Oryzias melastigma (Indian medaka): 112139461
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Entry
112139461 CDS
T07439
Name
(RefSeq) tumor necrosis factor-like
KO
K03156
tumor necrosis factor superfamily, member 2
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04010
MAPK signaling pathway
oml04060
Cytokine-cytokine receptor interaction
oml04150
mTOR signaling pathway
oml04210
Apoptosis
oml04217
Necroptosis
oml04350
TGF-beta signaling pathway
oml04620
Toll-like receptor signaling pathway
oml04621
NOD-like receptor signaling pathway
oml04622
RIG-I-like receptor signaling pathway
oml04625
C-type lectin receptor signaling pathway
oml04920
Adipocytokine signaling pathway
oml05132
Salmonella infection
oml05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
112139461
04350 TGF-beta signaling pathway
112139461
04150 mTOR signaling pathway
112139461
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
112139461
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
112139461
04217 Necroptosis
112139461
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
112139461
04621 NOD-like receptor signaling pathway
112139461
04622 RIG-I-like receptor signaling pathway
112139461
04625 C-type lectin receptor signaling pathway
112139461
09152 Endocrine system
04920 Adipocytokine signaling pathway
112139461
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
112139461
09171 Infectious disease: bacterial
05132 Salmonella infection
112139461
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
oml04052
]
112139461
00536 Glycosaminoglycan binding proteins [BR:
oml00536
]
112139461
Cytokines and neuropeptides [BR:
oml04052
]
Cytokines
Tumor necrosis fators
112139461
Glycosaminoglycan binding proteins [BR:
oml00536
]
Heparan sulfate / Heparin
Cytokines
112139461
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNF
ATR1_WY-dom
Motif
Other DBs
NCBI-GeneID:
112139461
NCBI-ProteinID:
XP_024118040
LinkDB
All DBs
Position
Unknown
AA seq
236 aa
AA seq
DB search
MEVECKVPMNVSDHTEADQPTTMRGKPSSKLTAVMLAVILCLATAAAALLFFNSHAKHPE
VHEDSFHLKLRQIANVRAAIHLGGEFNTSLKDSIQWMAEVDQYHSQGGLKLDNNEIVIPR
NGLYFVYSQASFAVSCSGDSTANSMVHLSHTVQRWSSSYGTSDNKVYRNILHSVRTACQR
AESSEQDGSGHWYSAVYMGAVFNLRRGDRLRTVMDKNMLEQLEDDPGKTFFGVFAL
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atggaggttgaatgcaaggtcccaatgaacgtcagtgaccacacagaagcggatcaaccg
acgactatgagagggaagccaagctccaagttgacagcggtgatgctggctgtcattctt
tgcctcgccacagccgctgccgcactactcttcttcaactcacatgctaagcatccagaa
gtacatgaagactcattccatctcaaactcaggcagattgccaacgtgagagcggccatt
catctgggaggggaattcaacacctccctcaaagactccattcagtggatggccgaggta
gaccagtaccactcccaggggggtctgaagctggacaacaatgagattgtgattcctcgc
aatggcctctacttcgtttacagccaagcgtccttcgcggtcagctgcagcggcgactca
accgccaactccatggtccacctcagccacaccgtgcagcgctggtccagctcgtacggg
acgtcggacaacaaggtgtaccggaacattctgcactctgtacgcacggcgtgccagagg
gcagaaagcagtgagcaggacggcagcggacattggtactccgctgtgtacatgggagct
gtgttcaacctgagaagaggggacaggctgcggacggtgatggataagaacatgctggag
cagctggaagacgatccggggaaaaccttcttcggtgtgtttgctttgtaa
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integrated database retrieval system