KEGG   Onychostoma macrolepis: 131539000
Entry
131539000         CDS       T09350                                 
Symbol
apaf1
Name
(RefSeq) apoptotic protease-activating factor 1 isoform X1
  KO
K02084  apoptotic protease-activating factor
Organism
omc  Onychostoma macrolepis
Pathway
omc04115  p53 signaling pathway
omc04210  Apoptosis
omc05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:omc00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    131539000 (apaf1)
   04115 p53 signaling pathway
    131539000 (apaf1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    131539000 (apaf1)
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 WD40_CDC20-Fz APAF1_C Beta-prop_EML_2 NB-ARC EIF3I WDR55 Beta-prop_TEP1_2nd APAF-1-like_WHD WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_EML Beta-prop_WDR75_1st WDR90_beta-prop_4th CARD Beta-prop_IFT122_1st Beta-prop_WDR19_1st NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_TEP1_C RMC1_N Beta-prop_RIG_2nd Beta-prop_IFT140_1st Beta-prop_HPS5 Beta-prop_NWD2_C Beta-prop_Vps41 Beta-prop_EIPR1 Beta-prop_NUP159_NUP214 Beta-prop_WDR35_TULP_N Beta-prop_Nup120_160 Ge1_WD40 PEP5_VPS11_N WD40_like AAA_16 CARD_2 NACHT Beta-prop_IFT140_2nd
Other DBs
NCBI-GeneID: 131539000
NCBI-ProteinID: XP_058629225
LinkDB
Position
04:complement(23615744..23640924)
AA seq 1299 aa
MEERARSCLLRSKATLEQDIKASYLMDHMVSDGVLTNDEESRVLSKPTRREQAAALLEVL
LRKDNRAYISFYNALIRESYGDLASILHSDLPLLSPEGERSFADGLSPSVQAILSEGGVP
QRPVVFVSRPTLLNLIREKLYRLQNTPGWVTVFGMAGSGKSVMAAEAVRDRALIKECFPG
GVHWLSVGQCERADLLVRMQSLCFRLEQGQSSEASQRPPCSVEEAKERLRFLMLRRFPRC
LLILDDVWDSSTLRSFDIQCRVLLTTRNRGLADSVSGTSFEVPFESGLDEEKALEILALY
VNGKPQKLPEQARSIVSECKGSPLVVSLIGALLREFPDRWRYYLRQLQKKQFKRIRKSSS
YDYEALDQAMDASLQVLEPEHQDLYRDLSIMQKDVKVPAKVLSVLWDLELEEVEDVLQEF
VNKSLLFRDCNQRPYHYYLHDLQLDFLIEQNRDQIAELHKKLVRQYQHFYNERPPSSGDI
DRSYWYRFLPYHMAKAGLSKELYSLMFSLDWVKEKAQFMGSAHLINDYVEYGEILDKENS
EVRLQFQEFLSLNGHHLEQRPFPDVVQLALSQPVCSEVYRQALMQAQKRASRGQLYLDWM
NKNNQDSLSRLVMHPHQGSVYYACFSKDGSKIASCGTNKALRLFKTTSGEKLMELQAHDE
DILCCAFSPDDRYIATCSSDRKVKLWSVEQGTLIREFWEEHEEQINHCQFTNTGRRVLLA
TCSNDKFTNTKLWNPNKPSSQNTMFGHMEPVNHCCFSPNDTYLATSSSDGTLKLFEVSSA
NEWKSIDVNSFFPETDDEIKAIVKCSTWSADGSRIICAARNAVFVFDVKTSDMLLEMKTS
RLSTVQYCHACPNSSLLAVALSHYTVELWNFETSKKKAECNGHLSWVHCVQFSPDGSLLL
SSSDDQTIRLWETDRVHTSSAAALKRDSDVLFSHSDVTIVAPDSRNRLQVRTGSAGAVLF
ESEELPSRIRCTCISRNASFVALGTEDGTAQTGRVKVRQFLKNVGWRALQLLNLQRDFVL
ALGLETGTVQVLEVPSGRTSPLTGHTRTVHHCQFTDDGETLITSSEDTTVRVWKWRTGEC
LVLEGHKEPVRKFHLLNNSTSSHLFSWSFDGTVKVWDLDRGQMLQNLECHKGAVLSCDVS
SDGCLFATTSADRTAKVWGSASWEMTFLLMGHKDCVRSCRFSWDNKQLATGDDNGEIRLW
RMLDGALLKICSRDTKDSMDSFHGGWLTDLHFSPDNRVLVSTGGYIKWWSAETGEALQTF
YTMGANLKKIHVSADFTTFVTVDSIGILYVLKKVEGGSL
NT seq 3900 nt   +upstreamnt  +downstreamnt
atggaggaacgcgctcgcagctgcctgctgcgctccaaagccactctggagcaggacatc
aaggcctcctatttgatggaccacatggtcagcgacggcgtcctgacaaatgatgaagaa
tcaagggtgcttagcaagcccactagaagagagcaggctgcagccctgctagaggtgcta
ttgaggaaagacaatcgggcctacatctccttctacaatgcgctgatcagggagagttat
ggcgatctggccagcatccttcatagtgacctgcctctcctcagccctgagggagagagg
agctttgctgatggactatctccctctgtccaggcgattctcagtgaaggtggcgtgcct
cagagacccgtggtgtttgtgagccgacccactctgctcaacctgatccgggagaagctg
taccgactgcagaatacgccgggctgggtcactgtgtttggcatggctggctcagggaag
tctgtgatggctgccgaggctgtccgagaccgtgccctcattaaggagtgttttccaggt
ggcgttcactggctttctgtcggccaatgtgagcgggcagacctgttggtaaggatgcag
tctttatgtttccgtttggagcagggtcaaagttcagaagccagtcagcggccaccctgc
