Oryzias melastigma (Indian medaka): 112137690
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Entry
112137690 CDS
T07439
Symbol
prdm6
Name
(RefSeq) putative histone-lysine N-methyltransferase PRDM6 isoform X1
KO
K20795
[histone H4]-lysine20 N-methyltransferase PRDM6 [EC:
2.1.1.361
]
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml00310
Lysine degradation
oml01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
112137690 (prdm6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oml03000
]
112137690 (prdm6)
03036 Chromosome and associated proteins [BR:
oml03036
]
112137690 (prdm6)
Enzymes [BR:
oml01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.361 [histone H4]-lysine20 N-methyltransferase
112137690 (prdm6)
Transcription factors [BR:
oml03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
112137690 (prdm6)
Chromosome and associated proteins [BR:
oml03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
112137690 (prdm6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-C2H2_4
zf-H2C2_2
SET
zf-C2H2_11
Zap1_zf1
zf-C2H2_15
zf-C2H2_jaz
zf-C2HC_2
Motif
Other DBs
NCBI-GeneID:
112137690
NCBI-ProteinID:
XP_036069649
Ensembl:
ENSOMEG00000003651
LinkDB
All DBs
Position
LG9:13048491..13119040
Genome browser
AA seq
340 aa
AA seq
DB search
MEKLGGVKEKKHLIILLLLSRQMFSLTSKPSLFVFQIYDAEGTLLHFIDGNDPSKSSWMR
YIRCARHCGEQNMMVVQYRSCIFYRACVDIPRGTELLVWYNDSYTSFFGIPLQCIAQDEN
LNVPATVMEAMSRQESLQSFSKNAKPSSSSSSSSAIPTLIRSMVFPHSPCSRSFSLLDKV
GAQSDSSFGHLGSKNQRVLASPTSTSQLSSEFSDWHLWKCGQCFKTFTQRILLQMHVCPQ
NPDRPYQCGHCSQSFSQPSELRNHVVTHSSDRPFKCGYCGRAFAGATTLNNHIRTHTGEK
PFKCERCDRSFTQATQLSRHQRLPNECKPMNESSESIEVD
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggagaaactgggaggggttaaagagaagaaacatcttattatactgttgttgttgtca
cggcagatgttttctcttacaagcaaaccctcactctttgtctttcagatttatgacgca
gagggaacattactgcactttatcgatggaaatgatcccagtaagtccagttggatgagg
tacatccgctgtgccagacactgtggagagcagaacatgatggtggtgcagtacaggtcc
tgcatcttctacagagcgtgtgtggacattcccagaggaacggagctgctggtttggtac
aatgactcctacacctccttctttggcatcccgctgcagtgcatcgcccaggacgaaaac
ttgaacgttcctgccacagtgatggaagccatgagcagacaagagtccctgcagagcttc
agcaaaaacgccaagccgtcttcctcctcgtcgtcttcctctgcgatccccaccctcatc
cgctccatggtcttcccccactccccctgctctcggagtttctctctgctggacaaggtc
ggagctcagtcggactccagtttcggtcatttagggtccaagaaccagcgagtcctggcg
agcccgacctccaccagccagctgagcagtgagttcagcgactggcatttgtggaagtgt
gggcagtgcttcaagaccttcacccagaggattctgctgcagatgcatgtctgcccacag
aatcccgacaggccctaccagtgtggccattgctcccagtccttctctcagccgtccgag
ctgaggaaccatgtggtgacgcactccagtgaccggcccttcaagtgtggatactgcggg
cgggcgttcgccggcgccaccacactcaacaaccacatccgcacgcacaccggagagaag
ccgttcaagtgcgagcgttgcgaccgcagcttcacacaggccactcagctcagccgccat
caacgacttcccaacgagtgcaaaccgatgaacgagagcagcgagtccatcgaggtggat
taa
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