Oryzias melastigma (Indian medaka): 112140504
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Entry
112140504 CDS
T07439
Symbol
znf407
Name
(RefSeq) zinc finger protein 407
KO
K26729
Zinc finger protein 407
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oml03000
]
112140504 (znf407)
Transcription factors [BR:
oml03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
112140504 (znf407)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-C2H2_15
zf-C2H2_REST
zf-C2H2_jaz
zf-met
zf-C2H2_ZN142
C2H2-zf_KIN17
zf-C2H2_2
Zf-C2H2_ZNF451_C
zf-H2C2_5
zf-piccolo
zf-Di19
zf-C2H2_7th_ZNF462
Motif
Other DBs
NCBI-GeneID:
112140504
NCBI-ProteinID:
XP_024119260
LinkDB
All DBs
Position
LG16:29954164..30142863
Genome browser
AA seq
1468 aa
AA seq
DB search
MAETQMLVEEDVECKEPLTDSSEKGQPADVEMEESAGDSAEGAAEADEADGKLVVRSEPT
HADGDNVCTLCGFSAKYPRSLKIHCARKHGKNFGQTPKADEENPNTSDVSPADIQQEAVS
ETEKDDSVLQKPNPDEASNNDGTEMSVPRKGSSYQAQEKQWTVQEEPLHSQERRLSKRTP
KPKIIHSCNYCGQEFRDKSPLDVHVQRYHTKDVPFTFDGDENASEKDNANNQADGKEKPT
QVAPKHLSRFQMKCVSCDFRVGNATVLERHTRVKHPDLKWFRCKLCNFFAATSEWMEVHL
SSDGHQQQQDEKKSPASSSFEACVESVSRDCAGEGGDVDQVVGGEKALTEKEQDGDEAGE
AVMTASAEEEDGEFEPPRKKRGRPKQGSSTTCAHCGLVVSNATNLSVHIRRKHSKEYGYS
CTLCNYSCVTKGDMDRHCFTKKHIKRAQGGSSKNPDSCHIQASLPEATVTQNSTTQSTDG
TQDAEDAVVEEDKVEEQTLSDVDQQQSKYDSVNACSLCDFVAQSIPSLHLHVKRKHTKDF
EYVCLACGYYAVTNREMYRHANTDKHKQRSQRYLELQGGQQQKDSEVPLKQKEIIEPSGE
NSNPSPEDPNSADGSENCFNNRKIHKLSAATETVVTVSADADEKNPIASSGGEPDPTNPT
TEEAVLPEPQQASGELEVTESSPLESLEEKGEHSEEHMDTDVIVDTQMSKAPPFDAAIVS
VKDLGVQEHAPQESSESSTPAPCLGASPSDFILASSAHIKKHKLKEVKMREEARVSISRI
RCEDCGFMADGISGLNVHISMKHPSKERHFHCLVCGKSFYTESNLHQHLTSAAHLRNEQN
SVEELPEGGSSFKCVKCTDRFESEQDLFFHIKEKHEELLREVNKYVLEDTEQINREREEN
QGNVCKYCGKVCKSSNSMAFLAHIRTHTGSKPFMCKICNFATAQLGDARNHVKRHLGMRE
YKCHICGWAFVMKKHLSTHLLGKHGVGQRKERKFECELCDRSFSEKWALNNHMKLHSGEK
PYKCAWPFCHYSFLNLSAMKDHYRTHTGEKSYLCDLCGFAGGTKHALTKHRRQHTGERPF
KCKLCNFASTTQSHLSRHKRVHTGEKPYRCPWCDYRSNCAENIRKHILHTGKHDGVKMYN
CPKCTFATNSPMEFRNHLKDNHPDIENPDLAYLHAGIVSKSFECRLKGQGATFVEAESVS
PIAQRKGSPEASGHEDVQQVIIIQGYGEGDVAIDQALEESAAATLQTLAMAGQVAEVLHI
TEDGQVIASGREVASTGTHLSGGGTQYVVLESGDATKELRAVTRDTLTASAGQSHVVSES
STALDALLSAVSEMGQQEEPHAEATVVHKVFSPQAAEASPDAPSVEVKQEQEEVQIIQEA
GHGDMQEVLQLAASQMMKEGLTQVIVNNEGTHYIVTELDDCTLQVEGGVYREAEAGEEEE
EVQQVEQQAEEEMVVYLAGSPQNIVLEG
NT seq
4407 nt
NT seq
