Oryzias melastigma (Indian medaka): 112141457
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Entry
112141457 CDS
T07439
Symbol
egf
Name
(RefSeq) pro-epidermal growth factor
KO
K04357
epidermal growth factor
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04010
MAPK signaling pathway
oml04012
ErbB signaling pathway
oml04020
Calcium signaling pathway
oml04068
FoxO signaling pathway
oml04510
Focal adhesion
oml04540
Gap junction
oml04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
112141457 (egf)
04012 ErbB signaling pathway
112141457 (egf)
04068 FoxO signaling pathway
112141457 (egf)
04020 Calcium signaling pathway
112141457 (egf)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
112141457 (egf)
04540 Gap junction
112141457 (egf)
09142 Cell motility
04810 Regulation of actin cytoskeleton
112141457 (egf)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
oml04052
]
112141457 (egf)
Cytokines and neuropeptides [BR:
oml04052
]
Cytokines
Growth factors (RTK binding)
112141457 (egf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
EGF_3
EGF
EGF_MSP1_1
DUF5050
Motif
Other DBs
NCBI-GeneID:
112141457
NCBI-ProteinID:
XP_036069941
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Position
LG10:9022345..9048662
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AA seq
1054 aa
AA seq
DB search
MIGAVITAAVMCSVALSSGGPQRRPACWDGRLSGTRRNRSCTVQIFDHVEGGQSCLCPTG
FWTSEPDRNLRDTDASFPSASQPFLMFCHGKSIHRIGLDGRNQRRLVSPVGSSILLDFHF
KGESIFWADRRTGVIYRASVRAARRQKLHSFDKHISGLAVDWIGNFVYWTSEEKGEVRRM
DTNGKNERTLLRNLTKPSSISVDPTSSHLSLETNICRFLFWLSRGMVSSVQRSDEGGRII
RTLLTSAEQLKALTIDRQHRRLFWAQFSLQGESAIASCDYDGKVLHVMDLPLQSHSFAMS
LFREHLYYTDARTHVVKRLNKYTGGEPLEVNIKPNTKVPVALKVVHPLNQPMTQTLFQTG
CNEQSGVCVNVCSSLAEPAVCQCGEGFSLSKQGSHCEDVNECAHWNHGCSLGCENIPGSY
FCTCPKGYGLLPDRKTCRGESLNSRSPPGPPPSLLVANLVDVRVISADGGGDQTLVREPR
GSILAVDYDPLQKQVKTHPLLLCCRDSCFLKTLECCFSVLSARVFLQVYFASSAQKTIER
VHLSGGSRDLLVADGLHSPEGLAVDWVHRRMYWTDSSKSTVDGSTLDGLDRETVVREKLE
RPKGITVHPLEKKLIWTDVGSRPVVEASSLEGGDRAVIASSGLVAPTGLTIDFTENRVFW
CDQKRGVIESAGLDGSDRRVLSENQVGQPFDLAVFEDRLWVSDWEQQLIRTVHKRTGKNL
QWTHSSFLLPASVVVLHDLAKPGADACLHLNGGCAQVCDSEEGVARCSCLPAFVLSTDGK
TCSPVHGLDAGGGAEPDLFTNKMISDQSECHALRCDVNARCLQHADSASCWCLQGFTGDG
HTCVELEASWVTTTSPIEERTRHQNWSSAQRCPSSHEAYCLYQGVCLYYPEMEAYACNCV
PGYMGERCQFSDLEWLELQRAEKEKRKNVTIAACAVVLLSLLALIACVTYCFRTRRLLYK
GSSVDDVSEISVAEDTMCQSTTTSLPKFCPAAERRVAPSDSPETDRGSLSKRIGYQSPAA
PTVVMETTQLDINPSSPSQSSSCSSSSSSFQDPF
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atgattggtgcagtgataacagcagcagtgatgtgttctgtggcgctgagctcaggaggc
ccgcagcggcggccggcatgctgggatgggcggctgtcaggaaccaggaggaaccggagc
tgcactgttcagatttttgaccatgtggagggaggacagagttgtttatgtccgacagga
ttctggacctcagaaccagacaggaatctcagagacactgatgcttcatttccttcagct
tcacagcctttcctgatgttctgccacggcaaatccatccatcggatcggtctggacggc
aggaaccagaggcggctcgtgtccccggtgggaagctccatcctcctcgactttcatttc
aaaggagagagcatcttctgggctgacaggaggacgggggtcatctacagagcttcagtg
