Onychostoma macrolepis: 131538945
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Entry
131538945 CDS
T09350
Symbol
cacna1c
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1C isoform X1
KO
K04850
voltage-dependent calcium channel L type alpha-1C
Organism
omc
Onychostoma macrolepis
Pathway
omc04010
MAPK signaling pathway
omc04020
Calcium signaling pathway
omc04260
Cardiac muscle contraction
omc04261
Adrenergic signaling in cardiomyocytes
omc04270
Vascular smooth muscle contraction
omc04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
131538945 (cacna1c)
04020 Calcium signaling pathway
131538945 (cacna1c)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
131538945 (cacna1c)
09153 Circulatory system
04260 Cardiac muscle contraction
131538945 (cacna1c)
04261 Adrenergic signaling in cardiomyocytes
131538945 (cacna1c)
04270 Vascular smooth muscle contraction
131538945 (cacna1c)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
omc04040
]
131538945 (cacna1c)
Ion channels [BR:
omc04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
131538945 (cacna1c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
CAC1F_C
PKD_channel
EGF_PEAR1L
Motif
Other DBs
NCBI-GeneID:
131538945
NCBI-ProteinID:
XP_058629116
LinkDB
All DBs
Position
04:complement(21826979..21957147)
Genome browser
AA seq
2256 aa
AA seq
DB search
MLRGLFSRRRLKHERLEEEVEVRFKGKLVSERELGYTFVRPGGSNYSSPSLAPVPSLNED
ERVGGGGGVLGLAPEHIPTPGAPISWQAAIDAARQAKLMGTTGAPISTASSTQRKRQHYT
KPKKQASTASTRPPRALLCLTLKNPIRRACISIVEWKPFEIIILMTIFANCVALAVYIPF
PEDDSNATNSNLERVEYLFLIIFTVEAFLKVIAYGLLCHPNAYLRNGWNLLDFIIVVVGL
FSAILEQATKGDGGTSMGGKAAGFDVKALRAFRVLRPLRLVSGVPSLQVVLNSIIKAMVP
LLHIALLVLFVIIIYAIIGLELFMGKMHRTCFFFKDGHKGTVSEEKPAPCAPNSAHGRHC
TPANVTQCLMGWEGPNDGITNFDNFAFAMLTVFQCITMEGWTDVLYWMQDAMGYELPWVY
FVSLVIFGSFFVLNLVLGVLSGEFSKEREKAKARGDFQKLREKQQLEEDLKGYLDWITQA
EDIDPENDDEGLDDDKPRNRKTHRLQYIRGAVKKKAALLRKALSMPASENESVNTDNAPA
GDMEGETCCTRMANRISKSKFSRYSRRWNRLCRRTCRAAVKSNVFYWLVIFLVFLNTLTI
ASEHHQQPQWLTNVQEIANKVLLALFTGEMLLKMYSLGLQAYFVSLFNRFDSFVVCGGIL
ETILVEIKIMSPLGISVLRCVRLLRIFKITRYWNSLSNLVASLLNSVRSIASLLLLLFLF
IIIFSLLGMQLFGGKFNFDETRRSTFDNFPQSLLTVFQILTGEDWNSVMYDGIMAYGGPS
FPGMLVCIYFIILFICGNYILLNVFLAIAVDNLADAESLTSAQKEEEEEKERKKLARTAS
PEKRQDSEKPPLEDEKKEEKIELKSITSDGETPTATKINIDEYTGDENEEKNPYPVNDFP
AGEEDDEEPEMPVGPRPRPLSDIQLKEKAVPMPEAKAFFIFSPSNKFRVLCHKIVNHNIF
TNLILFFILLSSISLAAEDPVNNDSFRNQILGYADYVFTGIFTIEIILKMTAYGAFLHKG
SFCRNYFNILDLVVVSVSLISSGIQSSAINVVKILRVLRVLRPLRAINRAKGLKHVVQCV
FVAIRTIGNIVIVTTLLQFMFACIGVQLFKGKFFYCTDTSKQTQAECRGSYILYKDGNVG
KPEKAQRSWENSDFNFDDVLQGMMALFAVSTFEGWPGLLYRAIDSHAEDIGPIYNYRVII
SIFFIIYIIIIAFFMMNIFVGFVIVTFQEQGEQEYKNCELDKNQRQCVEYALKARPLRRY
IPKNPYQYKVWYVVNSTYFEYLMFTLILLNTICLAMQHHGQSQSFSKAMNILNMLFTGLF
