Onychostoma macrolepis: 131528640
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Entry
131528640 CDS
T09350
Name
(RefSeq) LOW QUALITY PROTEIN: NACHT, LRR and PYD domains-containing protein 1 homolog
KO
K12798
NACHT, LRR and PYD domains-containing protein 1
Organism
omc
Onychostoma macrolepis
Pathway
omc04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
131528640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omc04131
]
131528640
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
omc04054
]
131528640
Membrane trafficking [BR:
omc04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
131528640
Pattern recognition receptors [BR:
omc04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
131528640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
CARD
FIIND
UPA-FIIND
NLRC4_HD2
NOD2_WH
AAA
nSTAND3
AAA_16
AAA_25
Motif
Other DBs
NCBI-GeneID:
131528640
NCBI-ProteinID:
XP_058613914
LinkDB
All DBs
Position
02:28875577..28893797
Genome browser
AA seq
1655 aa
AA seq
DB search
MSSFEAQFVDINCAALIQKVTSVKAIADELTKKDVIHDETYSEIRAEQTNQGKMRKLFEA
LHAGGDKAKNDFYYALRNHEPFLVRDLGGYSWKHKLPDPDSKVATRHKSWSDMILKYKAS
VTDKCKFVIEFNLPSDECVELAGRYTEPVIIQNSKEQAEKYYHEWVRSVHPFGLKPSSQL
LSNDKNHSIRIDQLFSPDSDGNTPXTVILSGDPGRGKSFMLQKIMLDWASGGLYSENFDV
IYLLKCDEVKCLSQEMSLNQLLSWSCSLTSHQISQTLELTPEKVLILIDGIDEFSFDPCI
QISSPSNPSQQALPMDILRSLLDGQILPESFLLVTTRSDADTVMNLLKGPQRFTEIMGFS
ERGVQEYFQKFFQDEKLFRKTYESVTINESLLTACSVPLLCWMVCFCLKKHFTDYDHVMR
ELKTTTSIYVHFVSTLLEHHDQSQSVLTMLRSLGQLAEEGMKKQQVFFDEKSVAKNGLDP
ATSVFLYKGSLKIKDKQEPVFRFMHFSFQEFFTALYYVLLDEEMSWWKICELVDRVEMRD
AIYRPSPERSNPFLSVMMFLCGLLNEEVSSSLFEKIKETVPYNMILKKTRQGSLLRMAIY
HECEQLFCDEVKCLSQEMSLNQLLSWSCSLTSHQISQTLELTPEKVLILIDGIDEFSFDP
RIQISSPSNPSQQALPMDILRSLLDGQILAESFLLVTTRSDACTVMNLLKGPQRFTEIMG
FSERGVQEYFQKFFQDEKLFRKTYESVKINESLLTACSVPLLCWMVCFCLKKHFTDYDHV
MRELKTTTSIYVHFVSTLLEHHDQSQSVLTMLRSLGQLAEEGMKKQQVFFDEKSVAKTGL
KIKDKQEPVFRFMHFSFQEFFTALYYVLLDEEMCWWKINNLLHRVEMGNEIYRPSPERSN
PFLSVMMFLCGLLNEEVSSSLFEKIKETVPYNMKLKKTLQGILLRMATYHECEQLFVLYC
LYELQDERFVRETLQTRRFMNLYNVSLRSTDCWVLLYCLQCCPHIRDLNLMYCDLTAEKL
KILQPALCMCETMRLSVEHLLEAGDLIRSLGESEILRWLRVQEDEYSAESPRWSLDLFVG
RGDVSLSLSSSEKNPLFPAVLNMSLKCPQSEISSTDWTLFLQKLSKTGKLADDSSALDEH
VSLLLSSFHSVGLKVLHLKLVSLNKSWASGIISLAQTCTSLQQLIVSVTGLILEEGLMLL
KNSLTDPHCSVIIEGRKCSKLTDQCKEQDWSHSCNEKVEIHFKPKGLKKIKGLNISEPSG
LNLQPLPVCQSCVHIVDSDQWVQVEPSVCTDEGGSEFRISTPAGRFECSRTRMRWVCAGD
VTLQYRAVDGRFLREELERLKYERIGPVIDVTVISGKLEEAHLPHYACLAESDPSLREAV
KLLSTRDEGIYFQSVELTRYHAKIVQPSFSPATPVLIKLGIAVKVHCDLLIFMTHKNPII
LHVYFLPIDSVFEEKIKTKKKSCHQIILSRPETPLQMKKQHSLEVPGASVQPKAIKLRGD
IEPNFFQVKHPVVDDINMSLSRVDDQKSVWTATIWKKLINMHPNRTETLFQSGQNQNTPR
LTVNFDKVQFFDRNWCALIKSVENVNNIADKLLQKQIIHEELYSEITHPNSTSEASMRKI
