KEGG   Oryzias melastigma (Indian medaka): 112138173
Entry
112138173         CDS       T07439                                 
Name
(RefSeq) actin, cytoplasmic 2
  KO
K05692  actin beta/gamma 1
Organism
oml  Oryzias melastigma (Indian medaka)
Pathway
oml03082  ATP-dependent chromatin remodeling
oml04145  Phagosome
oml04210  Apoptosis
oml04510  Focal adhesion
oml04520  Adherens junction
oml04530  Tight junction
oml04810  Regulation of actin cytoskeleton
oml04814  Motor proteins
oml04820  Cytoskeleton in muscle cells
oml05100  Bacterial invasion of epithelial cells
oml05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:oml00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    112138173
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    112138173
  09143 Cell growth and death
   04210 Apoptosis
    112138173
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    112138173
   04520 Adherens junction
    112138173
   04530 Tight junction
    112138173
  09142 Cell motility
   04814 Motor proteins
    112138173
   04820 Cytoskeleton in muscle cells
    112138173
   04810 Regulation of actin cytoskeleton
    112138173
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    112138173
   05100 Bacterial invasion of epithelial cells
    112138173
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:oml03021]
    112138173
   03019 Messenger RNA biogenesis [BR:oml03019]
    112138173
   03036 Chromosome and associated proteins [BR:oml03036]
    112138173
   03029 Mitochondrial biogenesis [BR:oml03029]
    112138173
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:oml04812]
    112138173
   04147 Exosome [BR:oml04147]
    112138173
Transcription machinery [BR:oml03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     112138173
Messenger RNA biogenesis [BR:oml03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     112138173
Chromosome and associated proteins [BR:oml03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TIP60 complex
     112138173
    NuA4 complex
     112138173
  Chromatin remodeling factors
   BAF complex
    112138173
   PBAF complex
    112138173
   GBAF(ncBAF) complex
    112138173
   SWR1 complex
    112138173
Mitochondrial biogenesis [BR:oml03029]
 Mitochondrial quality control factors
  Mitochondrial dynamics
   Actin cytoskeleton organization
    112138173
Cytoskeleton proteins [BR:oml04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actins
    Actins
     112138173
Exosome [BR:oml04147]
 Exosomal proteins
  Proteins found in most exosomes
   112138173
SSDB
Motif
Pfam: Actin DUF6581
Other DBs
NCBI-GeneID: 112138173
NCBI-ProteinID: XP_024116512
Ensembl: ENSOMEG00000013832
UniProt: A0A3B3C3C2
LinkDB
Position
LG9:17119057..17121820
AA seq 375 aa
MEEDISALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
QIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYALPHAILRLDL
AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMNTAASSSSLEKSY
ELPDGQVITIGNERFRCPEALFQPSFLGMESAGIHETTFNSIMKCDVDIRKDLYANTVLS
GGTTMYPGIADRMQKEITALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
EYDESGPSIVHRKCF
NT seq 1128 nt   +upstreamnt  +downstreamnt
atggaagaggatatctctgctctcgtggtcgacaatggatccggcatgtgcaaggctggt
tttgctggggatgatgccccccgggctgtcttcccatccatcgtgggccgcccccgacac
cagggtgtgatggtgggaatgggacagaaggacagctacgttggagatgaggctcagagc
aagaggggtatcctgaccctgaagtaccccattgagcacggcatcgtcaccaactgggat
gacatggagaagatctggcatcacaccttctacaacgagctgagagtggcacctgaagag
catccagtcctgctgaccgaggctcccctcaaccccaaagccaacagggagaagatgaca
cagatcatgtttgaaaccttcaactctcctgccatgtatgtggccatccaggctgtgctg
tccctatacgcctctggtcgtaccacaggaattgtgatggactctggcgacggtgtcagc
cacactgtgcccatctatgagggctatgctctgcctcatgctatcctccgtctggatctg
gctggcagagatttgacagattacctgatgaagatcctgacggagagaggctacagcttc
accaccacagctgagcgtgaaattgtgcgtgacatcaaggagaagctctgctatgtggca
ctggactttgagcaggagatgaatacggctgcttcctcttcctccctggagaagagctac
gagcttcctgacgggcaggtcatcacaatcgggaacgagaggttccgctgccctgaggcg
ctcttccagccctcattccttggtatggaatctgctggcattcatgagacgaccttcaac
agtatcatgaagtgtgacgtagacatccgtaaggacctgtatgctaacacggtgctgtct
ggaggaaccaccatgtaccctggaattgctgaccgcatgcaaaaggagatcactgctctg
gccccacccaccatgaagattaagatcattgcccctccagagaggaagtactctgtctgg
attggtggctccatcctggcttccctgtccaccttccagcagatgtggatcagcaagcag
gagtacgatgagtccggtccctccattgtccaccgcaagtgtttctaa

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