+upstream
nt +downstream
nt
atggcagagacacagatgttagtagaggaggatgtcgagtgcaaagagcctctgactgac
agcagtgagaaggggcagccagccgatgtggagatggaggaatctgcaggtgactctgca
gaaggagctgctgaggctgatgaagcagacggcaaactggtggtgaggtcagagcccacg
catgcagatggagataacgtgtgcacgctttgcggtttctcagccaagtacccaagatca
cttaaaattcactgcgcacgaaaacacgggaagaactttggtcaaactccaaaggctgat
gaggaaaatccaaacacttctgatgtgagtccagctgacatccaacaggaagctgtctca
gagacggagaaggatgacagcgttttacaaaaacccaatcctgacgaagcatcaaataat
gatggcacagagatgagtgtacctagaaagggaagcagttatcaagcacaagaaaagcaa
tggacggttcaagaagagccactccattcccaagagagaagactgagcaaacgaacccca
aaacccaagattattcattcctgcaactactgtgggcaggaattcagagacaagtctcct
cttgatgttcacgtccagagataccataccaaagatgtcccattcacatttgatggtgat
gagaatgcaagcgagaaagacaatgccaacaatcaggctgacgggaaggagaaaccgaca
caagtggcacccaaacatctcagcaggttccagatgaagtgtgtgagctgtgacttcagg
gtcggcaatgccacggtgctggagaggcacactcgcgtcaaacacccggatctgaagtgg
ttccgctgcaagctgtgtaatttctttgcggccacgtctgagtggatggaggttcacttg
tcctcggatggtcaccaacagcagcaggatgaaaagaagagtcctgcatcttcctcgttt
gaggcgtgtgttgagagtgtaagcagagattgtgccggagaaggtggtgatgtggatcag
gtagtcggtggagaaaaggctttgacagaaaaagaacaggatggagacgaggcaggggag
gctgtcatgactgcatcagccgaggaagaagatggagagtttgagccgcctaggaaaaaa
agagggcgaccaaaacaaggctcctctaccacatgtgcacactgtggcctggtcgtgtcc
aatgccaccaacctcagcgttcatattcgtcgtaaacacagcaaagagtacggttacagc
tgcactctgtgcaactacagctgtgtgaccaaaggagacatggatcgccactgtttcacc
aagaagcacattaagcgagcacaggggggttctagcaaaaaccctgactcgtgtcacatt
caggcgtcattgccagaagccacggtgacacagaatagtaccacacagagcacagacgga
acgcaggacgcagaggatgcagttgttgaagaagacaaagtagaggagcagactctgtcc
gatgtggatcaacagcaaagcaagtatgactctgtgaacgcctgcagcctctgtgatttc
gttgctcagtcgattccttccctccatcttcacgtcaagagaaagcacaccaaagacttt
gagtatgtctgcctggcgtgcggatattatgctgtcactaacagggaaatgtatcgccat
gccaacacagacaagcataaacagagaagccagagatacctggaactgcaggggggccag
caacaaaaggattccgaagtcccactgaaacagaaggagatcattgagccttccggggaa
aactctaatcccagcccagaagatccaaactcagcagatggatcggaaaactgtttcaac
aacaggaaaatccacaagttatcagctgccacagagactgtggttactgtgtccgcggat
gcagatgaaaagaaccctattgcgtcttctgggggtgagccagatccaacaaacccaacc
actgaggaagctgtgctgcctgagccccagcaggcttctggagaacttgaagtaactgaa
tcttccccgctagagagcttggaggagaagggtgaacattctgaagaacacatggataca
gatgtgattgtagacacacaaatgtccaaagctccaccatttgatgccgcaatcgtgtct
gtgaaggacttgggtgtacaggagcatgcaccacaggaaagctctgaaagttccactcct
