Oryzias melastigma (Indian medaka): 112141494
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Entry
112141494 CDS
T07439
Symbol
plod3
Name
(RefSeq) multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3 isoform X2
KO
K13646
lysyl hydroxylase/galactosyltransferase/glucosyltransferase [EC:
1.14.11.4
2.4.1.50
2.4.1.66
]
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml00310
Lysine degradation
oml00514
Other types of O-glycan biosynthesis
oml01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
112141494 (plod3)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
112141494 (plod3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
oml01003
]
112141494 (plod3)
Enzymes [BR:
oml01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.4 procollagen-lysine 5-dioxygenase
112141494 (plod3)
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
112141494 (plod3)
2.4.1.66 procollagen glucosyltransferase
112141494 (plod3)
Glycosyltransferases [BR:
oml01003
]
O-Glycan biosynthesis
O-linked Gal type
112141494 (plod3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
2OG-FeII_Oxy
Anp1
2OG-FeII_Oxy_3
Motif
Other DBs
NCBI-GeneID:
112141494
NCBI-ProteinID:
XP_024120410
Ensembl:
ENSOMEG00000006893
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Position
LG18:complement(279920..289516)
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AA seq
733 aa
AA seq
DB search
MSACRFFCFLVLFGLLSCARAGQRNLSPDNLLVITAATEETDGFRRFMRTAREFNYTVKV
LGLGEDWRGGDVARTVGGGQKVRWLKKELLKHSEEAELVIVFVDSYDVVLAAGPDELLAK
FSRLGHRVVFSAEGFCWPDQRLASKYPQVHSGKRYLNSGGFVGFAPDLSTIVQQWKFKDD
DDDQLFYTRIYLDRAQRNKFNITLDHRSQIFQNLNGAIDEVVLKFERGRARVRNVAYDTL
PVVIHGNGPTKLQLNYLGNYVPTAWTYENGCGICDADLRSFEDTADEQMPLVHLAIFIEH
ATPFMEEFLERLATLNYPHSRLRLFIHNNVVYHEQHIQNFWQRHKSLFPSAVLVGPEENL
EENQARTMAIEACRKDPDCEFFFSLDSDVALTNPDTLRILMEENKSVIAPMLSKHGKLWS
NFWGALSPEGFYSRSEDYIEIVQGKRIGLWNVPYISQVYLVKGSVLRSKLSHLNLFVEEG
MDPDMAFCKNVRDQGVFMFVSNRDEFGRLVASSNFNTSRLHPDLWQIFDNPLDWREKYIH
ENYSKIFEDQKSFVEQPCPDVYWFPAFSEKMCDQLVETMEDHGGWSGGSHKDERLAGGYE
NVPTVDIHMNQIGFEKEWLKFLKDYIAPVTEKLYPGYFPKAHAIMNFVVRYRPDEQPSLR
PHHDSSTFTINIALNRKGVDYEGGGCRFLRYDCKVESPRKGWSFMHPGRLTHYHEGLPTT
RGTRYIMVSFVDP
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcgtgccggttcttctgcttcctggttctgttcggactcctgagctgcgcacgc
gccggccagcggaacctctccccagacaacctgctggtcatcaccgcggcaaccgaggag
acggacggcttcaggcgcttcatgaggacggcccgagagttcaactacaccgtcaaggtt
ctgggtctgggcgaggactggcgcggtggagacgtggcgaggacggtggggggcgggcag
aaggtcaggtggttgaagaaggagctgctcaagcactcagaggaggcggagcttgtgata
gtgttcgtggacagctacgacgtggttctggccgccggtccggacgagctgctcgccaag
ttctcccgtctgggtcaccgggtcgtgttctccgccgagggcttctgctggcccgaccag
cgcttggcctccaagtacccccaggtgcattctgggaaacgctacctgaactctggaggg
ttcgtgggtttcgctccggacctcagcaccatcgtccagcagtggaagttcaaagacgat
gacgacgaccagctgttctacacccggatctacctggaccgcgcccagaggaacaagttc
aacatcactctggaccaccggtcccagatcttccagaacctgaacggagccatcgacgag
gtggtcctgaagttcgagagggggcgggcccgagtgaggaacgtggcctacgacacgctg
cccgtggtcatccacgggaacggacccaccaagctgcagctgaactacctggggaactac
gtccccacggcgtggacctacgagaacggctgcggcatctgcgacgccgacctgcgctcc
tttgaggacacggccgacgagcagatgccgctggtgcacctcgccatcttcatcgagcac
gccacgcccttcatggaggagttcctggagcggctggccacgctgaactacccgcacagc
aggctccgcctcttcatccacaacaacgtggtgtaccacgagcagcacatccagaacttc
tggcagcgccacaagtctctgttcccgagcgccgttctggtcggacccgaggagaacctg
gaggagaaccaagccagaaccatggccatcgaggcgtgccggaaggatccggactgcgag
ttcttcttcagtctggactccgacgtggctctgaccaacccggacactctgaggatcctg
atggaggagaacaagtctgtcatcgcgcccatgctgtccaaacacgggaagctgtggagt
aacttctggggagctctgagtcctgaagggttctactccagatctgaggactacatcgag
atcgtgcaggggaagaggattggactgtggaacgtgccgtacatctcacaggtgtacctg
gtgaagggcagcgtcctgaggtctaaactgtctcacctgaacctgtttgtggaggaaggg
atggatccggacatggcgttctgcaagaacgtccgcgaccagggcgtgttcatgttcgtc
tccaaccgcgatgagtttggacgtctggtggcgtcctccaacttcaacacgtccagactg
catccagacctgtggcagatctttgacaaccctctggactggagggagaagtacatccat
gagaattactccaagatctttgaggaccagaagagttttgtggagcagccctgtccggat
gtttactggttcccggctttctctgagaagatgtgtgaccagctggtggagaccatggag
gaccacgggggctggtctggagggtcccacaaggacgagcggctcgccggcggctacgag
aacgtgccgaccgtggacatccacatgaaccagatcggcttcgagaaggagtggctcaag
ttcctgaaggactacatcgcccccgtcacggagaagctgtaccccggatacttcccaaag
gcccacgccatcatgaacttcgtggtccggtaccgacccgacgagcagccgtccctgcgg
ccgcaccacgactcctccaccttcaccatcaacatcgccctgaacaggaagggcgtagac
tacgagggggggggctgcaggttcctgcgctacgactgtaaggtggagtccccccggaag
ggctggtccttcatgcaccccggccgcctgacgcactaccacgagggcctgcccaccacc
agaggaacccgatacatcatggtgtccttcgtcgacccctag
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