Onychostoma macrolepis: 131528630
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Entry
131528630 CDS
T09350
Name
(RefSeq) LOW QUALITY PROTEIN: NACHT, LRR and PYD domains-containing protein 1 homolog
KO
K12798
NACHT, LRR and PYD domains-containing protein 1
Organism
omc
Onychostoma macrolepis
Pathway
omc04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
131528630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omc04131
]
131528630
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
omc04054
]
131528630
Membrane trafficking [BR:
omc04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
131528630
Pattern recognition receptors [BR:
omc04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
131528630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FIIND
NACHT
UPA-FIIND
NLRC4_HD2
CARD
NOD2_WH
Motif
Other DBs
NCBI-GeneID:
131528630
NCBI-ProteinID:
XP_058613903
LinkDB
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Position
02:complement(28765405..28789893)
Genome browser
AA seq
1241 aa
AA seq
DB search
MSESVGWSAADLATVHAAVKSVLHRLQQLAGWRAADSATEHAAVKSVLHRLQQLAGYLNL
KYHTFSDCLKFWKNYELLSDEHVELAARYTEPVIIQRSKEQTEKYCQEYVRSARFWNRTS
SQLLSNDKNHNIRIEQLFSPDCDGITPKTVILVGDSGRGXSFMLEKIMLDWASGELYSEN
FDVVFLLKFDELKCISDEISLNQLLSWSCSLTSDQISQILELTPEKVLYLIDGLDEFSFD
PHIQISSPTDPSQKAPIMDILNCLLRDLLLLESSVIVTIRYTAAAELSNLFKRPQRFTET
MGFSERGVQEYFQKFFQDEQLFRKTYESVKINESLLTACSVPLLCWMVCFCLKKHFTDDD
HVMRELKTTTSIYVHFVSTLLEHHDQSQSVLRSLGQLAEEGVKKQQVLFDEKSVVKTCLN
PATTLFLYKHESFFKFIHFRFQEFFTALYYVLLEEKETWWKVSELFNLMESEAVIYRSSP
IFRGRLSNPIPSVIMFLCGLFNEKISSSLFEKMKSTVPHTIKLKKKLMEIIPAMTRQYGL
ELFALHCLYEFQDERFVSEALKTHRFMDLSNISLRSTDCWVLLYCLQCCPHIRDLNLMYC
DLTAEKLKILQPVLCMCQTLRLSVEHLSEVGDLIQILGEAKILRRLKVQEDEYSAKSPRW
SLDLSVTHGDVLLSLSSSEKNPSFPAVLNISLTCPQSEISSTDWTLFLQKLSKTGKVAEV
FSVLDEHVSLLLSSFHSVGLKMLDLKLVVLNKSWASGIISLVQTCTSLQELSVSVTGLLL
EEGLMLLKKSLTDPHCSVIIEGRKCSKPTVDNWSYSCNEKVEIHFKPKVLKKLEELTISK
PSPPGLNLQPLPVCQSCVHIVDSDQWVQVEPSVCTDEGGSEFRISTPAGRFECSRTRMRW
VCAGDVTLQYRAVDGRFLREELERLQCERIGPVIDVTVISGKLEEAHLPHYACLAESDPS
LTEAVKVVSVKDEGMSLESVELTRFHAKILQPSFSPATSVLIKLGIAVKVHCDLLIFMTH
KNPIILHVYFFPIDSVFEEKIKTEEKSSHQINLSRPETPLQMKKQHSLEVPGASVQPKAI
KLRGDIKPNFFEVIHPVVDDINMTLSRVDDQKSVWTATICKVLFGFMLVNSESNLFQTGQ
KHKAQQVAVNFDKVQFFNRKWCDLIKIIENVNTIADKLLQKQIIHEELYSEIIHPTSTSE
ASMRKICSTVRKGSDTVKETFISILLEEHPNLLNHLPLPES
NT seq
3726 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaatctgttggttggagcgctgcagacttagcaactgtacatgctgctgtgaaa
tctgtattacatcgactacaacaactagcaggttggagagctgcagactcagcaactgaa
catgctgctgtgaaatctgtattacatcgactacaacaactagcagggtacttaaatttg
aagtatcatacattctcggattgtttaaagttttggaaaaattatgaacttctatctgat
gaacatgtggaactagctgcccgttatactgaaccagtaatcattcagaggagcaaagag
cagactgagaaatactgtcaagaatatgtgaggtctgcacgcttctggaacaggacatca
tctcaattgttatcaaatgacaagaatcacaacatcagaatagaacagctgttcagtcct
gactgtgatggaatcacaccaaaaactgtgattcttgttggtgattctggaagagganaa
tccttcatgttagagaagatcatgttggactgggcatctggagaactttactctgaaaac
tttgatgtagtttttcttctgaagtttgatgagctgaagtgtatttctgacgagattagc
ttgaatcagctcttgagctggagctgcagtttaacatcagatcagatctcacagatactg
gagttaacaccagagaaagtcctttacctcattgatggattggatgagttctcattcgat
