KEGG   Oryzias melastigma (Indian medaka): 112139461
Entry
112139461         CDS       T07439                                 
Name
(RefSeq) tumor necrosis factor-like
  KO
K03156  tumor necrosis factor superfamily, member 2
Organism
oml  Oryzias melastigma (Indian medaka)
Pathway
oml04010  MAPK signaling pathway
oml04060  Cytokine-cytokine receptor interaction
oml04150  mTOR signaling pathway
oml04210  Apoptosis
oml04217  Necroptosis
oml04350  TGF-beta signaling pathway
oml04620  Toll-like receptor signaling pathway
oml04621  NOD-like receptor signaling pathway
oml04622  RIG-I-like receptor signaling pathway
oml04625  C-type lectin receptor signaling pathway
oml04920  Adipocytokine signaling pathway
oml05132  Salmonella infection
oml05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:oml00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    112139461
   04350 TGF-beta signaling pathway
    112139461
   04150 mTOR signaling pathway
    112139461
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    112139461
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    112139461
   04217 Necroptosis
    112139461
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    112139461
   04621 NOD-like receptor signaling pathway
    112139461
   04622 RIG-I-like receptor signaling pathway
    112139461
   04625 C-type lectin receptor signaling pathway
    112139461
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    112139461
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    112139461
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    112139461
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:oml04052]
    112139461
   00536 Glycosaminoglycan binding proteins [BR:oml00536]
    112139461
Cytokines and neuropeptides [BR:oml04052]
 Cytokines
  Tumor necrosis fators
   112139461
Glycosaminoglycan binding proteins [BR:oml00536]
 Heparan sulfate / Heparin
  Cytokines
   112139461
SSDB
Motif
Pfam: TNF ATR1_WY-dom
Other DBs
NCBI-GeneID: 112139461
NCBI-ProteinID: XP_024118040
LinkDB
Position
Unknown
AA seq 236 aa
MEVECKVPMNVSDHTEADQPTTMRGKPSSKLTAVMLAVILCLATAAAALLFFNSHAKHPE
VHEDSFHLKLRQIANVRAAIHLGGEFNTSLKDSIQWMAEVDQYHSQGGLKLDNNEIVIPR
NGLYFVYSQASFAVSCSGDSTANSMVHLSHTVQRWSSSYGTSDNKVYRNILHSVRTACQR
AESSEQDGSGHWYSAVYMGAVFNLRRGDRLRTVMDKNMLEQLEDDPGKTFFGVFAL
NT seq 711 nt   +upstreamnt  +downstreamnt
atggaggttgaatgcaaggtcccaatgaacgtcagtgaccacacagaagcggatcaaccg
acgactatgagagggaagccaagctccaagttgacagcggtgatgctggctgtcattctt
tgcctcgccacagccgctgccgcactactcttcttcaactcacatgctaagcatccagaa
gtacatgaagactcattccatctcaaactcaggcagattgccaacgtgagagcggccatt
catctgggaggggaattcaacacctccctcaaagactccattcagtggatggccgaggta
gaccagtaccactcccaggggggtctgaagctggacaacaatgagattgtgattcctcgc
aatggcctctacttcgtttacagccaagcgtccttcgcggtcagctgcagcggcgactca
accgccaactccatggtccacctcagccacaccgtgcagcgctggtccagctcgtacggg
acgtcggacaacaaggtgtaccggaacattctgcactctgtacgcacggcgtgccagagg
gcagaaagcagtgagcaggacggcagcggacattggtactccgctgtgtacatgggagct
gtgttcaacctgagaagaggggacaggctgcggacggtgatggataagaacatgctggag
cagctggaagacgatccggggaaaaccttcttcggtgtgtttgctttgtaa

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