Oryzias melastigma (Indian medaka): 112142611 Help Entry 112142611         CDS       T07439                                  Symbol ttc3 Name (RefSeq) E3 ubiquitin-protein ligase TTC3   KO K15712   E3 ubiquitin-protein ligase TTC3 [EC:2.3.2.27] Organism oml  Oryzias melastigma (Indian medaka) Brite KEGG Orthology (KO) [BR:oml00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04121 Ubiquitin system [BR:oml04121]     112142611 (ttc3) Enzymes [BR:oml01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      112142611 (ttc3) Ubiquitin system [BR:oml04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     112142611 (ttc3) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TTC3 TTC3_DZIP3_dom wHTH_TTC3 TTC3_9th zf-RING_2 zf-rbx1 zf-C3HC4 zf-RING_UBOX zf-C3HC4_2 TPR_1 zf-C3HC4_3 zf-RING_11 zf-RING_5 zf-ANAPC11 TPR_11 TPR_2 TPR_17 zf-RING_Vps41 Motif Other DBs NCBI-GeneID:  112142611 NCBI-ProteinID:  XP_024121860 LinkDB All DBs Position LG14:24228123..24256281 Genome browser AA seq 1712 aa AA seqDB search MADSDSDSGGEWEKGKCQKYSARESVVTFRVSEEVFENWLKIPTMTKREATQRMKVCSFW LPILLRGDESITASWAVEIGLINLKSTEDLKLKHLRKIEIVEKILFYLEIGTMKKESTRH VLSISNMFNLHSSEVYENALRWLEMAGDCKIREHLKELGSSHTCFTALHFIFTQFAKFIQ ELGGHFERTLATLLARPSDVIVEKCEEMKKKGNENFQKHNYEAALEFYSKALTFYPANHI IYGNRALCYIRCQKYLKAVCDGKRAILIEPRWAKGHYRFCEALFYLGEHQLALQANCSAR QLCKGDPDGLRDLDQQSCKFRAEFQQRKGPQPKKAPSFKAGVMAKQSQTAKTAGRAGSAT NKPAKVTEVKADRKTGKNEKPAEPEVSVKDPKLSQSAPTESNVSPKKKAKSISNEKKPQV SNRGKDACKELKSLVEDGHAALYDLRSRNAEQAFSKALTLVETITPEELGLSTLDVLLLL FGHASALTEIGQVEELTQAEKLLERIKEYEVWVFQSLVFYATGRVYLRENRFTVALQQFL DSLQMVKNQITPGKLTWPLTKEVVRETEPEQFKEILESAIDLCKFPPAPDAVCRLDKCLF PLKAEIYFTDPDFKGFIRLCCCQKCSVEYHITCWKSVKTSVFSEKNEKDILHDACLTPDC VGQICCIKIFGPTGLVKCKFEATIIKPQKTKKPKVNQKCTSPKKLKSKEDRKLKRKQLKR SFQDNQPIGNEILKQDEVSETQSLQKAWVLYRDRILLQISQNTDLLENENNFQVSALISS LKPWLELDFLRGNQIALSLLNCEQGALGQAVELLLERKHRVWARIFIQQLSNCVDINPKL SGWASRLNEAGLSASKAFIERYSGQLEELDLSPVLRFGPLQDIIIEKLGVKPELLSSIGL TLTEYLKQAPSEDARLFIWTLEEFREDYISCHAILDEYFEMMDGHCSVFKKSDENNSPIR AKNRGRKKKKEPKGLKVLPGINGVEPDQVFFDDDSLSFLHPADAFSIPNHLRDQVAEFEE QYNSTSHTSRCKWDLDNNPDPAKESMFDYFAQILEEHGPLMADDPLLVGELEHFPAVARQ KIEEAGGFEEFLLESLRFVKVGRSVGLAKHSMSLQAASLDDLDDIADSDLNFSNFDLDDI TGNGFHLESYTLQNPYFQNPYTFTHQPSGPDFIPNWSEGEFEQFPSFEPTSYEELDLDTF DYSAFETNSAPVREAEAVPQKHAAVQTLQETTRSVAVNTELHERFESSPGDINKTEKHNA QLQQQISDLTNNLEAKPINQEDIILCEQEIKKITTNIQVTHKELAMFQQKLEEDLKKDQQ EKKANQEILKALKVEKEQLIEEHVKFTKQVEENKKTYDSKLRDFLELSNQSAAQKMSLED EIKRCQTLLTSAARRSHTAQLVLAEISRDQKLTGLHRELTDSRTLLSKLDEVIHRFPNKG LEVIREECKINIKEAEKKISAAQKHYRELIDQQKNIRSEKPQNHNSNQPEAAAPSKPLSA AAKVFVPQATGPSSRSASTQSSAAAAEAAAPPSKKKLPNRKLDSHSSVFDKAMESLTAMF PHYSKPDLLRFIQELRTTRGGNLNNMTLQDMVSGVAQLILDHQDKLSAAKANAVGRGSPA