacaag aagcatcacggggtgagtttagtgaagggacccgatccaaacagccccgcgtacaagatc ctgaacccgaacctgatcccctcagtgcccgagctctccttccgggacctgatctactcc atccagaccgagagaggcttcatcttcaccgccaacctcaagcaagccaagcgcaccagg ggcagcctggtctccgtggagagggcagacggcaccggatccgtcttcgagatcatctcc aacgggaaagccaacaccgtggatctggtgtactggaccgcgagcggacagcacgtggtg tccattgaggacgtgaacgtggcgaacggacactggaagaacatcacggtgtttgtgcag gaggaccgagctcaggttcatgtgggctgcgaggagatcaacactcaagagctcgatgct ccgatccagcagatcctgagtcaggagagcgcggacatcgcgagtctgaggatcgccaaa ggagccgccaaatccgatcgcttcatgggagttctccagaacgtgaggtttgtttttgga acgacgctggacacgattttacgcaataaaggatgccagagctcaaccttcatcactgat gtcatgaccttggaaaaccccgtgaacggatccagtccggccatccgcactgattacacc ggacacaagtctaaagatctgcaggacatctgcggtttctcctgcgacgatctctccagc atgtttaaggagctcaagggactcggcatggtggtgaagcaattgtcaaacgagctccgc caagtgacagcagacaacaatttaatcatgactcagattaaaatccacgaaggggtttgt ctgcacaacggcatcgtttacaaagacaaagatgagtggacggtggacagctgcacacat tgcacttgtcagaactccgccactgtgtgccgtgaaatctcctgtcctctcatgccctgc gccaacgccaccgtcccagacggcgaatgctgcccacgctgcggaacgccgaatgatgcg ggtgtggacggctggtcgccctggtccgaatggacgcactgttcggtgacctgcggcaga ggcattcagcagcgcggacgctcctgcgaccgaatcaacagcaactgcgacggcacatct gtccagacgagagattgttacacgcaagaatgcgacaaacgcttcaagcaggacggcggc tggagtcattggtctccctggtcttcttgctcagtgacgtgtggcgagggcgtcatcact cgcatccggttgtgtaactcccctacgcctcagatgggcgggaaagactgtgagggagac ggtcggcagaccgaaccgtgccggaaggccccgtgcccagtgaatggaggttggggaccc tggtcaccatgggactcttgctccatcacgtgcggtggaggactgcagcgcagacaccgt ctgtgtaacagccccgcccccaaatacggtggaaaagaatgtatgggtgactccaaagga acccgtttgtgcaactcccagttgtgtccagttgatggatgcctgtctaacccgtgcttc gccggcgccaaatgcaccagcttccccgatggctcctggaagtgcggcgagtgtccggtc ggatacactggggatggagtccactgtcaagatattgacgagtgcaaagaagttcctgat gcctgtttcgtgctcaatggagtccatcagtgtgtgaacacagaaccaggctacaactgc atgccctgcccaccacgctactctggaaagcagcccttcggcaggggaacggagcaggcc attgccaacaaacaggtctgcacacctagaaacccatgtgaggacggcagccatgactgc aataagaatgccaactgcatctacctgggcatcttctctgacatcatgtaccgctgcgaa tgtaaaccaggctacgctgggaacggttacatctgtggagaggactctgaccttgacggc tggccaaacacggacctcctctgtgtggaaaacgccacctaccactgcaagaaggacaac tgtcctgaccttcccaactctggtcaagaagactatgacaaagatggaactggagatgct tgtgacaatgatgatgacaatgatgggatccctgatgacggggacaattgcccgttcacc tttaacccaagacagtatgaccacgaccgcgatcaagttggtgaccgatgcgataattgt ccatacgacagtaatccagaacagactgacactgacaacaacggcgagggtgatgcgtgt gccatcgacatcgatggtgatggcatcctgaatgagaaggacaactgtccttatgtgtat aacactgaccagagagacagtgaccgagacggagtcggtgaccactgtgacaactgccca ctggagcacaaccctgaccagatcgactctgactctgacaacattggagacaagtgtgac aacaaccaggacatcgatgaggatggccatcagaacaaccttgacaactgtccctacatc gccaacgccaaccaggtcgaccacgacaaggacggcaaaggagacgcctgcgatcacgac gacgacaatgatggcgtgcctgacgacaaagacaactgccgactcgctttcaacccagat caactggattcggacggagacggacgaggcgacatttgcaaggacgactttgacgtcgat aacgtgccggatatttacgacgtttgcccggagaactttggcatcagtgaaacagacttc cgcaggttccaaatggtccctctcgatcccacgggaacttcccaaatcgaccccaactgg gttgtccgtcaccagggcaaagaacttctgcagaccgtcaactgtgatcctggcattgct gttggttatgatgagttcaatgccgtggactttagcggcacgttcttcatcaacacagac cgtgacgatgactacgccggctttgtgtttggctaccaatccagctcacgtttctatgtg gtgatgtggaaacagatcacacagacttattggtctcatactcccactaaagcacagggt tactctggactgtccattaaagtagtgaactcgaccacaggaccgggcgaacatctcagg aacgctttgtggcacactggagacaccgagggacaagtgcgtactctgtggcatgatccc aagaacattggctggaaggattacaccgcctacagatggcaacttatccacagacccaaa accggacacatcagagtcattatgtatgaaggcaagaaagtcttggctgattcaggaagc atctatgacaagacatatgctggaggaagacttggcctctttgtcttctctcaagagatg gtttacttctcagacctcaaatacgaatgccgagatgcatcttaa

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