Onychostoma macrolepis: 131533874
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Entry
131533874 CDS
T09350
Symbol
tdg.2
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
omc
Onychostoma macrolepis
Pathway
omc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
131533874 (tdg.2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
omc03400
]
131533874 (tdg.2)
Enzymes [BR:
omc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
131533874 (tdg.2)
DNA repair and recombination proteins [BR:
omc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
131533874 (tdg.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
131533874
NCBI-ProteinID:
XP_058622293
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All DBs
Position
25:12434443..12440466
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AA seq
404 aa
AA seq
DB search
MAVRPPIKMEERQYSSLTAPMDYLQYWYQTNPQQYQAEQVPQYHQMVNATQYAERPVEDK
IMTDLSVHQDLYLDQPQQPHELSPQPPALPTTPAKGKKRGRPPKGEGKEKTEAEEAAKKA
KRTLNRFNGMSVEEVMARKLPDVITHNLDMLIIGINPGLLSAFKGRHYPNPGNHFWKCLF
LSGLTDEQLNHMHDQMLPERYGIGFTNMVERTTPGSKDLSNKEIREGGHQLLEKLQKYRP
LIAVFNGKCIYETFCKEIFGVKAKNLEFGLQPYKVPETETVCYLMPSSSPRCAQFPRAQD
KVHFFIKLKELRDQMKGVGRTQEIQETNYTFDLTLAKEDAKRLTIKEEQQDPGYEETCAH
GSQQHPQQAFEVQPSTDTDQVSDNWWTMQPFADQIPDIRCSNSN
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggcagtaagaccaccaattaagatggaagaaaggcagtattcatctctgacggcccct
atggattatcttcagtactggtatcaaaccaatcctcagcagtaccaggcagaacaggtg
ccgcagtaccaccagatggttaatgccacccaatacgccgagagacctgtggaggacaaa
atcatgactgatctttcagtgcatcaagatctatacctggatcaacctcagcagcctcat
gaactctctccccaaccaccagcccttccaacgactccagcaaaaggaaagaaaagggga
aggcctccaaaaggtgaaggaaaggagaagacggaagctgaagaggctgccaagaaagca
aagaggacgttaaatcggttcaacgggatgtcagtagaggaagtcatggctagaaagctg
ccagacgtcatcacacataatcttgacatgctgattatcggcatcaatcctggacttttg
tcagccttcaagggaaggcattatccaaatcctgggaaccatttttggaagtgcttattt
ctgtccggtctgaccgatgaacagctcaaccacatgcatgatcagatgcttcctgaacgg
tatggcattggtttcaccaatatggtggagaggactacacctgggagtaaagacctatca
aacaaagagatccgtgaaggtggccaccagcttttggaaaagctccagaagtacagacct
ttaatcgctgtgttcaatggaaaatgtatttacgaaacattttgcaaggagatttttgga
gtaaaggctaagaacttagagttcggattgcagccttacaaagtgccagaaacggagacg
gtttgctatctgatgccatcatcaagcccacgctgtgcccagtttcctcgtgctcaggac
aaagtgcacttcttcatcaagttaaaggagctcagggatcaaatgaaaggagtggggagg
actcaagagatccaagagacaaactacacatttgatctgactctggccaaagaggatgcc
aaaagactcacaatcaaagaagagcagcaggaccctggatatgaagagacctgtgcccat
ggatcacagcagcacccacagcaagcatttgaggtccagccttctacagacacagaccag
gtatcagacaactggtggacaatgcagccgtttgcagaccagattccagacatcagatgt
agcaacagcaactga
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