HTPPLLTHSTVWQPVRSQRAPGSKALNVEDPCIICHEDMDPDDTSVLECRHSFHTECIKS WLKEQRTCPTCRTHALLTDDFPKLPGRRHLAL NT seq 5139 nt NT seq  +upstreamnt  +downstreamnt atggcagactcagattctgactctggtggtgaatgggagaaaggaaaatgtcaaaaatat tcggccagagaatcagttgtcaccttccgtgtatcagaggaggtttttgaaaactggctg aaaattcccaccatgaccaaaagagaagcgacacaacgaatgaaagtttgttccttctgg cttcccatactgcttcggggggacgagtccatcactgcatcatgggctgtagaaattggg ttaattaacttaaagagcactgaggacctaaagttgaaacatctgcggaagatagaaatc gtggaaaaaatcctgttttacttggagataggaactatgaaaaaagaatcgacgcgtcac gttctttcaataagcaacatgtttaatctgcattcttcagaggtgtatgaaaatgcgttg cgctggttagaaatggcgggagattgcaaaatccgcgagcacctgaaggaactcggcagc tcacacacctgcttcacagcccttcactttatcttcacacagtttgccaagtttattcaa gaactgggaggacactttgagcggacgctggcgacgctgctggctcgccccagtgacgtt atcgtcgagaaatgtgaagaaatgaagaagaaaggaaacgagaactttcaaaaacataac tatgaagctgcgcttgagttctactccaaagccctcacattttaccctgccaaccacatc atttatggaaacagagccctgtgctacattcgctgtcagaagtacctaaaagcagtttgt gatggaaaacgagccattcttattgaacctcgctgggcaaagggtcattatcgattttgt gaggctttattttatctcggagagcaccagttggctcttcaagcaaactgttcagcaaga caactttgtaaaggcgacccagatggactcagagatctggaccaacagagctgtaaattc agagctgaatttcagcaacgcaaaggtcctcaaccaaagaaagctccgagttttaaagca ggcgtcatggccaaacagtcgcaaactgcgaaaacagccggtagagctggttcagcaaca aacaagcctgcaaaggtcacagaggtaaaagcagacagaaaaacaggtaaaaatgaaaaa cctgcagaaccagaggtcagcgttaaagaccctaaactgtcacaaagtgcgccgacggaa tcgaacgtttctccaaaaaagaaggctaagagcatatcgaatgaaaagaaaccacaggtg tccaatagaggtaaagacgcgtgtaaagagttgaaatcgttggtggaagacggacacgcg gcgttgtacgacctccgaagccgcaatgcggagcaggccttcagcaaagctctgaccctg gtggagacgataacacccgaggagcttggactttctactcttgatgttctgctattactt tttggacatgcttcggctctgacagaaattggacaagttgaggaactgacacaagcagag aaactcctggagagaatcaaagagtatgaagtgtgggtgttccagagtctggtcttctac gccaccgggagggtttatctgagggaaaacaggttcacagtcgcattgcagcagtttcta gattctttgcagatggtgaagaatcaaataactccaggtaaactcacctggcctttaacc aaagaagtcgtcagagaaactgagccggaacagtttaaagaaattctggagagtgctatt gatttgtgtaaatttcctcctgctcctgatgccgtttgccgcctcgacaaatgcttgttc cctctgaaagcagaaatctacttcacagatccagattttaagggctttattcggttatgc tgctgtcaaaagtgcagcgttgaataccacatcacttgttggaagtctgtgaagacgtcc gttttttctgagaagaatgaaaaggatattttgcatgatgcctgtttgacgccggattgt gtcggccaaatctgttgtatcaaaatttttggtccgacaggcctggtgaaatgtaagttt gaagctacaatcatcaagccgcagaagacgaagaagcctaaagtgaatcagaaatgtaca agcccaaagaaattaaagtctaaagaagatcgtaagctaaagaggaagcagcttaaaagg tcatttcaagataatcagcccattgggaacgagattttgaagcaagatgaagtttctgag acgcagagtttgcaaaaagcttgggttctgtacagagatcggattcttctgcagatcagt caaaacacggatcttctggagaacgagaacaacttccaggtttctgctttgatcagcagc ctgaaaccctggctggagctggactttctcagggggaaccaaatcgctttgagtcttttg aactgcgaacagggggctttaggtcaagctgttgagcttctgctggagaggaaacaccgg gtttgggcccgaatctttatccaacaacttagtaattgcgtggatataaatcccaaactc