Oryzias melastigma (Indian medaka): 112137545
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Entry
112137545 CDS
T07439
Symbol
cxcl12b
Name
(RefSeq) chemokine (C-X-C motif) ligand 12b (stromal cell-derived factor 1) isoform X1
KO
K10031
C-X-C motif chemokine 12
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04060
Cytokine-cytokine receptor interaction
oml04672
Intestinal immune network for IgA production
oml04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
112137545 (cxcl12b)
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
112137545 (cxcl12b)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
112137545 (cxcl12b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
oml04052
]
112137545 (cxcl12b)
00536 Glycosaminoglycan binding proteins [BR:
oml00536
]
112137545 (cxcl12b)
Cytokines and neuropeptides [BR:
oml04052
]
Cytokines
Chemokines
112137545 (cxcl12b)
Glycosaminoglycan binding proteins [BR:
oml00536
]
Heparan sulfate / Heparin
Chemokines
112137545 (cxcl12b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IL8
Motif
Other DBs
NCBI-GeneID:
112137545
NCBI-ProteinID:
XP_024115676
Ensembl:
ENSOMEG00000005338
LinkDB
All DBs
Position
LG1:120594..139202
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AA seq
102 aa
AA seq
DB search
MDVKLLALMALLIVATHTPTSKAKPISLVERCWCRSTLNTVPQRSIKELKFLHTPNCPFQ
VIAKLKNNREVCINPETKWLQQYLKNAINKVKKSKRRNGQKI
NT seq
309 nt
NT seq
+upstream
nt +downstream
nt
atggacgtcaagctgctcgcactgatggccctgctgatcgtggccacacacactcccacc
tccaaagccaaacccatcagcctggttgaacggtgctggtgtcgctccacgctcaacact
gttcctcagcgcagcatcaaagagctgaagttcctccacacacccaactgccccttccaa
gtcattgctaaactgaagaacaacagagaagtttgcatcaacccagagaccaagtggctg
cagcagtacttaaagaatgccatcaacaaggtgaagaaatccaagagacgcaatggccag
aagatctag
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