TVEMILKLIAFKPRGYFSDPWNVFDFLIVIGSIIDVILSEINHYFVDAWNTFDALIVVGS
VVDIAITEVNPADPSSSPPSSVVRPMGLQNTEDNARISITFFRLFRVMRLVKLLSRGEGI
RTLLWTFIKSFQALPYVALLIVMLFFIYAVIGMQMFGKIALRDHSQINRNNNFQTFPQAV
LLLFRCATGEAWQEIMLACSPNRPCEKGTEVGHSSEDCGSHFAIIYFVSFYMLCAFLIIN
LFVAVIMDNFDYLTRDWSILGPHHLDEFKRIWAEYDPEAKGRIKHLDVVTLLRRIQPPLG
FGKLCPHRVACKRLVSMNMPLNSDGTVMFNATLFALVRTALRIKTEGNLEQANEELRAIV
KKIWKRTSMKLLDQVVPPAGDDEVTVGKFYATFLIQEYFRKFKKRKEQGLVAKIPPKTAL
SLQAGLRTLHDMGPEIRRAISGDLTVEEELERAMKETVCTASEDDIFRVKRSGGLFGNHV
NYYHQSDGHASFPQSFTTQRPLHISKSGSPGEAESPSHQKLVDSTFTPSSYSSSGSNANI
NNANNTAIGHRYPKPTVSTVDGQTGPPLTTVPLPRPTWCFPNKRSCFYDTFMRSDSSDSR
LPIIRREEASTDETYDETFLDERDQTMLSMDMLEFQDEESKQLAPMVEADVGEERRPWQS
PRRRAFLCPTALGRRSSFHLECLRKHNRPDVSQKTALPLHLVHHQALAVAGLSPLLRRSH
SPTLFTRLCSTPPASPSGRGGGGPCYQPVPSLRLEGSGSYEKLNSSMPSVNCSSWYSDSN
GNHSRSVQRTQRPVSLTVPPVTRRDSTSLSHGSAGSLVEAVLISEGLGRYAQDPTFIQVA
KQELADACDMTMEEMENAADNILNANAPPNANGNLLPFIQCRDTGSQESRCSHALGLSTA
TGSDELLGAELECSEGAGQRNSTLLEDEDMECVTSL
NT seq
6771 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgggggctgttcagtcggcgcaggctgaagcacgagcgactggaggaggaagtg
gaggtgcggtttaaagggaagctggtgtcggagagagagttgggctacacattcgtgcgg
ccaggaggctccaactattccagtccgtcgttggctccagtccccagtctgaatgaggac
gagcgtgtggggggtgggggtggggtgctgggtcttgcacctgaacacattcccacccct
ggcgcccccatcagctggcaggcagccatcgacgcggcacggcaggccaagctgatgggc
accaccggagccccgatctccactgcgagctccacacagcgcaaacgccagcactacacc
aaacccaagaaacaggccagcactgcctccacgcgcccaccccgagcccttctctgcctc
actcttaaaaaccccatccgcagggcatgcatcagtatcgtggaatggaaaccgtttgaa
atcatcattttgatgactatttttgcaaactgtgtggccttagctgtctacatccctttc
cccgaggacgattccaacgcaaccaactcaaacctggaacgggtggagtatctctttctg
atcatttttacggtggaagcatttctgaaagttattgcatacgggctgctgtgtcaccct
aatgcgtacctgcggaacggctggaacttgttggatttcatcattgtggtggttgggctc
ttcagtgcaatattagagcaggccactaaaggggacggtgggacttcaatgggaggcaag
gctgcagggtttgatgtaaaagccctgcgagcctttagagtgttgagacctctgagactc
gtatctggagtacctagtttacaggtggtgctgaactccatcattaaagccatggttccc
ctcctgcacatcgctctgctcgttctgttcgtcatcatcatttatgccatcatcggcctc
gagctcttcatgggcaagatgcacagaacctgttttttcttcaaagatggacacaaaggt
actgtatctgaagagaaaccggccccctgcgccccaaactctgcccatggacgacattgc
accccggccaacgtaacgcagtgcttgatgggatgggagggcccaaatgatggaatcacg
aactttgataactttgcatttgccatgctgactgtgtttcaatgcatcacgatggagggc
tggactgacgtcctgtactggatgcaggatgccatgggttatgagcttccgtgggtctat
tttgtcagtctggtcatctttggatcctttttcgttctaaatctggttctgggtgtgtta
agcggagagttctctaaagagcgagaaaaggccaaagctcgtggagatttccagaagctc
cgtgagaaacagcagctggaggaggatctaaagggctacctggactggatcacgcaggca
gaggatatcgaccctgagaacgacgacgagggactggacgacgacaagcctagaaatcgg
aagactcatcgtttacagtacatccgtggagcggtgaagaaaaaagcagctctgcttcgt
aaggcgttgagtatgccggccagtgaaaatgagtcagtgaacactgataatgctccagct
