Onychostoma macrolepis: 131548058
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Entry
131548058 CDS
T09350
Symbol
tiam1a
Name
(RefSeq) rho guanine nucleotide exchange factor TIAM1 isoform X1
KO
K05731
T-lymphoma invasion and metastasis-inducing protein 1
Organism
omc
Onychostoma macrolepis
Pathway
omc04530
Tight junction
omc04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
131548058 (tiam1a)
09142 Cell motility
04810 Regulation of actin cytoskeleton
131548058 (tiam1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
omc04990
]
131548058 (tiam1a)
Domain-containing proteins not elsewhere classified [BR:
omc04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
131548058 (tiam1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
Tiam_CC_Ex
PH
PH_9
RBD
PDZ
PDZ_6
PDZ_2
PH_11
Motif
Other DBs
NCBI-GeneID:
131548058
NCBI-ProteinID:
XP_058644969
LinkDB
All DBs
Position
10:11880478..11956117
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AA seq
1619 aa
AA seq
DB search
MGNIESQNGDHAYYVEGQGHLSRKHMTRSLRISNKQSRRSRHASSSKAQHCNSETSTKSS
STPSIPQSLSENGLEPFNEKNALEGYGGTIWVDRMAMNLRPMSFHDNMGDPTTTPGSEDG
VEMDTVVADNCDDEGEDTYLQRTRDGPREGGSFKKKRSRSADMWREDSMEFSLSDLSQEH
LTSTEEIIGTNEDEDKGFTNCGGRRRTSSPRTLETHSGERANSLDELCTQRLRPLHGSHH
LYNGHKPERTEGGVMNGEILSPAEEEGKGYGAYTLPCRRSHCLSEGLSNHQTTICSRMQG
RRAKTTHDITAGEGSEYGDSGIDGGAAEVEHSSRRCKAMSASFSVYSTASGSIFAGSDSG
SSSGGGGDRERQPGGDQGVYENFRQELDLNSRQTWDCLEEAGSAASDERSSGTLSSIYPS
DILLSTVQGTVRKAGLLAVKNFLVHKKNKRVEPAAKRKWKQYWVSLKGCTLFFYETDGRS
GIDHNSIHKHAVWVENSIVQAVPEHPKKDFVFCLSNALGDAFLFQTSGQTELENWITAIH
SACAAAVARQHHREDTVRLLRSEIKKLEQKIDMDEKMKKMGEMQLSSVTDGKKRKTILEQ
IFLWEQNLEQFHMDLFRYRCYLSSLQGGELPNPKRLLAVASRPTKLSMGRLGIFSVSSFH
ALVAARTDGGIRRRTQALSRSSSKRKSRFSSLWGLDTTSKKKTKGRPSINQVFVDGGESV
KRNLEHMFEDTGKEMLKDQEGLVNSLAQHKTDSEVWVPDYLTPSWVSLPDDRPVLAIIQP
GETAMEALEALCRAYKLELSKHYIRLKFLVDNQVQLYVPKPEEDLCDLLYKEIEICAKTT
KVIQFDRDESCAIGYGFSVAVVEEDGGQQLHITDVKAGGLAFAKGLRAGDEILKLNSKTA
SVLELADMQAAFSLPSLTLTVSMLPATDPHQLCQMPPRRSDGAQDLCTDIFSQSQEDILD
EGLGLVLHSPDDTGDDRVNLMADSPADSLEDETDSAHKSTDQVTAFCRNLHDMNSTEGPV
SYSSTSSSSSSCVPSPISPLPVLFTPRQLSDADKLRKVISELVDTERTYVKDLNILIERY
LNPLQKERFLSQDELDVLFGNLAEMVEFQVEFLKTLEDGTRLVPDLDKLERVDQFKKVLF
SLGGSFLYYADRFKIYSAFCASHTKVPKVLTKAKTDPEFKAFLAERNPKQQHSSTLESYL
IKPIQRVLKYPLLLRELHSLTDPDSEEHYHLDVAMKAMNKVASHINEMQKIHEEYGAVFD
QLISEQSSDKKEVADLSMGDLLLHDTLVWINPPSSLMKGKRDPELAAFVFRTAVVFVYKD
CSKHKKKIGGSHRASILDERDPFRFRHMISTDTLQVRNLPNSEGSAMCEIVHMRSESEGR
PERTFHICCSSPESKKDFLKTVHSVLRDKQRRQLMKTESLPPNQQYIPFGGKRLCALKGS
RPTINRAVSAPSRTLGRRKLIRNRFTIDTSVVFDDGSSQELSPISPTEPPLSSLQKPQLP
IRDTDRWVEDQFDLQHYENQDNVKETDILSDDDEYCQSVRGPSSEPSLEESLEALSVEGV
