Oryzias melastigma (Indian medaka): 112138173
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Entry
112138173 CDS
T07439
Name
(RefSeq) actin, cytoplasmic 2
KO
K05692
actin beta/gamma 1
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03082
ATP-dependent chromatin remodeling
oml04145
Phagosome
oml04210
Apoptosis
oml04510
Focal adhesion
oml04520
Adherens junction
oml04530
Tight junction
oml04810
Regulation of actin cytoskeleton
oml04814
Motor proteins
oml04820
Cytoskeleton in muscle cells
oml05100
Bacterial invasion of epithelial cells
oml05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
112138173
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
112138173
09143 Cell growth and death
04210 Apoptosis
112138173
09144 Cellular community - eukaryotes
04510 Focal adhesion
112138173
04520 Adherens junction
112138173
04530 Tight junction
112138173
09142 Cell motility
04814 Motor proteins
112138173
04820 Cytoskeleton in muscle cells
112138173
04810 Regulation of actin cytoskeleton
112138173
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
112138173
05100 Bacterial invasion of epithelial cells
112138173
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oml03021
]
112138173
03019 Messenger RNA biogenesis [BR:
oml03019
]
112138173
03036 Chromosome and associated proteins [BR:
oml03036
]
112138173
03029 Mitochondrial biogenesis [BR:
oml03029
]
112138173
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oml04812
]
112138173
04147 Exosome [BR:
oml04147
]
112138173
Transcription machinery [BR:
oml03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
112138173
Messenger RNA biogenesis [BR:
oml03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
112138173
Chromosome and associated proteins [BR:
oml03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
112138173
NuA4 complex
112138173
Chromatin remodeling factors
BAF complex
112138173
PBAF complex
112138173
GBAF(ncBAF) complex
112138173
SWR1 complex
112138173
Mitochondrial biogenesis [BR:
oml03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Actin cytoskeleton organization
112138173
Cytoskeleton proteins [BR:
oml04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actins
Actins
112138173
Exosome [BR:
oml04147
]
Exosomal proteins
Proteins found in most exosomes
112138173
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
DUF6581
Motif
Other DBs
NCBI-GeneID:
112138173
NCBI-ProteinID:
XP_024116512
Ensembl:
ENSOMEG00000013832
UniProt:
A0A3B3C3C2
LinkDB
All DBs
Position
LG9:17119057..17121820
Genome browser
AA seq
375 aa
AA seq
DB search
MEEDISALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
QIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYALPHAILRLDL
AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMNTAASSSSLEKSY
ELPDGQVITIGNERFRCPEALFQPSFLGMESAGIHETTFNSIMKCDVDIRKDLYANTVLS
GGTTMYPGIADRMQKEITALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
EYDESGPSIVHRKCF
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggaagaggatatctctgctctcgtggtcgacaatggatccggcatgtgcaaggctggt
tttgctggggatgatgccccccgggctgtcttcccatccatcgtgggccgcccccgacac
cagggtgtgatggtgggaatgggacagaaggacagctacgttggagatgaggctcagagc
aagaggggtatcctgaccctgaagtaccccattgagcacggcatcgtcaccaactgggat
gacatggagaagatctggcatcacaccttctacaacgagctgagagtggcacctgaagag
catccagtcctgctgaccgaggctcccctcaaccccaaagccaacagggagaagatgaca
cagatcatgtttgaaaccttcaactctcctgccatgtatgtggccatccaggctgtgctg
tccctatacgcctctggtcgtaccacaggaattgtgatggactctggcgacggtgtcagc
cacactgtgcccatctatgagggctatgctctgcctcatgctatcctccgtctggatctg
gctggcagagatttgacagattacctgatgaagatcctgacggagagaggctacagcttc
accaccacagctgagcgtgaaattgtgcgtgacatcaaggagaagctctgctatgtggca
ctggactttgagcaggagatgaatacggctgcttcctcttcctccctggagaagagctac
gagcttcctgacgggcaggtcatcacaatcgggaacgagaggttccgctgccctgaggcg
ctcttccagccctcattccttggtatggaatctgctggcattcatgagacgaccttcaac
agtatcatgaagtgtgacgtagacatccgtaaggacctgtatgctaacacggtgctgtct
ggaggaaccaccatgtaccctggaattgctgaccgcatgcaaaaggagatcactgctctg
gccccacccaccatgaagattaagatcattgcccctccagagaggaagtactctgtctgg
attggtggctccatcctggcttccctgtccaccttccagcagatgtggatcagcaagcag
gagtacgatgagtccggtccctccattgtccaccgcaagtgtttctaa
DBGET
integrated database retrieval system