CSIVRKGSDTVKEMFISILLEEDPDLLNHLPLPES
NT seq
4968 nt
NT seq
+upstream
nt +downstream
nt
atgagcagctttgaggcccagtttgtggatataaactgcgcagcgcttattcagaaggtt
acctcagtgaaggcaatagcagatgaactaacaaaaaaggacgtgatacatgatgaaaca
tattcagagatcagagcagaacaaaccaaccagggcaaaatgagaaagctatttgaagca
ctacatgctggaggagacaaagcgaaaaatgacttttattatgcgctgagaaatcatgag
ccattcctcgtcagagacctgggtggttacagttggaaacacaagcttcctgatcctgat
tccaaagtagcaaccagacataaaagttggagtgacatgattcttaagtataaagcatca
gtcactgataaatgtaagtttgtgatcgagtttaatcttccatctgatgaatgtgtggag
ctggcaggccgttatactgaaccagtgatcattcagaatagcaaagagcaagctgagaaa
tactatcatgaatgggtgaggtccgtacacccttttggactaaagccatcatctcaactg
ttatcaaatgacaagaatcacagcatcagaatagaccagctgttcagtcccgacagtgat
ggaaacacaccanaaactgtgattctcagtggagatccaggcagagggaaatccttcatg
ttacagaagatcatgttggactgggcttctggaggactttactctgaaaactttgatgta
atttatcttttgaagtgtgatgaggtgaagtgtctttcccaggagatgagcttgaatcag
ctcttgagctggagctgcagcttaacatcacatcagatctcacagacactggagttaaca
ccagagaaagtcctcatcctcattgatggaattgatgagttctcatttgatccatgcatt
caaatatcatcaccctctaatccatcgcagcaagctctaccaatggacattcttaggagt
ctgctggatggacagatcctgcctgagtctttcctgctggttaccaccagatcagatgct
gatacagtgatgaatctcctcaagggtcctcagcgtttcactgagattatgggcttctct
gagagaggggtgcaggagtacttccagaagttctttcaggatgagaaactcttcaggaaa
acatatgagagtgtgacgataaatgaaagcctcctgactgcctgctctgtgcctttgctg
tgttggatggtctgtttttgtctgaagaaacacttcacagattatgatcatgtgatgaga
gaactaaagacaaccacctccatatatgtgcactttgtgtccactctactggagcatcat
gaccagagtcagtctgtcctcaccatgctgaggagtctgggtcagctggcagaggaaggg
atgaagaagcagcaggtcttttttgatgaaaagagtgtagccaagaatggtttagatcct
gctactagtgtgttcttgtataaaggtagtttaaaaataaaagacaaacaagagccagta
tttaggtttatgcatttcagctttcaggagttcttcactgctctttattatgttttactg
gatgaggaaatgtcctggtggaaaatctgtgagctggttgacagggtggaaatgagggat
gcaatctacaggccatcaccagaaagatcaaatccctttctttcagtcatgatgtttctc
tgtggtctcttaaatgaggaggtgagcagctcactctttgaaaagattaaggaaactgtt
ccttacaacatgatactgaagaaaacacggcaaggaagtcttctaagaatggcaatatac
catgaatgtgaacagttattttgtgatgaggtgaagtgtctttcccaggagatgagcttg
aatcagctcttgagctggagctgcagcttaacatcacatcagatctcacagacactggag
ttaacgccagagaaagtcctcatcctcattgatggaattgatgagttctcatttgatcca
cgcattcaaatatcatcaccctctaatccatcgcagcaagctctaccaatggacattctt
aggagtctgctggatggacagatcctggctgagtctttcctgctggttaccaccagatca
gatgcttgtacagtgatgaatctcctcaagggtcctcagcgtttcactgagattatgggc
ttctctgagagaggggtgcaggagtacttccagaagttctttcaggatgagaaactcttc
aggaaaacatatgagagtgtgaagataaatgaaagcctcctgactgcctgctctgtgcct
ttgctgtgttggatggtctgtttttgtctgaagaaacacttcacagattatgatcatgtg
atgagagaactaaagacaaccacctccatatatgtgcactttgtgtccactctactggag
catcatgaccagagtcagtctgtcctcaccatgctgaggagtctgggtcagctggcagag
