Onychostoma macrolepis: 131536858
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Entry
131536858 CDS
T09350
Symbol
eftud2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
omc
Onychostoma macrolepis
Pathway
omc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131536858 (eftud2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
omc03041
]
131536858 (eftud2)
Spliceosome [BR:
omc03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
131536858 (eftud2)
Complex C
U5 SnRNP specific factors
131536858 (eftud2)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
131536858
NCBI-ProteinID:
XP_058625994
LinkDB
All DBs
Position
03:40376187..40388931
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AA seq
971 aa
AA seq
DB search
METDLYDEFGNYIGPELDSDEDEVDADDREADEADEDDDDEDQAEVDEEDVGSMEVVLHE
DKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKMKRFTLMEQELPATVYDMEFLAD
LMDSSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRDDSDLRYTDILFTEQERGVGI
KSAPVTMVLPDSRGKSYLFNIMDTPGHVNFSDEVTSAVRLSDGIVLFIDAAEGVMLNTER
LIKHAVQEKLAITICINKVDRLIVELKLPPTDAYYKLRHIVDEVNGLLSTYSTDESLIVS
PLLGNVCFASSQYSICFTLGSFAKIYSDTYGDIHYMEFAKRLWGDIYFNPKTRKFTKKAP
NSNSQRSFVEFVLEPLYKILSQVVGDVDTSLPRVLDELGIHLTKEELKLNIKPLLRLVCN
RFFGEFTGFVDMCVHHIPSPQGGARAKIEHSYTGGLDSDLGETMSECDPDGPLMCHTTKM
YSTDDGVQFHAFGRVLSGTLQAGQPVKVLGENYSLEDEEDSQICTIGRLWISVARYQIEV
NRVPAGNWVLIEGCDQPIVKTATITEPRGNEEAQIFRPLKFNTASVIKIAVEPVNPSELP
KMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVVT
FCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQTK
YDWDLLAARSIWAFGPDTTGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLCD
EPIRNVKFKILDAVIAQEPLHRGGGQVIPTARRVVYSAFLMATPRLMEPYYFVEVQAPAD
CVSAVYTVLARRRGHVTQDAPIPGSPLYAIKAFIPAIDSFGFETDLRTHTQGQAFALSVF
HHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLEL
AKQDVVLNYPM
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atggagacggatctttatgatgagtttggaaactatattggaccagagctggactctgat
gaagatgaagtagatgcagacgaccgagaggctgatgaggcggacgaggatgatgatgat
gaagaccaggctgaggttgatgaggaggatgttggtagtatggaggtggtcctgcatgag
gataaaaagtattatcccacagctgaggaagtttatggtcctgaggtggagactatcgta
caagaagaagatacacaaccattgacagagcccatcataaaacctgtgaagatgaagcgg
tttactttgatggagcaagagcttcccgccaccgtctatgacatggagttccttgctgat
ttgatggacagctcagaactgatcagaaatgtcaccttgtgtggacacttacaccacggc
aagacttgctttgtggactgcctcattgaacagacacatcctgaaatccgcaagagagat
gacagtgacttacgatacaccgatatcctcttcacagagcaagagaggggagttggcatc
aagagtgcacctgtaaccatggttctgcctgactcccggggcaaatcttacctttttaac
atcatggacacgccaggtcatgtgaatttctctgatgaggtgacatcagcagtcagactg
tctgacggcattgtgctttttatcgatgctgctgagggggttatgctaaacactgagcga
ctgatcaagcatgcagtgcaggagaagctggccattactatctgtattaataaagtggat
cgtctgatcgtggagctcaagctgccccctactgatgcctactacaaactgcgccacatc
gtggatgaggtcaacggcttgctgagcacatactccaccgatgagtcgctgattgtgtct
cccctgttggggaacgtgtgttttgcttcctcacaatacagcatctgcttcactcttggc
tcctttgctaaaatctattcagacacctacggagacatccactacatggagtttgctaaa
agactgtggggagacatttacttcaaccctaaaacgaggaaattcacaaagaaagccccc
aacagcaactctcagcgcagctttgttgagtttgtcctagagccgttgtacaagattctt
tcacaggtggtgggggatgtggatacgtctctgcctcgtgtgttggatgagctcggcatt
catctgactaaagaggaattaaagctcaacatcaaacctctgctgcgccttgtctgtaac
cgcttttttggagagtttacaggctttgtggacatgtgtgtgcatcacataccatctcct
caggggggtgccagagccaagatagagcacagctacacaggtggactggactcagacctc
ggagagacaatgtctgagtgtgaccctgatggtccactgatgtgccacaccaccaagatg
tacagcacagatgacggcgtgcagttccatgcgtttggtcgagtcctgagcggaaccctg
caggcgggtcagccggtgaaggttctgggagagaactacagcctggaggatgaggaggac
tcgcagatctgcactatcggacgcctgtggatttctgtcgcaaggtatcagattgaagtg
aatcgtgtccctgctggtaactgggtgttgatcgaagggtgcgaccagcctattgttaaa
acagccacaatcacagagccccgtggaaatgaagaggctcagatcttcaggccattgaag
tttaacaccgcgtcagtgataaaaattgctgtggagccggtcaatccctcagaactgccc
aagatgttggatggactcagaaaagtcaacaaaagttatccgtcacttacaacaaaggtg
gaagagtcaggtgaacatgtgattcttggtacaggtgagctgtacctggactgtgtaatg
cacgacctgcggaagatgtactctgagattgatatcaaggtggctgatccagtagtgacc
ttctgtgagactgtggtggagacgtcctccctcaagtgttttgccgaaacgcccaataaa
aagaataagattaccatgattgccgagccgttggagaagggtctagctgaagacattgag
aatgaggtggtgcagatcacgtggaacagaaaaaagttgggagagtttttccagacgaag
tatgactgggatttgctagcagctcgttccatttgggcttttggacctgacacaacagga
cccaacattttagtagacgacactttgccctctgaggtagataaagctcttctcggctca
gtgaaggacagcattgtacagggcttccagtggggcacacgcgagggtcctttgtgtgat
gaaccaatccgcaacgtaaagtttaagatcctggacgcagtgatcgcacaggaaccgctg
cataggggaggaggacaggtcatccctacagctcgcagagtcgtttactctgccttcctg
atggccacgcccaggctgatggagccttattactttgtggaggttcaggcccctgctgac
tgcgtttctgctgtgtacacggtgctggcacgcaggagaggtcatgtgacgcaggatgcg
ccaatccctggctctcctctctacgccatcaaggctttcattcctgctattgactcgttt
ggctttgaaacggatctccgcacacacacgcagggccaggccttcgcgctcagtgtgttc
caccactggcagattgttcccggtgatcctctggataagagcattgtgattcgtcctcta
gagcctcagccggcccctcatctggccagagagtttatgatcaaaacccgcaggcgcaaa
ggtttgagcgaggatgtcagtatcagcaagttcttcgatgaccctatgttgttggagctg
gccaaacaagatgtggtgctcaattacccaatgtga
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