KEGG   Onychostoma macrolepis: 131536183
Entry
131536183         CDS       T09350                                 
Symbol
pdgfbb
Name
(RefSeq) uncharacterized protein pdgfbb
  KO
K04359  platelet-derived growth factor subunit A
Organism
omc  Onychostoma macrolepis
Pathway
omc04010  MAPK signaling pathway
omc04020  Calcium signaling pathway
omc04510  Focal adhesion
omc04518  Integrin signaling
omc04540  Gap junction
omc04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:omc00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    131536183 (pdgfbb)
   04020 Calcium signaling pathway
    131536183 (pdgfbb)
  09133 Signaling molecules and interaction
   04518 Integrin signaling
    131536183 (pdgfbb)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    131536183 (pdgfbb)
   04540 Gap junction
    131536183 (pdgfbb)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    131536183 (pdgfbb)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:omc04052]
    131536183 (pdgfbb)
   00536 Glycosaminoglycan binding proteins [BR:omc00536]
    131536183 (pdgfbb)
Cytokines and neuropeptides [BR:omc04052]
 Cytokines
  Growth factors (RTK binding)
   131536183 (pdgfbb)
Glycosaminoglycan binding proteins [BR:omc00536]
 Heparan sulfate / Heparin
  Growth factors/receptors
   131536183 (pdgfbb)
SSDB
Motif
Pfam: PDGF PDGF_N HCV_NS5a_C
Other DBs
NCBI-GeneID: 131536183
NCBI-ProteinID: XP_058624913
LinkDB
Position
03:43809959..43839378
AA seq 489 aa
MRSRIPLLLAVLAAACLRFGGAEADPLPAAVVELVKGGSVSSIQDLQFLLFSESIEVEPD
SHHDNDTSNRLPRSLLDAQPAQQAICKVRTEVIEVTRSMLDRSNANFLLWPPCVEVQRCS
GCCNTKSLQCVPILTHTRYLQVMKIQYVNKRPLYNKAVVSVLDHVECRCQPAPRPAQRRK
SSGHKQEGRERSGKPRPKDELHRRDELKHNQRISLEDLLSHSWLPKERFSEPGFGRDGWG
LNETQYGGGKGHHRHPGDGRRHGKTNDTATTAPLPNHTEQEETDLSLRNITQFESQSNAN
QSITNQTSDFTITTLELTNQTFMHQSNLTQENEQLQTTNQTDQLTSNATGTANQNRGDVF
LSVEESGQKVRGETMDVEAKEEEREQRQMDKKAKEEEMDELLLMHKILDEEKHKHHLKVQ
HMNIQPDEKLQQLHHKQHTYTTTQRTGTTSPPVQHLPPHKPPRPPPHPPKRRRKQRNRIS
KSAMRALLM
NT seq 1470 nt   +upstreamnt  +downstreamnt
atgagatcgcggatcccgcttcttctcgcggtacttgcggcggcgtgtctgcggtttggc
ggtgcggaggctgatcctctcccggccgctgtggttgagttggtgaagggtggatctgtg
tcttctattcaggacctgcagtttttgctgttctctgaatctatagaggttgagccggac
agtcaccatgacaatgacaccagcaaccgtctgccacgcagtcttctggacgctcagccg
gctcagcaagccatctgtaaggtcaggaccgaggtcatcgaggtcacacgctccatgttg
gaccgtagcaatgcaaatttcctgttgtggcctccatgtgtggaagtgcagaggtgctcg
ggctgctgtaacaccaagagcctgcagtgtgtgcctatacttacacacacacgataccta
caggtgatgaagatacagtacgtgaacaagcggccgctttacaataaggctgtcgtctcc
gttctcgaccatgtggagtgccgctgtcagccggctcctcggcccgctcagcgccggaaa
tcatccggccacaaacaagagggacgggaacgttctgggaaacctcgacccaaagatgag
ctccatcgcagggatgaactcaaacacaaccagaggataagcctggaagacctgcttagc
cacagctggctgcccaaagagaggttctctgagccaggattcggccgggacggctggggt
ctgaacgagacgcagtatggagggggcaaaggtcatcaccgtcaccctggggatggaagg
agacacggcaaaacgaatgacacagcaacgacagctccactgccgaatcacaccgagcag
gaagaaactgatttgtcattgcgtaacattacgcaattcgaatcgcagagtaatgctaac
caaagtataaccaatcagacatctgattttaccataactacattggaattgaccaatcag
acttttatgcaccagtcaaatctaacgcaagaaaacgaacaattgcaaacaacaaatcag
acagaccaactcacctctaacgccacaggaacagccaatcagaataggggagatgtgttt
ctgtctgtagaggagagcggtcagaaggtgagaggtgagactatggacgtagaggcgaag
gaggaggagcgagagcagagacaaatggacaaaaaggccaaggaggaggaaatggacgag
ctgctgctaatgcacaaaatcctagatgaagaaaaacacaaacatcacctcaaagtgcaa
cacatgaatatacagccagatgagaaactacagcagctccatcacaaacaacacacttat
acaaccacacaacggacaggaactacatctcctcctgtgcaacatctccctccacacaaa
ccccccagaccacctcctcaccccccgaaaaggaggagaaaacagcggaatcgcatcagc
aaatctgccatgagagccctgctcatgtaa

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