ccacacattcaaatttcatcgcccactgatccatcccagaaagccccaattatggacatc
cttaactgcctgctgagggatctcttgttacttgagtcatctgtgattgtcaccattaga
tatacagctgctgctgaattaagcaatctgtttaaaagacctcagcgtttcaccgagacc
atgggtttctctgagagaggggtgcaggagtacttccagaagttttttcaggatgagcag
ctcttcaggaaaacatatgagagtgtgaagataaatgaaagcctcctgactgcctgctct
gtgcctttgctgtgttggatggtctgtttttgtctgaagaaacacttcacagatgatgat
catgtgatgagagaactaaagacaaccacctccatatatgtgcactttgtgtccactcta
ctggagcatcatgaccagagtcagtctgtcctcaggagtctgggtcagctggcagaggaa
ggggtcaagaagcaacaagtcctttttgatgaaaagagtgtggtcaagacttgcttaaat
cctgctactactctattcttgtataaacatgaatcatttttcaagtttatacatttccgt
tttcaggaattcttcactgctctttattatgtcttgctggaagaaaaagagacctggtgg
aaagtcagtgagctgtttaacttgatggaatcagaggctgtaatttacaggtcatctcca
atttttagaggtagactatcaaatcccatcccttcagtcataatgtttctctgtggtctc
tttaatgagaagataagcagctcactctttgaaaagatgaagtcaactgttcctcacacc
ataaaactgaagaaaaagctgatggaaattattcctgcaatgacacggcagtatggatta
gagttatttgctctccactgtctgtatgagttccaggatgagagatttgtcagtgaagct
ctgaaaacacacaggttcatggatctgtctaacatttctctgaggagcacagactgttgg
gtgctgctgtactgtcttcagtgctgtccacacatcagagacctgaacctcatgtactgt
gatttaacagccgagaaactcaagattcttcagccagtgctctgtatgtgtcagactctg
aggttgtcagtagagcatctgtcagaagttggagatttgatccagatacttggtgaagca
aaaatcttgagaaggctgaaagttcaggaggatgaatacagtgctaagagtcccagatgg
tcacttgacctgtcagtcactcatggagatgtcttgttgtctttgagctcctcagagaag
aatccttcatttccagcagtcttaaacatcagtcttacatgtccacaatcagagatatcc
agcactgactggacactcttcttacagaaactcagcaagacaggaaaagtagcagaagtc
ttttcagttcttgatgagcatgtcagtttgctgctgtcttcatttcactctgtgggtttg
aagatgttggatctaaagctggtcgttctaaataagagctgggcttctgggatcatttcc
ctcgtccagacctgcaccagtctacaggagctcagtgtcagtgtcactggattgcttttg
gaggagggcctcatgttactgaagaaatcactgacggatccacactgctctgtgatcatt
gaagggaggaagtgcagcaaacccacagtagataactggagttacagctgtaatgagaaa
gtggagattcacttcaaaccaaaagttttgaaaaagctggaagagctgaccatctctaag
cctagcccgcctggactgaatcttcagccgctcccagtgtgtcagtcttgtgttcacatt
gttgactctgatcagtgggttcaggtggagccgtcagtctgtacagatgaaggagggtca
gagttcaggatcagcaccccggcgggtcgattcgagtgcagcaggaccagaatgcgttgg
gtctgtgctggtgacgtcactctccagtaccgtgcagtggatggacgtttcctcagagaa
gagctggagaggcttcagtgtgagcgaattggtcctgtgattgatgtgacagtgatctca
gggaaactggaggaggctcatctgcctcattacgcctgtttagcagagtcagacccctct
ctcacagaggctgtgaaggtcgtcagtgttaaagatgagggaatgtccttggaatcagtg
gagttgactcgttttcatgccaaaatactccaaccatctttttctcctgcaacatcagtg
cttatcaaactagggatagcagtgaaagttcactgtgatctactgatcttcatgacacac
aagaaccccatcattctccatgtgtattttttcccgatagactcagtttttgaagaaaaa
attaaaacagaggaaaaatcgagtcatcaaatcaatctttcaagacctgaaaccccactg
cagatgaagaaacaacacagtcttgaggttcctggtgcttctgtccaacccaaagcaatc
aagctaagaggagacatcaagccaaacttttttgaggtcatacatcctgtggttgatgac
atcaatatgactcttagccgagtggatgatcagaaatcagtttggactgcaacaatttgc
aaagttttatttggattcatgttggttaattctgaatctaatttgtttcaaactggacaa
aagcataaggcacaacaagtggctgtcaactttgataaagttcagttttttaatagaaaa
tggtgtgatcttattaaaatcattgagaatgtgaacaccattgcagacaaactgcttcag
aagcaaatcattcatgaagaattatattctgaaatcatacatccaacttcaaccagtgaa
gccagcatgaggaagatctgcagcacagtgcgaaaaggtagtgacactgtgaaagaaacg
ttcatctccattcttctggaagaacatcccaaccttttaaatcatctgcctttacctgaa
tcttaa
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