Oryzias melastigma (Indian medaka): 112136529
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Entry
112136529 CDS
T07439
Symbol
rapgef5a
Name
(RefSeq) rap guanine nucleotide exchange factor 5 isoform X1
KO
K08019
Rap guanine nucleotide exchange factor 5
Organism
oml
Oryzias melastigma (Indian medaka)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
DEP
RasGEF_N
Motif
Other DBs
NCBI-GeneID:
112136529
NCBI-ProteinID:
XP_024114048
Ensembl:
ENSOMEG00000015576
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Position
LG11:complement(9620268..9676648)
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AA seq
912 aa
AA seq
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MEDTEPAEDGVLAGLRWNRGARDQTQLKHKIRDLPGLLKHGLHLRKKSVSVSDAPSFRVC
VDQSPDTIPGPSTGPTVHKSCSQSFPCAGRAVRNAFLSHGPYPAKDKIHLARIIRRSYVG
VELVQWLCEQCVCVRYRTAAVHVWQVLLELGVLLSVDQRVVFSDSNSYYQFSFEECDSPS
CEFRLNEADWPEAVKLLLQLAPYVQFRSGGGTNSPSEEDSEGNRDICSEILQIKALERLT
STVQSELAAALARKTRKALSEQDSDTTEERQQESCTPSEESSPLGGVCSLRDSGNSSSGG
GGSGGTGSVCCREELTSRLGLEAVQRLAKDGCRILQNHNYRISDRNQAEALGRVCLKERG
RDVLVLQRVTSSLTSPSDRPSPTSSSGGGLRQEDSNKRYVVVSGTPLKILEHLLSDLRLD
DQRGAQENRESEMLLDDFLLTYLVFMSTHDLCQALLGHYGGTRCRGQEEGKDALFRKRKV
LQLVSHWSRLYKDFLKEEEHIRSFMKTLYRCVLEDLYEFPSLEKDLKEFQKLLRRRHTVD
DCPSNQKSKQMHQQLSLKENCLHLRTPQTENKEVICCVYVSADSYLSVHTHPSLEAHELL
RIVGMKMDRAEEDMVLAVVLQTGERRMLQPSDCVYSESMTPNGKLVACRRDLNEILPPLA
DSAELSKRPVRLLGINTWDVATALTHVDWTLFKSIHEQELVYYTLSRPPGSGHTAALSFL
LQRCNEVQQWVMSEVLMCVSLNKRVQLLKKFIKIAAHCKAQRNLNSAFAIIMGLNTAAVS
RLNQTWEKCPGKFKKLFSELELITDPSLNHKAYREAFKRMKPPKIPFMPLLLKDITFIHE
GNKTFHDNLVNFEKLHMIADTVRMIRHCQSDQPGNEVIGVDSPEVRASVHCLHIIDNQQT
LFKLSHKLEPRA
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atggaggacacggagcccgcagaggacggcgtgctcgcggggctgcggtggaaccggggc
gcgcgggaccaaactcagctgaaacacaaaatccgggatctgccggggctgctgaagcac
ggactgcacctgcggaagaagagcgtgagtgtttctgacgcaccgtccttccgtgtttgt
gtagaccaatcacctgacaccatccctggaccaagtacggggccgacagtacacaagtct
tgctcccagagcttcccgtgtgctggtcgagccgtgaggaacgccttcctctctcatgga
ccatacccggccaaagacaagatacatctagccagaatcatcaggcgcagctatgtggga
gtggagctggtgcagtggctgtgtgagcagtgtgtctgtgtgcgctatcggactgctgct
gtgcatgtctggcaggtgctgctggagctgggagtcctgctgtctgttgaccagcgggtg
gtgttttctgactccaactcttactaccagttcagttttgaggagtgcgactctccgtct
tgtgagtttcgtctcaatgaggcggactggccggaggctgtgaaacttcttctacaactt
gccccctatgtccagtttcgctccggtggcgggaccaatagtccgtcagaggaagactct
gagggcaacagagacatctgcagtgagatccttcagattaaagctctggagaggctcacc
tccacggtacaaagcgagttggcagcagctctcgccagaaagactcgtaaagctttatca
gagcaggactctgacacaacagaggaacgtcagcaggagtcgtgcacgcccagcgaggag
agcagtccgctgggtggggtgtgttcgttgcgggacagcggcaacagcagcagtggtggt
ggcggcagtgggggaacggggtcggtttgctgccgtgaagaactcaccagccgactgggg
ctggaggcggtccagcggctggcgaaggatggctgtcggatcctgcagaaccacaactac
cggatatctgacaggaatcaagcggaggcgctggggagggtttgcctcaaagagagggga
cgagacgtgttggtgttgcagcgggtgacgtcctcgctgacatcgccctcggaccgcccc
tcgcctacgtcgtcgtcagggggcgggctcaggcaggaggactccaacaagaggtatgtg
gtggtatccggaaccccactgaagattttggagcatctgcttagcgacctgcgactcgat
gaccaaagaggggcacaagagaacagggagagcgaaatgctgctggatgacttcctgctg
acctacctggtgttcatgtccactcatgacctctgccaggcgctgctgggacattatggc
ggcacccgctgcagaggccaagaagagggcaaagacgccctctttaggaagcgcaaggta
ctgcagctggtctcccactggagtcggctttataaggacttcctgaaagaagaggagcac
attcggagttttatgaagactctgtacaggtgtgttttggaggatctttatgagtttccc
tcgctggagaaagatctgaaggagtttcaaaaacttttacgccgcagacacactgtggat
gactgcccttcaaaccaaaagagcaaacaaatgcatcagcagttgagtttgaaagaaaac
tgtttgcaccttcgcactccccagacggaaaataaagaggtgatatgttgcgtgtatgtg
agtgctgattcctacctgagtgtccacacacacccctcactggaggcgcatgagttgtta
cggattgtggggatgaagatggacagagcagaggaagacatggtgcttgctgttgtgttg
caaactggagagcgaaggatgctgcagccaagtgactgtgtgtattcagagtcaatgacc
ccaaacggaaagcttgtggcctgtcgcagggatctcaacgagattttgcctcctttagcc
gacagtgctgagttgagcaagaggccggtccgactcttgggcatcaacacttgggacgtg
gcaacggcgctcacacatgtggactggacgctcttcaaatccatccatgagcaggagctg
gtgtactacactctcagccgccctcccggcagcggccacacggcggcgctctccttcctg
ctgcagcgctgcaacgaggtgcagcagtgggtcatgtctgaggtgctcatgtgcgtgtcc
ctcaacaagagagtacagctgctcaagaagttcatcaaaatcgctgctcactgtaaagcc
caaagaaatctgaattctgcatttgccatcatcatgggtctcaacacagctgctgtcagt
cgacttaaccaaacatgggagaaatgtcccggcaagttcaagaagcttttttctgagttg
gagctcatcacggatccatctcttaaccacaaagcttacagagaggcattcaaaaggatg
aaacctccgaagattccctttatgcctcttcttctgaaagatatcacttttattcatgag
ggaaacaagaccttccacgacaacctggtcaactttgaaaaactgcacatgattgcagac
acagtgagaatgattcgccactgccaaagtgatcaaccaggtaacgaggtgattggggtg
gacagtccggaagtgcgagcgagcgtgcactgtctgcacatcatcgacaatcagcagacg
ctcttcaaactgtcgcacaagctggagccgcgcgcctaa
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