gaagggatgaagaagcagcaggtcttttttgatgaaaagagtgtagccaagactggctta
aaaataaaagacaaacaagagccagtatttaggtttatgcatttcagctttcaggagttc
ttcactgctctttattatgttttactggatgaggaaatgtgctggtggaaaatcaataat
ctgcttcacagggtggaaatgggtaatgaaatctacaggccatcaccagaaagatcaaat
ccctttctttcagtcatgatgtttctctgtggtctcttaaatgaggaggtgagcagctca
ctctttgaaaagattaaggaaactgttccttacaacatgaaactgaagaaaacactgcaa
ggaattcttctaagaatggcaacataccatgaatgtgaacagttatttgttctctactgt
ctgtatgagctccaagatgagagatttgtcagggaaactctgcaaacacgcaggttcatg
aatctgtataacgtttctctgaggagcacagactgttgggtgctgctgtactgtcttcag
tgctgtccacacatcagagacctgaacctcatgtactgtgatttaacagccgagaaactc
aagattcttcagccagcgctctgtatgtgtgagactatgaggttgtcagtggagcacctg
ttagaagctggagatttgatccgaagtcttggtgaatcagaaatcttgagatggctgaga
gttcaagaggatgaatacagtgctgagagtcccagatggtcacttgacctgtttgtcggt
cgtggagatgtctctttgtctttgagctcctcagagaagaatccattatttccagcagtc
ttaaacatgagtcttaaatgtccacaatcagagatatccagcactgactggacactcttc
ttacagaaactcagcaagacaggaaaattagcagatgactcttcagctcttgatgagcat
gtcagtttgctgctgtcttcatttcattctgtgggtttgaaggtgctgcatctgaagctg
gtcagtctgaataagagctgggcttctgggatcatttcgctcgcccagacctgcaccagt
ctacagcagctcattgtcagtgtcactggattgattttggaggagggtctcatgttactg
aagaactcgctgacggatccacactgctctgtgatcattgaagggaggaagtgcagtaaa
ctcactgatcagtgcaaagaacaggactggagtcacagctgtaatgagaaagtggagatt
cacttcaaaccaaagggtttgaaaaagataaaagggctgaacatctctgaaccgtctgga
ctgaatcttcagccgctcccagtgtgtcagtcttgtgttcacattgttgactctgatcag
tgggttcaggtggagccatcagtctgtacagatgaaggagggtcagagttcaggatcagc
accccggcgggtcgattcgagtgcagcaggaccagaatgcgatgggtctgtgctggtgac
gtcactctccagtaccgtgcagtggatggacgtttcctcagagaagagctggagagactt
aagtatgagcgaattggtcctgtgattgatgtgacagtgatctcagggaaactggaggag
gctcatctgcctcattacgcctgtttagcagagtcagacccctctctcagagaggctgtg
aagctcctcagcacaagagatgaaggaatatattttcaatctgtagagttgacccgttat
cacgctaaaatagtccaaccatccttttctcctgcaacaccagtgcttatcaaactaggg
atagcagtaaaagttcactgtgatctactgatcttcatgacacacaagaaccccatcatt
ctccatgtgtattttttaccaatagattctgtttttgaagaaaaaattaaaacaaagaaa
aaatcgtgtcatcaaatcattctttcaagacctgaaaccccactgcagatgaagaaacaa
cacagtcttgaggttcctggcgcttctgtccaacccaaagcaatcaaattaagaggagac
attgagccaaacttctttcaggtcaaacatcctgtggtcgatgacatcaatatgtctctc
agccgagtggatgatcagaaatcagtttggactgcaacgatttggaaaaaattaatcaac
atgcatccaaacaggactgagactttgtttcaatctggacaaaaccaaaatacaccacga
ttgactgtcaactttgataaagttcagttttttgatagaaactggtgtgctcttattaaa
agtgttgagaatgtgaataacatcgcagacaaactgctgcagaagcaaatcattcatgaa
gaattatattctgaaatcacacatcctaattcaaccagtgaagccagcatgaggaagatc
tgcagcatagtgcgtaaaggtagtgacactgtgaaagaaatgttcatctccattcttctg
gaagaagatcccgaccttttaaatcatctgcctttacctgaatcttaa
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integrated database retrieval system
