KEGG   Onychostoma macrolepis: 131537527
Entry
131537527         CDS       T09350                                 
Symbol
rbx1
Name
(RefSeq) E3 ubiquitin-protein ligase RBX1
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
omc  Onychostoma macrolepis
Pathway
omc03420  Nucleotide excision repair
omc04110  Cell cycle
omc04114  Oocyte meiosis
omc04120  Ubiquitin mediated proteolysis
omc04141  Protein processing in endoplasmic reticulum
omc04310  Wnt signaling pathway
omc04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:omc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    131537527 (rbx1)
   04120 Ubiquitin mediated proteolysis
    131537527 (rbx1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    131537527 (rbx1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    131537527 (rbx1)
   04350 TGF-beta signaling pathway
    131537527 (rbx1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    131537527 (rbx1)
   04114 Oocyte meiosis
    131537527 (rbx1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:omc04121]
    131537527 (rbx1)
   03400 DNA repair and recombination proteins [BR:omc03400]
    131537527 (rbx1)
Enzymes [BR:omc01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     131537527 (rbx1)
Ubiquitin system [BR:omc04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   131537527 (rbx1)
  Multi subunit type E3
   SCF complex
    Ring finger protein
     131537527 (rbx1)
   Cul2 complex
     131537527 (rbx1)
   Cul3 complex
     131537527 (rbx1)
   Cul4 complex
     131537527 (rbx1)
   Cul7 complex
     131537527 (rbx1)
   Cul8 complex
     131537527 (rbx1)
   Cul9 complex
     131537527 (rbx1)
DNA repair and recombination proteins [BR:omc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      131537527 (rbx1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      131537527 (rbx1)
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 DUF8003 PHD_NSD
Other DBs
NCBI-GeneID: 131537527
NCBI-ProteinID: XP_058627030
LinkDB
Position
03:21810631..21812587
AA seq 108 aa
MAAAMDVDTPSGANSGASKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq 327 nt   +upstreamnt  +downstreamnt
atggcggccgcgatggatgtagacaccccgagtggagctaacagcggagccagtaaaaag
cgttttgaagtgaaaaagtggaatgccgtggctctgtgggcttgggacattgtggtggac
aactgtgccatttgcagaaatcacattatggacctctgtatagagtgtcaggccaatcag
gcgtcagctacgtcagaggagtgtacagtggcctggggagtctgtaatcatgcatttcat
ttccactgcatctctcgctggctgaagaccagacaggtgtgtcctctggacaacagagag
tgggagttccagaagtacggtcattag

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