Onychostoma macrolepis: 131548076
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Entry
131548076 CDS
T09350
Symbol
kdm2bb
Name
(RefSeq) lysine (K)-specific demethylase 2Bb isoform X1
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
omc
Onychostoma macrolepis
Pathway
omc03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
131548076 (kdm2bb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omc03000
]
131548076 (kdm2bb)
04121 Ubiquitin system [BR:
omc04121
]
131548076 (kdm2bb)
03036 Chromosome and associated proteins [BR:
omc03036
]
131548076 (kdm2bb)
Enzymes [BR:
omc01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
131548076 (kdm2bb)
Transcription factors [BR:
omc03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
131548076 (kdm2bb)
Ubiquitin system [BR:
omc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
131548076 (kdm2bb)
Chromosome and associated proteins [BR:
omc03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
131548076 (kdm2bb)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
131548076 (kdm2bb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
JHD
F-box-like
F-box
JmjC
Cupin_8
LRR_4
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
131548076
NCBI-ProteinID:
XP_058645018
LinkDB
All DBs
Position
10:complement(21035623..21060680)
Genome browser
AA seq
1287 aa
AA seq
DB search
MEACAESGRKLRSICRRMYDENEDLSDVEEITNIRGFNLDDKLESNSYNNEFVQYMEGKD
FTYEYVQREALRSPLVFKAKDGLGIRMPDPEFTVSEIKGLVGSRRAVDVMDVSTQKGSEM
SMAQFVRYYETPEDERDKLFNVISLEFSHTKLENLIKRPTVVDLVDWVDNMWPRHLKQKQ
TEATNVMSEMKYPKVQRYCLMSVKGCFTDFHIDFGGTSVWYHVFKGRKVFWLIPPSPHNL
SLFEDWVLSGKQSDIFLGDRSDGCQRVELKQGYTFFIPSGWIHAVYTPEDTLVFGGNILH
SFNIPMQLTVYEIENRTKVHSKFRYPFFYEMCWYVLERYVNCLTRRSYLSLEFRVHAAEP
KLVTESLVSAPRLDMEEDSCETRLERTEETTQPSSAVPPYQTFKSPANDSEDSFKSLPSE
CPKTPSGSPGTEHSGKWTHLTEFELNGLKALVEKLESLPETKKCVPEGIEDPQALLDDVK
VVLKEHADDNPKLAITGSPIVCWPKKTGKSRPLNRPKTKMGSSPSAAPGSTAGGVKLSSS
RGSSSARRRRTRCRKCEACMRKECGECHFCKDMKKFGGPGRMKQSCIMRQCIAPVLPHTA
VCLVCGEAGKEDTVENEEDKFNMMLMECSICNEILHPGCLKEKDSGGVVNDELPNCWECP
KCNHAGKTGKVTKQKRGPGFKYASNLPGSLLKDQRMNRDVKEEQESNMSTESYTSTVSPV
MKKKTEREDNPTCKSEDAFKKRSPKLEENPLRKKRKLFEKDSDSDSNVKKKKKRSKPEDL
STSNVLGQIKTEREDDEEYDENNRQELERRAFSFVPSEEEDGDDEEEEEEEEETMKEKSS
REENGKLVNKTSTAWEGDQSQGSFTQAGPSSNSGVDTQLRSHRKTKRKPRLPNKELSKEL
SKQLNQEIQKTEDCLAHQNGRAVKTEPDSDGEDRKPLRNGSSHLRDWLGPKRELNGSLRE
QVPVNWIRTTPTPVIRPTPCRSPPKYVQMERHVIRPPPISPPPDGLPLDDGKNHVMRREV
WMAVFSHLTHQDLCVCMRVCKTWNRWCCDKRLWTKIDLNRCKSITPLMLSGIIRRQPVSL
DLSWTNISKKQLSWLINRLPGLRILLLAGCSWAAVSALCTSSCPLLRTLDVQWVEGLKDN
QIRDLLSPPTDNRPGQLDSRSKLRNVENLCLAGLDITDTSLKLIIKHMPSLSQLDLSYCN
HITDQSVNILTAAGTTTRDSLTHINLSVCNKVTDLSLTYFKRCGNICHIDLRYCKQVTKE
GCEQFIAEMSVSVQFRLIEEKLLSKLS
NT seq
3864 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgtgtgcggaatccggacgcaaactgcgctcgatctgcagaaggatgtacgac
gagaacgaggacttgtcagatgtggaggaaatcacaaacatcaggggcttcaatttggat
gacaaacttgagagcaattcatacaacaacgaatttgttcagtatatggagggaaaagat
tttacttatgaatatgttcaaagagaggcactgcgatctccgctcgtatttaaagccaaa
gatggactgggaattaggatgccggatccagaatttactgtaagtgaaatcaagggtttg
gttggcagcaggcgggctgttgacgtgatggacgttagcacacagaagggctcagagatg
agcatggcacagtttgtccgctactatgagacacccgaggatgaacgtgacaagctgttc
aacgtcatcagcctggagttcagtcacaccaaactggagaatttgatcaagagacccact
gtggtggatctggtggattgggtggacaatatgtggccgcggcatcttaaacagaaacaa
accgaagccacaaatgtcatgtctgagatgaaatatcccaaagttcagagatactgtctg