ggagacatggagggagagacctgctgtactcgcatggcaaataggatctccaaatccaaa
ttcagtcgatattcacgccgatggaatcggttatgtcggcgtacgtgccgtgcagcagtg
aagtcaaatgtgttctactggctggtgattttcctggtatttttgaacacacttacaatc
gcctctgagcaccaccagcagccacaatggctcaccaatgttcaagaaatcgccaataag
gtgttgctggctctttttactggtgagatgctgctgaagatgtacagcctgggtctacag
gcctatttcgtctccctttttaaccgctttgacagttttgtggtgtgcggtggaattctg
gagactatcctggtggaaatcaagatcatgtcacccctcggcatctctgtgctgcgctgt
gtgcgtctgctccgcatcttcaagatcaccaggtactggaactctctcagtaatctggtg
gcatctctgctgaactcggtgcgttctatcgcgtccctgcttctgctgctcttcctgttc
attatcatcttcagtctgcttggaatgcagctctttggtggcaagttcaactttgatgag
acgcgccgcagcaccttcgataacttcccccagtctctcctcaccgtctttcagattttg
accggagaggactggaactctgtgatgtatgatgggatcatggcgtacggtggaccctcc
tttcctggcatgcttgtctgcatttatttcatcatcctcttcatctgcggaaactacatc
ctcctgaatgtcttcttggccattgccgtggacaacctggcagacgccgagagtctgaca
tcagcgcagaaagaggaagaggaggagaaagagaggaagaagctggccagaacggccagt
ccagagaagcgtcaggattctgagaaaccacctctggaggatgaaaagaaagaggaaaag
attgaattaaaatccatcacttctgatggagagactccaactgccactaagatcaacata
gatgagtacacaggggatgagaacgaagagaagaatccatatcctgtgaacgatttccca
gcaggagaggaggacgatgaggagccagagatgccagtaggtcctcgtccacgtccactc
tccgacattcagctgaaggagaaagccgtccccatgccagaagccaaagctttctttatt
ttcagcccctctaacaagttcagggttttgtgtcataagattgtaaaccacaacatcttc
accaatttaatcctgttctttatactgctgagcagtatttcactggcagccgaagaccca
gtgaataatgactcattcaggaatcagattctaggctatgcagattatgtgtttacagga
atcttcaccatagagatcatattaaagatgacagcgtatggagcattcctacataagggt
tcattttgtcggaattattttaatattttggatctggtggtggtcagtgtgtctctgatc
tcctctggaattcagtcaagtgccattaatgtagtgaagattctcagagtgctgagggtg
ttgaggcccctgagagcaatcaacagagccaagggcctcaaacatgtggtccagtgtgtg
tttgtagccatccgtaccatcgggaacatcgtcatcgtcaccactttgctgcagttcatg
tttgcttgtattggtgttcaacttttcaagggcaaattcttctactgcacagacacctct
aaacagacacaggccgaatgccgggggtcctatatattatacaaagatgggaatgttggg
aagccagagaaagcacagcgttcatgggagaacagtgacttcaactttgatgatgtcctg
cagggcatgatggctctgtttgccgtgtccacttttgagggttggccagggctcctctac
agagccatcgactcccatgcagaggatattggtccaatctacaactaccgtgtgatcatc
tctatattcttcatcatctacatcatcatcatcgccttcttcatgatgaacatattcgta
ggtttcgtcattgtgacatttcaggaacagggagagcaagagtacaaaaactgtgagctg
gacaagaaccagcgccagtgtgtggaatacgccctgaaggcccgtcccctacgcaggtac
atccccaagaacccatatcagtacaaggtgtggtacgtggtgaactccacttactttgag
tacctgatgttcaccctcatccttctcaacaccatctgcttggccatgcagcatcatggc
caatctcagtccttcagcaaagctatgaatatcctcaatatgttgttcaccggcctcttc
actgtggaaatgatcctcaaactcatcgccttcaaacccaggggttactttagtgacccc
tggaatgtttttgacttcctcatcgtaattggcagcattatagacgtcattctgagtgag
atcaaccattattttgttgatgcatggaacacgtttgatgcccttattgtagtgggtagt
gttgttgatatagccatcacagaggttaacccagctgacccctcctcctctcccccctcc
tctgtggtaagaccaatgggcctccaaaacactgaagataacgccaggatctcaatcacg
