KEGG   Oryzias melastigma (Indian medaka): 112141746
Entry
112141746         CDS       T07439                                 
Symbol
traf3
Name
(RefSeq) TNF receptor-associated factor 3
  KO
K03174  TNF receptor-associated factor 3
Organism
oml  Oryzias melastigma (Indian medaka)
Pathway
oml04620  Toll-like receptor signaling pathway
oml04621  NOD-like receptor signaling pathway
oml04622  RIG-I-like receptor signaling pathway
oml05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:oml00001]
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    112141746 (traf3)
   04621 NOD-like receptor signaling pathway
    112141746 (traf3)
   04622 RIG-I-like receptor signaling pathway
    112141746 (traf3)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    112141746 (traf3)
SSDB
Motif
Pfam: TRAF-mep_MATH zf-TRAF TRAF3_RING zf-C3HC4 Sina_ZnF GAS ATG17_like ATG16 zf-C3HC4_2 Fzo_mitofusin DUF4201 EzrA Crescentin FapA CHASE3 DUF1664 Synaptobrevin KxDL DASH_Dad2 TolA_bind_tri MctB Snapin_Pallidin Rx_N
Other DBs
NCBI-GeneID: 112141746
NCBI-ProteinID: XP_024120709
Ensembl: ENSOMEG00000021259
LinkDB
Position
LG22:2126940..2136246
AA seq 594 aa
MSAGRSADGREVQIPLQQAAPSLALPLSAAAVVSAPSPRSSNPRPPGEPPTQQGAPAGFL
PLRGGFRDHFVEAPEAKYCCEACRLVLCQPRQTECGHRFCYSCINDILSCPNPVCPADME
PLFKDKIFRDVCCHREIMALKVYCRSEANGCQEQMSLQQIPDHLNVCPFFEVPCPLGKCK
ERMMRKEIPEHLAWKCKYRESTCEFCKNKMPLTELQKHKETVCPAFPVSCPNHCTSSSLP
RSELSSHQHDCPKAQVSCQFHRYGCSFKGLNLDMRQHESSFAAEHLKMMATRTGLLETKV
EEVKGELMERYKVLPALSTRLSDLESQTDELRERNRQMEQKLAAMQKLMSSHTEKLLEVE
LELRSLRQLRDEMENLRGTLDTVRTRLSALEQGGRSGSGSAHTLASLETQLNRHDDMLSV
HEIRLADMDLRFQVLETASYNGTLIWKIRDYKRRKQDAVAGKTLSLYSQPFYTGYFGYKM
CARVYLNGDGMGKGTHLSLFFVVMRGEYDALLPWPFKQKVTLMLMDQGPSRKHLGDAFKP
DPSSSSFRRPVAEMNIASGCPLFVSQSVLESGTYIKDDTIFIKVTVDTSDLPEP
NT seq 1785 nt   +upstreamnt  +downstreamnt
atgtcagcggggaggagtgctgatgggagggaggtccagattcccctccagcaggcggcg
ccgtctctcgccctgcccctctctgctgccgctgtcgtctccgccccctctccccgctcc
tccaatcctcggcctccgggcgagccccccactcagcaaggtgctccggcgggtttcctg
ccgctgcgcggaggattcagggatcacttcgtagaagctccggaagccaagtactgctgt
gaggcctgcaggctggtcctgtgtcagccccggcagactgaatgtggacatcgcttctgc
tacagctgcatcaatgacatcctcagctgtccaaacccggtgtgtccggcagacatggag
cctctgttcaaagacaagatctttcgagacgtttgctgccatcgggagatcatggctctg
aaggtttactgccgcagcgaggccaacggctgccaggagcagatgagtctgcagcagatc
ccagaccacctgaacgtgtgtccgttctttgaggttccctgtccgctgggtaaatgtaag
gagcgaatgatgaggaaggagatcccggagcacttagcctggaagtgtaaatacagagag
agcacctgcgagttctgcaagaacaagatgcctctgaccgagctgcagaaacacaaagag
acggtgtgtccagcgtttccggtgtcctgtccgaaccactgcacctcctcctcgctgccc
cggagtgagctctccagccaccagcacgactgtcccaaagcccaggtcagctgccagttc
caccgatacggctgctccttcaagggtctgaacctggacatgaggcagcacgagtcgagc
ttcgccgcagagcacctgaagatgatggccaccagaacggggctcctggagaccaaggtg
gaggaggtcaaaggcgagctgatggagaggtacaaggtcctgccggctctcagtacccgg
ctgtcggacctggagagccagacggacgagcttcgagagaggaaccggcagatggaacag
aagctggccgccatgcagaaactgatgagctctcacacggagaagctgctggaggtggag
ctggagctgcggtcgctgcgtcagctccgagacgagatggagaacctgcgaggaacgctg
gacaccgttcggacccggctgagcgctctggagcagggaggccgcagtggcagcgggtct
gctcacactctggcttccctggagacgcagctaaaccgccacgacgacatgctgagcgtc
cacgagatccggctggcggacatggacctgcggttccaggtgctggagacggcgagctac
aacggcactctgatctggaagatccgcgactacaagaggcggaaacaggacgcggtggcg
gggaagacgctgtcgctgtactcgcagccgttctacaccggctacttcggctacaaaatg
tgcgccagagtttacctgaacggggacggcatgggcaaggggactcacctgtcgctgttc
tttgtggtgatgcggggggagtacgacgccctgctgccctggcccttcaagcagaaggtg
actctgatgctcatggaccagggtccgtcccggaaacacctgggcgacgccttcaagccc
gaccccagcagcagcagcttccggcgtcccgtggcggagatgaacatcgcctccggctgc
ccgctcttcgtgtcccaaagcgtcctggagtccggcacctacatcaaagacgacaccatc
ttcataaaggtgaccgtggacacgtctgacctgcccgagccgtga

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