Onychostoma macrolepis: 131540710 Help Entry 131540710         CDS       T09350                                  Name (RefSeq) TNF receptor-associated factor 2   KO K03173   TNF receptor-associated factor 2 [EC:2.3.2.27] Organism omc  Onychostoma macrolepis Pathway omc04010   MAPK signaling pathway omc04137   Mitophagy - animal omc04141   Protein processing in endoplasmic reticulum omc04210   Apoptosis omc04217   Necroptosis omc04621   NOD-like receptor signaling pathway omc04622   RIG-I-like receptor signaling pathway omc04920   Adipocytokine signaling pathway omc05132   Salmonella infection omc05168   Herpes simplex virus 1 infection Brite KEGG Orthology (KO) [BR:omc00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04141 Protein processing in endoplasmic reticulum     131540710  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     131540710  09140 Cellular Processes   09141 Transport and catabolism    04137 Mitophagy - animal     131540710   09143 Cell growth and death    04210 Apoptosis     131540710    04217 Necroptosis     131540710  09150 Organismal Systems   09151 Immune system    04621 NOD-like receptor signaling pathway     131540710    04622 RIG-I-like receptor signaling pathway     131540710   09152 Endocrine system    04920 Adipocytokine signaling pathway     131540710  09160 Human Diseases   09172 Infectious disease: viral    05168 Herpes simplex virus 1 infection     131540710   09171 Infectious disease: bacterial    05132 Salmonella infection     131540710  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:omc03019]     131540710    04121 Ubiquitin system [BR:omc04121]     131540710 Enzymes [BR:omc01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      131540710 Messenger RNA biogenesis [BR:omc03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     Stress granule specific factors      131540710 Ubiquitin system [BR:omc04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     131540710 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TRAF-mep_MATH MATH_2 TRAF_BIRC3_bd zf-TRAF TRAF2_zf TRAF3_RING zf-C3HC4 zf-C3HC4_2 ATG16 zf-C3HC4_4 zf-RING_6 Sina_ZnF Rootletin Motif Other DBs NCBI-GeneID:  131540710 NCBI-ProteinID:  XP_058631879 LinkDB All DBs Position 05:complement(41467055..41487949) Genome browser AA seq 592 aa AA seqDB search MAAQEPSPPSSMENNKPGFPKKILANKLEDKHLCNCCQNILRRPFQAQCGHRFCFYCFNR TVGSGPQKCNACIKENIFEEPTSILIQGCAFPDNAARREVENLPAVCFNEGCSWKGSIKD YELSHEGKCEFMILPCPLCKELIRLNEQERHNERECPERTLNCKYCKEPFHFKKIKAHDE ICPKYPMICEGCAKKKIPREKYVDHIKFCSKFRTPCRYHVVGCDMSVEKEKIHDHERACA HEHLNLLLHYIMGMKVGLEGLQPQSLELAGHKAHELHQALRDLETRVGQLSAIPGPTGPP VQGVPSSSSSSSSASAAAAPLPPPPPAATLSTSFTPLPSSVGAALELQLHSEKTKVADLG RRCQELEVKAGTFEDVVCVLNREVERFATTMEASNRQHRLDQDKIEALSNKVRQLERQVG VKDLTVAEMEGRLREMSATTFDGVFIWRISDFTKKRQDAIAGRAPAMFSPAFYTSKYGYK MCLRIYLNGDGTGRGTHLSLFFVVMRGMSDALLKWPFNQKVTLMLLDQSNREHIIDAFRP DITSSSFQRPVSEMNIASGCPLFCPLSKLEGKNSYIRDDTIFIKAIVDLTGL NT seq 1779 nt NT seq  +upstreamnt  +downstreamnt atggctgctcaagaaccctctcccccgtcctccatggagaacaataagccagggttccca aagaagattctggccaacaaacttgaagacaaacatttatgcaactgctgtcagaacatt ttgaggagaccgttccaagcgcagtgcggccatcgcttttgtttttactgcttcaaccgg actgttggatctggaccgcagaaatgtaatgcctgtatcaaggagaacatcttcgaagag cccacgtcaatcctcatacaaggatgcgcgtttcccgacaatgctgccagaagagaagtt gaaaatcttccagccgtgtgcttcaatgaaggctgctcctggaaaggcagtattaaagat tacgagttgagtcatgaggggaagtgtgagttcatgattcttccgtgtcccttgtgcaaa gagctcattagactgaacgaacaggagcgtcataatgaacgcgagtgtcctgagagaacg ctcaactgcaagtactgtaaagagccatttcacttcaaaaagatcaaggcccatgatgag atctgtcccaaatatcctatgatttgtgaaggatgtgcgaagaagaaaatccccagggaa aagtatgttgaccacatcaagttctgcagcaaattcaggactccttgcagatatcatgtg gttggctgcgacatgtcagtggagaaggagaagatccacgatcacgagcgtgcctgtgct cacgaacatctcaacctgctgttgcactacatcatgggcatgaaggtcggtctggagggc ctgcagccccaaagcctggagctggccggtcacaaagcacacgagcttcaccaggcgctc cgagacctggagaccagagtcggtcagctgagcgccatccccggcccgaccggacctccc gtgcagggggtcccctcctcttcatcctcgtcctcctccgcgtccgccgccgccgcgccc ctgcctcctcctccacccgccgccacgctgtccacctccttcactcctctgcccagctcg gtgggcgcagcgctggagctccagctgcacagcgagaagaccaaggtggcggatctgggc cgtcgctgccaggagctggaggtgaaggcggggacgtttgaagacgtggtctgcgtgcta aaccgagaagtggagcgcttcgcaaccaccatggaggccagcaaccgccaacacagactc gatcaggacaaaatcgaggctcttagtaacaaggttcgtcagctggagcgacaggtgggc gttaaagacctgactgtggctgaaatggagggcagattgcgggagatgtctgctaccacg tttgatggtgtcttcatttggcggatatcagatttcactaaaaagagacaagatgccatt gctggacgggcgcctgccatgttttcacccgcattttacacaagcaagtacggctataag atgtgcctgcggatttacctgaacggggacgggacgggtcgtggaacgcatctctcgctg ttttttgtggtgatgagaggaatgagtgatgcgctgctcaaatggcccttcaaccagaag gtgacgctgatgctgctggaccagagtaacagagagcacatcatcgatgcgttccgtccc gacatcacttcctcctcattccagaggcctgtaagcgagatgaacatcgccagcggctgc ccgctcttctgtccactgtccaagctggagggcaagaactcatacatacgtgacgacacc atcttcatcaaagccatcgtggacctcactggcctttag

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