Onychostoma macrolepis: 131552781
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Entry
131552781 CDS
T09350
Symbol
c9orf72
Name
(RefSeq) guanine nucleotide exchange factor C9orf72 homolog
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
omc
Onychostoma macrolepis
Pathway
omc04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
131552781 (c9orf72)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omc04131
]
131552781 (c9orf72)
Membrane trafficking [BR:
omc04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
131552781 (c9orf72)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C9orf72-like
Motif
Other DBs
NCBI-GeneID:
131552781
NCBI-ProteinID:
XP_058652858
LinkDB
All DBs
Position
13:complement(11801456..11810467)
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AA seq
462 aa
AA seq
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MSAACPPQSPGVAKTEVLVEDWCPVLAATFAYWDNILGPRVQHIWAPKGQGLSLLSDGEV
TFLANHTLNGEILRSAECGAVDVKFFVLAEKGVIIVSLIFDGELKGDKNTCALSIILPQS
ELSFYLPLHSVCVERLKHIIRKGRICMQKGYNIISVLSSEIVPIMELLTSMKKHSVPEEV
DLKDTVLNDDDIGDSCHEDFLHKAISSHLQTCGCSMVVGSNPEKVNKIVLTLCLFLTPAE
RKCSRLCHPDGSFKYDTGLFVQGLLKDSTGSFVLPYRQVLYSPYPTTHIDVDINTVKQMP
PCHEHTYHQRRYMRAELSAYWKAASEDDISSDNLINAQDSYTPDLNIFQDVMHKDTLVKS
FIDEVFLLKPGLSLRSVYLSHFLLLMHRKALTLLRYIEDETQKGKKPFRSLRNLKTDLDL
TVEGDLNIIMAMAEKLRAGLHSFVFGKSFLTSVQERDLLINF
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcagcctgtcccccgcagtctcctggtgtggctaagactgaagtgctggtagag
gactggtgtcccgtgctggctgcaacctttgcttactgggacaacatcctgggacctcgt
gtacagcacatctgggcccccaaaggtcaggggttgtcgctgctcagtgatggagaggtc
acgtttctggccaatcacacgctgaacggcgagattttgcgaagcgcggagtgtggcgca
gtggatgtgaagttcttcgtcttggcagaaaagggagtcatcatagtctcgctcattttt
gacggagaactcaagggtgataagaatacttgcgcgctgtcaatcatcctgccgcagtca
gagctaagcttttacctgccactgcacagtgtgtgtgtagagagactcaaacacatcatc
cgcaagggacgcatctgcatgcagaagggttacaacataatctctgtgttgtcatctgag
attgttcccataatggagcttcttacctccatgaagaaacacagtgtaccagaggaagtg
gatctaaaggacactgtgctcaatgatgatgatattggagacagctgtcacgaagacttt
ttacacaaggctatcagctctcatcttcagacctgcggctgttccatggtggttggcagc
aatcctgagaaagtcaataagatcgtgctcacgctgtgcctcttcctcacccctgcggag
agaaagtgctctcgactatgtcaccccgacggctcatttaaatatgacactggcctcttt
gttcaaggcctccttaaggactccacaggcagcttcgtgttgccctaccggcaggtgctc
tactctccgtaccccaccacccacatcgacgtggacattaacacggtcaagcagatgcca
ccctgccatgagcacacgtatcatcagcggcgctacatgcgtgctgagctcagtgcctac
tggaaagccgccagcgaggatgacatcagttctgacaacctcatcaatgcccaggactcc
tacacaccagacttaaatatatttcaagacgtgatgcacaaagacacacttgtgaagtct
ttcatagatgaggtgtttcttttgaaaccaggtctgtctctgcggagtgtgtatttgtcc
cacttccttctcttgatgcacaggaaggccctgacactgctcagatatattgaggatgag
acgcagaagggcaaaaaacctttcagatctctacgcaacttgaaaactgatttggactta
acggtggagggtgacctgaatatcatcatggcgatggcggagaagctccgggcaggcctt
cactcctttgtttttgggaagtctttccttaccagtgtgcaggaacgtgacctcctcatt
aacttctga
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