agagcagcacgccgacagaaactgcactcttttgacaaacacatctccggccttgcagtg
gactggattgggaactttgtgtactggaccagcgaggagaagggggaggtacggagaatg
gatacaaatggaaaaaatgagaggacgcttttaaggaacttaaccaaaccgagctccatc
agtgttgacccaacttccagtcacctctcattggaaaccaacatttgcaggtttttgttt
tggctttctcgtgggatggtctccagcgtccagcgctctgatgagggggggcggatcata
aggactctgctcacatcagcagagcagctcaaagccctgaccatcgatcgccagcacagg
aggctgttctgggctcagttcagtctgcagggcgagagcgccatcgcctcctgcgactac
gatggaaaggtcctacacgtcatggacctgccgcttcagtctcactcgtttgcaatgtcc
cttttccgggagcatctttactacactgatgccaggacccatgtggtgaagaggttgaac
aagtacacgggtggagagccgctggaagttaacatcaaaccaaatacaaaagttcctgtt
gccctgaaggtggtgcatcctctcaatcagccaatgacacagacattgtttcaaacaggc
tgtaatgagcagagtggcgtctgtgtgaacgtgtgttcgagtctagcagagccagccgtc
tgccagtgcggtgaaggattcagtctcagtaagcagggctcccactgtgaagatgtgaat
gaatgtgctcactggaaccatggctgctctctcggctgtgaaaatatccccggctcatat
ttctgtacctgtcccaaaggatacggccttctgcctgacaggaaaacatgcagaggtgaa
tccttgaacagtcgttctcctccaggacctcccccctctctgctggttgccaatctggtg
gatgtgcgagtcatcagcgctgacggcggcggggatcagactctggtgagagagcccaga
ggatccatcttggctgtggactatgaccccctccagaagcaggtaaagacccaccccctt
ctgctctgctgcagggattcatgcttcctaaaaacacttgaatgttgcttttctgtgttg
tctgctcgtgtgtttctccaggtttactttgccagctctgctcagaaaaccatcgagcga
gtccatctgagcgggggctccagagaccttctggtcgctgatggtttgcactctccagaa
ggactggcagtggactgggttcaccgcaggatgtactggactgacagcagcaagtcgacg
gttgatggcagcactctggatggactcgacagagagactgtggtcagggagaagctggag
aggcccaaaggaatcacagttcaccctctggaaaagaagttaatctggaccgacgttggg
agccggcccgtggtggaggcttcatctttggaggggggcgaccgggctgtcattgcaagt
tctggccttgtggcccccaccggcctgaccatcgacttcacggagaaccgagtgttctgg
tgtgaccagaagaggggtgtgatcgagagcgccggcttggacggatccgatcgacgggtc
ctgtcagagaaccaagtaggtcaaccgttcgacctggcggtgtttgaagaccggctctgg
gtctcggactgggagcagcagctgatccggactgttcacaagcggaccgggaagaacctg
cagtggacccacagcagctttctgctgccggcgtctgtcgtagtgcttcatgacctcgct
aaaccaggagcagacgcctgtcttcacctgaacggaggctgcgctcaggtgtgtgacagt
gaggagggggtggcgcgctgctcctgcctgccggccttcgtcctgtccaccgatgggaaa
acctgctcacctgtgcatggcttagacgcaggtgggggcgcagagccggatctcttcacc
aacaagatgatttcagaccagagtgagtgtcacgccctgcgctgtgatgtgaacgcacgc
tgcctgcagcacgccgacagcgccagctgctggtgtctgcagggattcacaggtgacgga
cacacctgtgtggagttggaagcttcatgggtgacaaccacaagtcctatagaagaaaga
actcggcaccagaactggagctccgctcagaggtgtccatccagccatgaggcctactgc
ctgtaccagggcgtctgcctgtactacccagagatggaggcctacgcctgcaactgtgtg
ccggggtacatgggggagcgctgccagttcagtgacctggagtggttggagctccagcgg
gctgagaaggagaagaggaagaacgtgaccatcgcagcctgcgcggtggtgctcctgtcc
ctgctcgccctcatcgcatgcgtcacctactgcttcagaaccagaagactgctctataaa
ggctcctctgtggacgatgtgagtgagatcagtgtggcagaagacaccatgtgccagagc
accaccaccagccttcctaagttctgccctgcagcggagcgccgcgtggcgccctcggac
tctccagaaacagacagaggatctttgtccaaacgcatcgggtaccagagtcccgcagca
cctactgttgtcatggagaccacccaactggatatcaacccctccagtccatcccagtcg
agctcctgttccagcagctcctcgtctttccaggatcctttctaa
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