gctccatgtttaggtgcatcaccctcagacttcatacttgccagctctgcacatattaaa
aagcacaaacttaaagaagtgaagatgagggaggaagccagagtcagcatttctcgcata
cgttgtgaggactgtggtttcatggccgacggaatcagcggcctcaatgtccacatttca
atgaagcacccttccaaagagaggcacttccactgtctggtgtgtggcaagtcgttctat
acggagagcaacctgcaccagcacctgaccagcgccgctcatctccgcaacgagcagaac
agtgtggaagagctgccggaagggggctcgagcttcaagtgcgtgaaatgcaccgatcgt
tttgagtcagagcaggacttgttttttcacatcaaggagaaacacgaggagctcctgagg
gaggtcaacaagtatgtgctggaggacacggaacagataaaccgtgaacgagaggagaac
cagggcaatgtttgcaaatactgcggcaaggtgtgcaagagcagcaactccatggccttc
ctggcacacatccgcacacacactggatccaagcctttcatgtgtaagatctgcaacttt
gcaactgctcagctgggagacgccaggaaccacgtgaaaagacacctcggcatgagggag
tacaaatgtcacatctgcggatgggcctttgtgatgaagaaacatctcagcacccacctg
ctgggaaaacacggagtcggacagcgaaaagaaaggaagttcgaatgcgagctgtgcgac
cgctcgttcagtgaaaaatgggccttgaacaaccacatgaagctgcacagcggggagaag
ccgtacaagtgcgcctggccgttctgccactactccttcctcaacctgtcagccatgaag
gaccactacaggacacacactggagagaagtcttatctgtgcgatctgtgcggctttgcg
ggcggcacgaaacacgccctcaccaaacaccgacgccaacatacaggagagagacccttc
aagtgtaagctctgcaacttcgcctccaccacccagtcccacctttcacggcacaagcgc
gttcacaccggagagaaaccgtaccgctgcccctggtgcgactacaggtccaactgtgcg
gagaacatccggaagcatattctccacacggggaagcatgacggagtgaagatgtacaac
tgtcccaaatgcaccttcgccaccaactctcccatggagttcaggaaccacctgaaggat
aatcaccctgatatcgagaatccagacctggcatacctccatgcaggaatcgtctccaag
tccttcgaatgtcgactgaaaggtcagggggccacatttgtggaagctgaatcggtcagc
cctatagcccagaggaagggctcccctgaagcgtcgggtcatgaagacgtccagcaggtc
ataattatccaggggtacggcgagggggatgtggccatcgaccaggctctggaggagtcg
gccgccgccaccctgcagacgctggccatggcgggccaggtggccgaggtgctgcacatc
actgaagatggacaagtcatagcatcaggtcgggaggtggcgtccacaggtacacattta
tccggaggcggtacccagtacgtggttctggagtcgggggacgccaccaaggagttgcgg
gcggtgactagagacactctcacggcgtcggcgggacagagccacgtggtgtcagagtca
tccaccgctctggacgcgctgctgagcgccgtcagcgagatgggccagcaggaggagccg
cacgcagaggccaccgtcgtccataaagtcttcagccctcaagccgccgaggcgtcacca
gacgcgccgtcggtggaggtgaagcaggagcaagaggaggtccagatcattcaagaagcc
ggccatggagacatgcaggaagtcctgcagctcgccgcctcccagatgatgaaggagggc
ctcacgcaggtcatcgtcaacaacgaagggactcactatatcgtaaccgagctggacgac
tgcaccttacaggtggaaggaggcgtgtacagagaggctgaggcaggcgaggaggaggag
gaggtgcagcaggtagagcaacaagcagaggaggagatggtggtttatctggccggatca
cctcaaaatatcgttctggaaggttaa
DBGET
integrated database retrieval system