Onychostoma macrolepis: 131538879
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Entry
131538879 CDS
T09350
Symbol
irf5
Name
(RefSeq) interferon regulatory factor 5
KO
K09446
interferon regulatory factor 5
Organism
omc
Onychostoma macrolepis
Pathway
omc04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
131538879 (irf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omc03000
]
131538879 (irf5)
Transcription factors [BR:
omc03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
131538879 (irf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
131538879
NCBI-ProteinID:
XP_058628999
LinkDB
All DBs
Position
04:26521572..26529750
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AA seq
518 aa
AA seq
DB search
MSGQPRRIRLKPWLLAQINSGKYPGLHWLNQERRLFRIPWRHATRHMPTLEEENTIFKAW
ALETGKYQEGVDDPDPAKWKANLRCALNKSREFGLHYDGTKDTPVQPYKIYEVCDQSVNG
DAGDDEEEELQNFVKLSIDPSSYSYPPRVDVPFTSSIADGYNPTHHNPPMNLLGEVVHNN
PSGGASMTSHLSQPSTGPSAGSLAEFPSHRAIKVEQTPYPVHGGGLPNGLGMGTGVIPPP
GLQDVVTHSVGPPAIVDSPMQEVPAQVENQVHPCISELLSSPHMLPLTDLDIKFQYRGRA
AASLTVSNPQGCRLYYGNLAPTPEQVELFGPVTLQQVLFPGTAEVQNEKQRFYTDHLLDV
MDRGLILEIRGQDIYAIRLCQCKVFWSGPGVPEQGPPNPMEREMKIRVFSLNNFLQDLIL
YQKGETPTPPPFEIYFCFGEDWPDRKPKEKKLIIVQVVPVVARILTEMFSGELSWSTDSI
RLQISNPDLKDQTVEQFKELHRLLQSQNAHPTWAQNIH
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtcaaccacggaggatccgtctgaagccatggctgctggcccagattaacagt
gggaaatacccaggactacactggctcaatcaagaacgcagactgttccggatcccatgg
agacatgccacccgccatatgcctaccctggaggaggagaacactatatttaaggcttgg
gctctggaaacaggcaagtaccaagaaggagtagatgacccagatccagccaaatggaag
gccaacctccgctgtgccctaaacaaaagccgagagttcggactccactacgatggcact
aaggacacccccgtccagccttataagatctatgaggtgtgcgaccagtcagtcaatgga
gatgctggagatgatgaggaagaggagctacaaaactttgtcaaactctccattgaccct
tccagctactcctatcctcctagagtcgatgttccgttcacctcttctattgccgacggc
tataatcccacccaccataaccctccaatgaacctcttaggagaagttgtccacaataac
cccagtggaggtgcttctatgacctctcacctctcccagcccagcactggaccttcggct
ggttctttggctgaatttcccagtcacagggctatcaaagttgagcagacgccatatccc
gttcatggcgggggacttccgaatggtctgggaatggggactggagtcataccacctcct
ggtcttcaagatgtagtcactcattctgtaggccctccagccatagtggacagcccaatg
caagaggtgccagctcaagtggagaaccaggttcatccctgcatctcagagttgctgagc
agtccgcacatgttacccttgactgatctggatatcaagttccagtacaggggtcgggca
gctgcttctttgaccgtcagtaaccctcagggttgtagactttactacggtaacctggct
cccacaccagagcaagtagagctgttcggtccggtaacactgcagcaggtgctgtttcct
ggaaccgcagaggtccagaacgagaagcagaggttctacactgatcatctgctggatgtg
atggaccgagggctgattttggagatcaggggacaagatatctatgccatcaggctgtgc
cagtgtaaagtgttctggtctgggccaggtgtgcccgagcagggtccgcccaatccaatg
gaaagagagatgaagatcagggtcttcagtctgaacaacttccttcaggatctcattttg
tatcagaaaggagagacgcccactccaccaccctttgagatctacttctgcttcggtgag
gactggccagacaggaagcccaaggagaaaaagctcatcattgtccaggttgttccagtt
gttgcaagaatccttacagagatgttttcaggcgagctttcgtggtcgacagacagcatt
cggttgcagatctccaaccctgacctgaaggaccaaacagtggagcagttcaaagagctc
cacagacttttgcagagtcaaaatgcgcaccccacctgggctcaaaacatccactaa
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