ttctttcggctgttccgcgtgatgaggctggtgaagcttctgtctcggggagagggcatt
cggacgctgctctggaccttcattaaatcctttcaggctcttccctatgttgctttactg
atcgtaatgctgttcttcatctacgccgttattgggatgcagatgtttggtaagattgcc
ctgagggaccacagccagatcaaccgaaacaacaactttcagacgtttcctcaggctgtt
ctgctgctcttcaggtgtgcaacaggggaggcatggcaggaaataatgctggcctgttct
ccgaaccgcccatgtgaaaaggggacagaggtcggccattccagtgaagactgtggcagc
cactttgccatcatctactttgttagcttttatatgctttgcgccttcctgatcattaac
ctctttgtggctgtcatcatggacaactttgactatttaacacgtgattggtcgatattg
gggccacatcacctggatgagtttaagaggatatgggcagaatatgatcctgaggcaaag
ggtcggataaagcacctggatgtggtgacgttactgcgcaggattcagcctccccttgga
tttggaaagctttgtccacatagagtagcttgcaagcggcttgtgtccatgaacatgcct
ctcaatagtgacgggacggtaatgttcaacgcaactctctttgctctagtaagaacggct
ctacgcatcaaaactgaaggtaacttggagcaagcaaatgaggaactcagggccatcgtg
aagaagatctggaagaggacgagcatgaagctgctggatcaagttgttcccccggctgga
gatgatgaagtaaccgttgggaagttctatgccacattcctgattcaggaatacttcagg
aaatttaagaagcgcaaggaacagggactggtggccaaaattcccccaaagactgctctt
tcattgcaggctggcctgcgtacactgcatgatatgggtcctgagatcagaagagcgata
tcaggagacctgactgtggaggaggagctggagagagccatgaaggaaaccgtgtgtact
gcttctgaggatgatatcttcagggtaaagcggtctggcggcctcttcggtaaccatgtc
aactactaccatcagagtgatggccatgcctccttcccacagtccttcacaacacagagg
ccattgcacatcagtaaatctgggagtcctggcgaggcagaatctccctctcatcagaag
ctcgtcgactccaccttcactccgagcagttactcttcctcaggatccaacgcaaacatc
aacaatgccaacaacacagcaatcggacaccggtaccccaaacctaccgtcagcacagtg
gacggacaaacggggccgcccctcaccaccgttccactaccacggcccacatggtgcttt
cctaacaagaggagctgtttctatgacactttcatgcgctctgattccagtgacagtcgt
ctccctataatacggcgagaggaagcatctacagatgagacgtatgatgaaacatttcta
gatgagagagatcagaccatgctctcaatggacatgctggaatttcaggatgaagagagc
aagcaattggctccaatggtggaggcggatgtaggggaagagaggaggccgtggcagtct
ccacgaagacgggcctttctctgccccactgcactgggtcgacggtcttcctttcacttg
gagtgtctgagaaaacataacagacctgatgtttctcagaaaacagctctaccactgcac
ctagtgcatcatcaggctcttgctgtggcggggttgagtcccttactgagacggagtcat
tctccgacgctgttcacgcgtctgtgctccacacctcctgcgagtcccagcggccgcggc
gggggagggccgtgctaccagcccgttccgtctctgcggctggagggcagcggatcttac
gagaaactcaacagcagcatgccgtctgtgaactgcagctcatggtacagtgacagtaac
ggcaaccacagcaggagtgtgcagaggacgcagcgacccgtgtccctcacggttcctccg
gtcacacgcagagattccacatccctgtcacacgggagcgccggcagccttgtggaggcc
gtgttgatatccgagggtttgggtcgctatgcacaggatcccaccttcatccaggtagcg
aagcaggaactagcggacgcctgcgacatgaccatggaggagatggagaacgccgccgac
aacattctcaacgccaacgcaccgcccaacgccaacggaaacctgctacccttcatacag
tgcagagacactggctcgcaggagtcccgttgcagccacgcgctgggcctctcgaccgcc
acgggctctgacgagctgctgggggcggagctagagtgctccgagggggcggggcagcgg
aacagcactctgttggaggacgaggacatggagtgcgtgaccagtttgtag
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integrated database retrieval system