EDKGLNGLSDDKPPKSHAPLKLTLLRKQCAVEGVTSERDCEVIWVRRDDFKNSCNSDIF
NT seq
4860 nt
NT seq
+upstream
nt +downstream
nt
atgggaaacatagagagccaaaatggagaccacgcctactacgttgaggggcagggccac
ctctcacgaaagcacatgacccgatcacttcgtatctctaacaagcagtctcggcgatca
cgtcatgcctcatccagcaaggctcaacactgcaactctgagaccagcacaaaatccagc
agcaccccttccatcccacaatccctgagtgaaaatggcctggaacccttcaatgagaag
aatgctttggagggctatggaggcaccatttgggtggaccggatggccatgaacttgcgg
ccgatgtccttccacgacaacatgggggatcccaccaccacgccaggctctgaagacgga
gtggagatggacacagtggtggcagacaattgtgatgatgaaggtgaggacacgtacctg
cagaggaccagagacggtcctcgagaaggtggaagctttaagaagaagcgctccagatct
gctgacatgtggagagaggattccatggagttttccttgtcggatctaagccaagagcat
ctgacaagcacagaggagattatagggacaaatgaggatgaagacaaaggctttaccaac
tgtggaggacgccgtcgcacctccagcccgcggactctcgagactcattcaggagagagg
gccaactctttagatgaactttgcacacagaggctacgtcctcttcatggctcccaccat
ctctataatggtcacaagcccgagaggacggaggggggtgtaatgaatggtgagatcttg
tctcctgcggaggaggaagggaaaggatatggagcatacactcttccttgtcgtcgttct
cactgcctgtcggaaggactgtccaatcaccagactaccatctgctcacgtatgcaggga
cggcgggcaaaaacaacacatgatatcacggccggtgagggcagcgagtatggagacagt
ggtattgacggtggcgcagctgaagtcgagcattcctcacgccgttgcaaggccatgtct
gcatccttctccgtctactctactgctagcggaagcatcttcgcgggaagcgacagtggc
agtagcagcggaggtggaggagaccgcgaacgtcaaccgggtggagatcaaggcgtatac
gagaacttccgtcaggagctggacttgaactcacgacagacgtgggattgcctcgaagag
gccggttcggctgctagcgatgagaggagcagtggaacgctaagctccatttacccctca
gacattctgcttagcacggtgcagggcactgtgcggaaggccggcctgctggctgtgaag
aacttcctggtgcacaaaaagaataagagggtggagccagcagcaaaaaggaaatggaaa
cagtactgggtgtcactcaaaggatgtactctgtttttttacgaaacggacggacgttca
gggatcgaccacaacagcatccacaaacatgcagtctgggtggagaacagcattgttcag
gctgtcccagaacatcccaagaaagactttgtgttttgtctgagcaatgcactgggagat
gccttcctcttccagacatcaggtcaaacagagctggaaaactggataaccgccatccac
tcagcctgtgccgcagctgtcgcccgtcagcaccaccgcgaggacactgtacgattgctg
cgctctgagatcaagaagcttgaacaaaagattgacatggatgagaagatgaagaagatg
ggcgaaatgcagctctcttccgtcactgatgggaagaagaggaagactatcctagagcag
atattcctctgggagcagaatttggagcagtttcatatggacttgttccggtatcgctgt
tacctgtccagcctgcagggcggcgagcttccaaatccaaaacgcctactcgccgttgct
tcccgtcccaccaaactgtccatgggtcgtcttggcattttttcagtatcgtccttccat
gccctggtggcagcgaggacagatgggggaattcggagacgtacccaggccctgtctcgt
tcctccagtaaacgaaagagccggttctcctctctgtggggtttggacactacctcaaaa
aagaaaaccaaaggcagacccagcatcaaccaggtgttcgtagatggtggagagtcggtt
aagaggaatctcgagcacatgtttgaggacactggaaaggagatgctgaaggaccaagag
ggtttggtgaacagtctcgcccaacacaagacggacagtgaagtttgggtacctgactat
ctcacaccatcctgggtctctttacctgatgatcggcctgtgttggctatcatacagccg
ggggagacggccatggaggccctggaggcactgtgcagggcttacaaactggaactttcc