tccgtggaggaggccaaagagcgcctacggttcctaatgctgcgcaggttccccaggtgc
ctgctgattctggacgacgtctgggacagctctactctcaggtcctttgatatccagtgc
agggttcttctgaccactcgcaatcgaggactggccgactctgtaagcggtacaagcttc
gaagtgccttttgagagtggtctagatgaggagaaagccctggaaattcttgctttgtat
gttaacgggaaaccacagaaacttccagaacaggcccgcagcattgtgagcgaatgtaaa
ggttctcctctggttgtttctctcattggagctttattgagagagttccctgaccgctgg
agatactacctgcgacagctgcagaagaagcagttcaagcggatccgcaagtcatcgtcc
tacgactatgaagctctggaccaggccatggatgccagcctgcaggttttggagcccgaa
caccaagatctgtaccgagacctgagcatcatgcagaaagacgttaaagtgcctgctaag
gttctgtcagtgttgtgggatctggagttggaggaagtggaggacgtcctacaggagttt
gtgaataaatctctgctgtttcgagactgtaaccagcgaccataccactattaccttcat
gatctgcagctggactttctcatcgaacagaatcgtgatcaaattgctgaactgcataaa
aagctggtccgtcagtaccagcacttctataatgaaaggccacccagctctggagatata
gaccgttcgtattggtaccgcttcctcccgtaccacatggctaaagcgggactgtctaag
gagctttattcactgatgttttccttggactgggtcaaagagaaagctcagtttatggga
tctgcccatcttatcaacgactacgtagaatacggtgaaatactagacaaagagaacagc
gaggtgagactgcagtttcaggagttcctgtctttaaacggacatcatttggagcagagg
ccgtttcctgacgtagtgcagttggctctgtctcagcccgtgtgttcagaggtttacaga
caggccttgatgcaggcgcagaagagggccagcagagggcagctctatctggactggatg
aacaaaaataatcaggacagtttgtctcggctggtcatgcatcctcaccaggggtctgtt
tactatgcttgcttctccaaagatgggagtaaaatcgcctcttgtgggaccaacaaggcg
ctgcggctgtttaaaacaacctctggagagaaacttatggagcttcaggctcatgacgaa
gacattctgtgctgtgccttttctccagatgaccgttacattgcaacctgctccagtgac
aggaaggttaagttgtggagtgttgagcaaggtactcttatcagagagttttgggaggaa
cacgaggagcagataaaccactgccagttcaccaatacaggccgacgtgtcctgctggcc
acctgctcaaacgacaaattcaccaacactaagctatggaaccccaacaagccgagctct
cagaacactatgtttggacacatggaacctgtcaatcactgttgcttttctcctaacgac
acctacctcgccacttcatccagtgacggcaccttgaagctgtttgaggtgtcatctgcg
aacgagtggaaatcaattgatgtcaatagttttttcccagagactgacgatgaaataaaa
gccatcgtgaaatgcagcacttggtcggccgatggctcacggatcatttgtgctgccaga
aatgctgtgtttgtgtttgacgtgaagacgtcagacatgctgttggagatgaagacgagt
cgtctgagcacagtgcagtactgccacgcgtgtcccaacagcagcctgctggccgttgca
ctctctcattacactgtagagttgtggaactttgagaccagtaaaaagaaagccgaatgc
aatggccacctgagctgggttcactgtgtccagttttcacccgatggctcactcctgttg
tcctcttctgatgatcagaccatcaggctgtgggagacagatcgggttcacacctcctct
gctgcggctctgaagagggattctgatgttctcttctcccacagtgatgttacaatagtg
gcaccagacagcagaaacagattacaggtacggaccggatcagcaggtgccgttctgttc
gagagcgaagagctgccatccaggattcgctgtacttgcatcagcagaaatgcttcgttt
gtggccttgggaactgaggatggaactgcacagacaggaagagtgaaagttaggcagttt
ctgaagaacgttggatggagagccttgcagctgctgaacttacagcgtgattttgtgctg
gcgctagggctagagacaggtacagtgcaggtgttggaggttccatctggaagaacatca
ccgctcacaggtcatactaggactgttcaccactgtcagttcaccgatgatggtgaaacc
ctcatcacatcctcagaagacactactgtccgggtgtggaagtggaggacaggtgagtgt
ctggtgctggagggccataaggagccggtcaggaagtttcatctgttgaacaactctact
tcctctcacctgttctcttggtcgtttgatggcactgtcaaggtctgggatctggacaga
ggtcagatgctgcaaaacctcgagtgtcataagggtgctgtcttgtcatgtgacgtgtcc
tctgatggatgtctctttgccaccacatcggccgataggactgctaaggtgtggggcagt
gcctcgtgggagatgacttttttgctgatgggacacaaggactgcgtccgtagctgccgt
ttttcttgggacaacaagcaacttgcgacgggcgacgacaatggagaaatcaggctgtgg
cgcatgctggatggagctcttctgaagatctgttcacgggacactaaggactccatggac
tctttccacggtggatggttgactgacctgcacttctcccctgataacagagtactggtc
tctacaggcggatacatcaagtggtggagtgcagagaccggagaggccttgcagacattc
tacacgatgggagccaatctgaagaagatccacgtgtcagctgatttcaccacgtttgtc
accgtggacagcattggaatcctttatgttttaaagaaggtggagggaggaagcctctag

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