agtggctgggcaagtcggctaaatgaagcaggtttgagtgcttccaaggctttcattgaa cgttattcaggacagctggaggaactggacttgtcacctgttctcagatttggacctttg caggatataattattgaaaaacttggcgttaaaccggagcttttatcgagcatcggcttg actctgactgaatacttaaagcaggccccgtcggaggacgccaggctctttatctggact ctggaggagtttagagaggactacatctcctgccacgctattctggatgaatattttgaa atgatggatggacactgttcagtctttaaaaagtcagatgaaaataattctcctatcaga gctaaaaatcgaggtcggaaaaagaagaaagagccgaagggtctaaaagttttacctgga ataaacggggtagagccagaccaagtcttttttgatgatgactctttatcattcctccac cctgctgatgccttcagcatccccaaccacctccgagaccaggtggcggagtttgaggag cagtacaacagcacctcccacacgagtcgctgtaaatgggatttggacaacaatccagac ccggcaaaggaaagcatgtttgattattttgcccagatcttggaggagcacggccccctc atggcagacgaccctctgctggtgggagagctggagcacttccccgccgtggcgaggcag aagatcgaagaggcgggcggttttgaggagtttcttttggagtcccttcggttcgtgaag gtgggcaggagcgtgggcctggcaaagcactcgatgtcgctgcaggcggccagcctggac gacctggacgacatcgcagactctgacctgaacttctcaaactttgatttggacgacatc actggaaacggtttccacctggagagttataccttacagaacccctactttcaaaaccca tatacgtttacccatcagccctcggggccagacttcatccccaactggagtgaaggagaa tttgagcagtttccgtcctttgagcccaccagttatgaggagctcgatcttgataccttt gattattctgcttttgaaactaactcggcgccggtcagagaggctgaagctgtccctcag aaacacgctgcagtgcagacgctgcaggagaccacaaggagtgttgccgtgaacacagag cttcatgagcgctttgagagcagcccgggtgacatcaataaaacagagaagcacaacgct cagcttcagcagcagatctcagatttgacgaataaccttgaagccaaaccgataaaccag gaagacatcattttatgtgagcaggaaattaagaagataacgacaaacattcaggtgacc cacaaagagctggcgatgttccagcagaagctggaggaagacttgaagaaggaccagcag gagaagaaggccaaccaggagattctgaaggctctgaaggtggagaaagagcagctgata gaggaacacgtcaaattcaccaagcaagttgaggagaacaaaaagacttatgacagcaag ttgagggatttcctggagttgagcaatcagtctgcagcacagaagatgagtctggaagat gagatcaagcggtgccaaaccctgctcacctcagccgctcggaggtctcacaccgctcag ctggttttggctgaaatcagtagagatcagaagctgactggactccacagagagctgacg gacagcaggactttgctgtctaaactggacgaggtcattcacagattcccaaacaaaggt ctggaggtgatcagggaggagtgcaaaattaacatcaaagaagcggagaagaagatttct gctgcccagaaacattaccgggagctgattgatcaacagaagaacataagaagtgagaag ccccagaaccacaacagtaaccagcctgaagctgcagctccatcaaaaccactctctgca gcagccaaagtatttgttcctcaggcgacgggtccatcctcccgctccgcctccacccag agctccgccgctgcagccgaggccgcggcccccccgtcgaagaaaaaactccccaacagg aagttggattctcacagcagcgtgtttgacaaagccatggagagcctgaccgccatgttc ccgcactactccaagccggacttgctgaggttcatccaggagctgagaacaaccagaggt gggaacttgaacaacatgacgctgcaggacatggtcagtggggtggcccagctgatcctg gaccaccaggataagctcagcgccgccaaggcgaatgctgttggtcgcgggagtccggct cacactccacctttgctgacccactccacggtttggcagcctgtcaggtcacagagggct ccgggttctaaagcgctgaacgtcgaggatccgtgcatcatctgccacgaggacatggac ccggatgacacgtcggtgctggagtgcagacacagcttccacacagagtgcatcaagtct tggctgaaggagcagaggacctgtcccacctgcaggacgcacgccctgctgaccgatgac ttccccaagctgcccggcagaagacacctagccctctaa

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