aagcactatatacggctgaagttcctcgtcgacaatcaagtgcaattgtatgtccccaag
cctgaggaggacctctgtgacctgctctacaaagaaattgaaatttgtgccaagacaacc
aaagtcatccagtttgatagagatgagtcctgtgccataggctatggattttcagtggca
gtagtagaggaggatggaggccagcagcttcatatcactgatgtgaaagcaggaggtctg
gcatttgccaaaggtctgcgagcaggtgatgagattctgaaactgaacagtaagacggcg
agtgtgttggagctggctgacatgcaggctgcgttttctttgccctctctcaccctgact
gtcagcatgctgcccgctaccgatccgcaccagctgtgccagatgcctccccgccgatcg
gacggggcacaggacctctgcactgacatcttctcccaaagtcaggaggacatcctggat
gaaggtcttggcctggtgctgcacagccctgatgacacaggcgacgacagggtaaaccta
atggctgacagccccgctgacagcctggaggatgaaacagactcagcacacaagagtaca
gatcaggtgactgctttctgccgcaaccttcatgatatgaattccaccgagggtcccgtt
tcctattcctccacatcatcctcctcttcatcctgtgtgcccagccccatctcacccctg
ccagttctcttcaccccacgccagctctccgatgctgataaactgcgtaaggtcatcagt
gagctggtggacactgagaggacctatgttaaggacctgaacattttgatagagcgctac
ctgaatcccctgcagaaggagaggttcctctcacaggatgagctggatgtgctttttgga
aacttggcagagatggtggaattccaagtggagtttctgaaaactctggaagatggaacc
agattagttccagatttagacaaactggagagagtggatcaattcaagaaagttctgttt
tctcttggtggatccttcctgtactatgcggatcgttttaagatctacagtgctttttgt
gccagccacacaaaggtcccaaaggtccttaccaaagctaaaaccgacccggagttcaag
gcattcctggctgagaggaaccccaagcaacagcactcttccacgctggagtcctacctg
atcaaacccattcagagagtcttaaaatacccactactcctgagggagcttcactccctt
accgaccctgacagtgaggaacattaccatctggatgttgcgatgaaagccatgaacaaa
gtggccagtcacataaatgaaatgcagaagattcacgaggagtatggagcagtgtttgac
caactcatcagcgagcagagctctgacaagaaagaggttgcagatctgtcaatgggtgac
ctcttgttgcatgacacactggtctggatcaacccaccctcttctctcatgaaggggaag
agggacccagagctggctgcgttcgttttcagaacggcagttgtttttgtgtataaggac
tgctccaagcacaagaaaaaaatcggtggatctcacagagcatcaatccttgatgagaga
gacccttttcgttttagacacatgatctctacagacactctccaagttcgcaacctccct
aattcagaggggtctgcaatgtgtgagatcgttcacatgaggtcagaatcagaagggaga
cccgagaggaccttccacatctgctgcagctctccagagagtaaaaaagacttcctgaag
actgttcattctgtcctgagggacaaacaacgccgtcagttaatgaagactgagagtttg
cctccaaatcagcagtatattcccttcggagggaagcggctttgtgcgctaaagggttca
cgacccacaattaacagagcagtttcagctccatctcgaaccctcggccgccggaagctg
atccggaatcgtttcaccatagacacgagtgtggttttcgacgacggctcatcccaggag
ctctcacctatctccccaacagagcccccgctgtcttcgctccagaaaccccagctgccc
atccgagacacagatcgctgggtggaggatcagttcgacctgcagcactacgaaaatcag
gacaacgtgaaggagacggacatcctcagcgacgacgatgagtactgccaatccgtccgg
ggcccttcctctgagccgagtctggaggagtctttagaggccctttcagtagaaggagtc
gaagacaaaggtctcaacggactttcggacgacaaacccccgaaatcccacgcccccctg
aagctgaccctcctgagaaagcagtgcgcggtggagggtgtcacatctgagagggactgt
gaggttatttgggttcgcagggacgattttaaaaacagctgcaacagcgacatcttctga
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integrated database retrieval system
