Oryzias melastigma (Indian medaka): 112138802
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Entry
112138802 CDS
T07439
Name
(RefSeq) protocadherin gamma-C5-like
KO
K16497
protocadherin gamma subfamily C
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oml04515
]
112138802
Cell adhesion molecules [BR:
oml04515
]
Cadherins
Protocadherins
112138802
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
112138802
NCBI-ProteinID:
XP_024117208
LinkDB
All DBs
Position
Unknown
AA seq
843 aa
AA seq
DB search
MGNAVYLIALDNIYSGTGMTKTKGYRARGWQALWWHHFFLLWSTIDAQTRYSIPEELKHG
SVVGNLAKDLGLTLTEISERALRVASESGEQYFRVDAGRGELLVNDRIDREALCGQSASC
VLPLQLVLEKPLSLHRIEVEIQDINDNPPKFYTEELFLNISETAVVGTRFPLESAEDSDV
GGNSVKSYTLTKNECFTLKMKEVEDGKTVPELVLEKSLDREIKAVHQLRLTALDGGNPVK
SGTSTITITVLDVNDNFPVFEKNSYRVSLLENTAKGSFVIKVAATDADEGPNGEIEFSFG
ARTPDSVLTLFNINPSSGEIILKGDLDYERETSYKIEITAKDKGSPEMQSHCRLQIDVID
VNDNKPEIILTSEPQPVREDAPGGTVVALLNVRDADSVNNSKVTLQISKGSPFKLKTSFS
NNYALITSGPLDREKVSDYHVEITATDSGSPPLSSKRIVSVRITDVNDNPPVFTQKSYNV
YLKENGVPGSILFSVSASDLDSGENAKISYSILDSKVQDVSVSSYVYMNSENGSIYSMHS
FDYEKLKVFEIHVQAKDQGSPSLSSNATVHVFILDQNDNAPAVIYPSSAALGSLSHQRMP
RSAKAGHLVTKVTAVDADSGHNAWISYRLAEATDASLFSVNLYTGEVRTKRAVSEQDDSS
QRLILEIKDDGEPLQSATVTVSILLEDALHEPISELRLHKASEPSKKSGRITLYLILSLA
SVSVLSLLTFVILAVKCMRSSRSSGSCCCMRRQDSEDYKNPNRNLQIQLNTDGPIKYVEV
LGGDMMSQSQSFRSCMSPMSEYSDFTLIKPSSTTDFKEVISVLDASLPDSTWTFESQQVS
TEL
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atgggaaatgcggtttatttgattgccttggataatatttatagcggcactgggatgaca
aagacaaaaggataccgagccaggggatggcaggcgctgtggtggcatcatttctttctc
ctgtggagtacaatagacgcacagactcgatacagcatcccggaggagctaaagcacgga
tccgtggtcggaaacctggcgaaagatctgggtttgactttaaccgagatttctgagcgc
gcactgcgcgtcgcctctgagtctggtgagcagtatttccgcgtggatgcggggagagga
gagctgctggtgaacgacagaatagacagagaggctttgtgcggacaaagcgcgagctgc
gtgttgcctttacagttagttcttgaaaaacctctgagtttacatcgaattgaggtggaa
attcaagatattaatgacaatcctcccaaattttatactgaggaattgtttttaaacatt
tcggaaacggctgttgtgggaactcgatttccattagaaagcgcggaggattcagatgtt
ggtggaaattcagtaaaatcctacactttaacaaagaacgaatgtttcacattaaaaatg
aaggaggttgaggatggaaaaaccgttccagagttggtgttagagaagtcgcttgatcgg
gaaataaaagctgttcatcagctccgcctcactgcattagacggaggaaacccggtcaaa
tccggtacctccactataaccataactgtgcttgatgttaatgataatttcccagtattt
gaaaagaattcatatcgagtatctttacttgagaatactgcaaaaggctcgtttgtgatc
aaagtagctgcaactgacgcagacgagggaccaaatggagagattgaattctcattcggc
gcgcgcacacctgattcagtgttaactctatttaacattaacccttcgagtggagaaatt
attttaaaaggcgatttagattatgaaagagagacatcttataaaatcgagataactgcg
aaagataaagggagccctgaaatgcaaagtcactgccgcctccagattgacgttattgac
gtgaatgacaataaacccgaaataattctcacctctgaaccacagccggtgcgcgaggac
gcaccgggaggcaccgtggtggctttacttaatgtgcgcgatgcagattccgttaataac
agcaaagtaactttacaaatatcaaagggttctccttttaaattgaaaacctcgttttct
aataattatgctctaataaccagcggtcctttagacagagaaaaagtatcagattatcat
gtggagatcacagctactgactctggatctcccccactgtctagtaaaagaatagtatct
gtcagaatcactgacgtgaacgacaaccctccagtttttacacagaaatcttataacgtg
tatctgaaggagaacggagttccgggttctattctgttctcagtatccgcgtctgatctg
gattcaggtgaaaacgcaaagatctcttactccatcctggactctaaagttcaggacgtg
tccgtgtcctcctatgtttacatgaactcagagaacggcagcatctacagcatgcactcg
tttgactatgagaagctgaaggtgtttgagatccacgttcaggccaaggaccagggctct
ccttctctcagcagcaacgctactgtccacgtctttatcctggaccagaacgataacgcc
cccgccgtcatttacccctcgtccgctgctctgggctccctgtctcatcagaggatgccc
cgctccgccaaagcgggtcacctggtcaccaaggtgacggcggtggacgcggactcgggc
cataacgcctggatctcctacagactggcggaggccacagacgcctctctgttcagcgtc
aatctgtacacaggagaggtgaggactaaacgcgctgtgtccgagcaggacgactcctct
cagaggctgatcctggagatcaaagacgacggagagccgctccaatccgccaccgtcacc
gtgtccatcctgctggaggacgctctccatgagcccatctcagagctgcgactccacaaa
gcgtccgagcccagcaagaaaagcggcagaatcaccctttatctgatcctgtctctggcc
tcggtgtccgtgctgtctctgctgacgtttgtcatcttagcggtgaaatgcatgaggagc
agcagaagcagcggcagctgctgctgcatgagacgccaagactctgaggattacaagaac
cccaacagaaacctgcagattcagctcaacaccgatggacccatcaagtacgtggaggtc
ctgggaggagacatgatgtctcagagtcagtccttcaggtcctgcatgtctcccatgtca
gagtacagtgatttcactctgattaaacccagcagcaccacagactttaaggaggtcatc
agtgtgctggacgcctctttacctgacagcacctggacctttgagagtcagcaggtgagc
acagagttgtaa
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