atgagtgtaaaaggctgtttcactgacttccacatcgactttggcggcacatcggtatgg
taccatgtcttcaaaggaagaaaggtcttctggctgattcctccaagcccacacaatctg
tctctgtttgaggactgggtgctgtcaggcaaacagagcgatatcttcctgggtgaccgt
tcagacggctgccagcgagtagagctgaaacagggctacacgttcttcatcccttcaggt
tggatccatgccgtctacactccagaagacaccctggtgtttggcgggaatattttacac
agttttaacattcccatgcagctcactgtctacgaaattgagaacagaacaaaggtgcac
tccaaattccgctaccctttcttctatgagatgtgctggtatgtgttggagaggtacgtg
aactgcttgaccagacgttcgtacctcagcctggagttccgcgttcacgctgctgaaccc
aagcttgtaaccgagagtctcgtctctgctcctcggctggacatggaggaagactcatgt
gagacacggttagagaggacagaggagacgacccagccctcctcagctgtccctccctat
cagaccttcaaatccccggccaatgattctgaagacagcttcaagtccctgccttcagag
tgtcccaagactccgtctggctcacctggaacagaacattccggcaaatggacccacttg
acagagtttgagctaaatggactcaaggccttggtggagaagctggaatcccttccggag
acaaagaaatgcgttccagagggcatcgaggatccacaagcactgctagatgacgtgaag
gttgtgttaaaggaacatgcagatgacaatccaaagttggccatcactggttctcctatt
gtatgctggccgaagaagacaggcaagtcacggccgcttaatcggccaaaaacaaagatg
ggctcgtctccatcggctgctccaggctcgacagcgggaggagtgaagctctcgtccagt
cgcggttcatctagtgcccggcgcagacggacacgctgcagaaagtgcgaggcatgtatg
cgcaaagagtgtggcgagtgccacttctgcaaagacatgaagaagtttggtggaccaggc
cgcatgaagcagtcctgtatcatgagacaatgcatagcgcctgttttacctcacactgct
gtgtgtctggtgtgcggagaggctgggaaagaagacacagtagagaatgaggaggacaag
ttcaacatgatgcttatggagtgctctatctgcaacgagatcctccatccaggatgcttg
aaggagaaggattctggcggtgttgtaaatgacgagttgccaaattgctgggagtgtccg
aaatgcaatcatgctggaaagacagggaaagtcacaaagcaaaaaagaggcccagggttt
aagtacgcctctaatctccctggctctctgctcaaagaccagcgaatgaaccgggatgta
aaggaagagcaagaatcaaacatgtctacagagtcctacacctctactgtttcacctgtc
atgaagaagaagacagaacgagaggacaatcctacctgcaagtcagaagacgcctttaag
aaacgttctcccaaattggaggaaaacccactccgcaagaagagaaaactctttgaaaag
gactcagactcagattccaatgtcaagaaaaagaagaagcgctcaaagcctgaagatctc
tcaacctctaatgtcctgggacagataaagacagaaagagaggatgatgaggagtatgat
gagaataacagacaagaattggagaggagagccttcagttttgtgccctcagaagaagag
gatggagatgatgaagaggaggaagaagaagaagaggagacaatgaaggagaaaagtagc
cgagaggagaatgggaagcttgtgaacaagacctccactgcatgggaaggcgaccaatca
cagggcagttttacccaggcagggcccagcagcaactcgggtgttgatacacagttgagg
agccatcgaaaaaccaaacgcaaacctcgcttgcccaacaaagaactgagcaaagaacta
agcaaacaacttaatcaggagatccagaagacagaggattgtctggctcatcaaaatggc
agggcggtgaagacagaaccagatagtgatggagaagatagaaaaccactgaggaatggc
agcagccatctgagagactggctgggacctaagcgggaactaaacggatccttgcgagag
caggtcccggttaactggatcaggactacacctaccccagtcattcggccaacaccttgc
cgctctcctccgaaatatgttcagatggagcggcacgttattcgcccccctccgatcagc
ccccctccggatgggctgcccctagatgacgggaagaatcacgtcatgcggagagaggtg
tggatggcagtgttcagccacctcacacaccaagacctctgtgtctgcatgcgggtctgc
aagacctggaacagatggtgttgtgataaaagactgtggaccaagatcgatctgaaccgg
tgcaagtcaatcactccactcatgctgagtggcattatccgcagacagccagtctccctg
gacctgagttggaccaacatctccaagaagcagctcagctggctaatcaacagattacct
ggtctgaggattcttttgctggcaggctgttcgtgggcagctgtatcagctctatgcaca
tccagttgtcctttgctaagaactttagatgtgcagtgggtagagggactcaaggacaac
cagataagagacttactctccccgccgacagacaacagaccaggtcagttggacagtaga
agtaaactgaggaacgtggagaatctctgtctagctggtctggacatcacagatacgtcc
ctgaagctgatcataaaacatatgccttcactgtcccaattggaccttagttactgtaac
cacatcaccgaccagagtgtgaatatcctcacggcagccggcaccacgaccagagactct
cttactcacatcaacctttcagtttgtaacaaagttacagacctgtcgttgacctacttc
aagcgctgcggaaacatttgtcacatcgacctgcggtactgcaaacaggtgaccaaagag
ggttgtgagcagttcattgcagagatgtccgtcagcgtgcagttcagactgattgaagaa
aaactactgagcaaactgagctag
DBGET
integrated database retrieval system
