KEGG   Oryzias melastigma (Indian medaka): 112137654
Entry
112137654         CDS       T07439                                 
Name
(RefSeq) tropomyosin alpha-3 chain
  KO
K09290  tropomyosin 3
Organism
oml  Oryzias melastigma (Indian medaka)
Pathway
oml04260  Cardiac muscle contraction
oml04261  Adrenergic signaling in cardiomyocytes
oml04814  Motor proteins
oml04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:oml00001]
 09140 Cellular Processes
  09142 Cell motility
   04814 Motor proteins
    112137654
   04820 Cytoskeleton in muscle cells
    112137654
 09150 Organismal Systems
  09153 Circulatory system
   04260 Cardiac muscle contraction
    112137654
   04261 Adrenergic signaling in cardiomyocytes
    112137654
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:oml04812]
    112137654
Cytoskeleton proteins [BR:oml04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Tropomyosins
     112137654
SSDB
Motif
Pfam: Tropomyosin Laminin_II CENP-F_leu_zip TMF_DNA_bd XhlA Crescentin PUMA_CC TMP_N DUF16 MscS_porin DUF3450 Lebercilin Asd-4 ATG16 ODAD1_CC DUF745 CLZ Exonuc_VII_L Fib_alpha Fez1 DUF1664 FH2 BicD ADIP FPP Sec10_N Use1 DUF7179 SlyX
Other DBs
NCBI-GeneID: 112137654
NCBI-ProteinID: XP_036067527
LinkDB
Position
LG1:9017449..9018355
AA seq 146 aa
MKVIENRAMKDEEKMEVQEMQLKEAKHIAEEADRKYEEVARKLVILESDLERAEERAELA
EMKCSELEDELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKVLTDKLKEAETRAEFAERSV
AKLEKTIDDLEDELYAQKLKYKAISE
NT seq 438 nt   +upstreamnt  +downstreamnt
atgaaggtgatcgagaaccgagccatgaaagacgaggagaagatggaggttcaggaaatg
cagctgaaagaagccaaacacatcgctgaggaggctgaccgtaaatatgaggaggttgct
cgtaagctggtgatcctggagagtgatctggaaagggcagaagagcgggcagaactagct
gaaatgaagtgcagtgaactggaggacgagctgaagaacgtgaccaacaacctgaagtct
ctggaggctcaggcagagaagtactcgcaaaaggaagacaagtatgaggaggagatcaag
gttctcacagacaagctcaaggaggctgagacccgtgctgagtttgctgagagatcagtc
gccaagcttgagaagaccattgatgaccttgaggatgagctgtatgcccagaagctgaag
tacaaggccatcagcgag

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