Oryzias melastigma (Indian medaka): 112143206
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Entry
112143206 CDS
T07439
Name
(RefSeq) focal adhesion kinase 1 isoform X9
KO
K05725
focal adhesion kinase 1 [EC:
2.7.10.2
]
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04012
ErbB signaling pathway
oml04148
Efferocytosis
oml04370
VEGF signaling pathway
oml04510
Focal adhesion
oml04517
IgSF CAM signaling
oml04518
Integrin signaling
oml04810
Regulation of actin cytoskeleton
oml05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09132 Signal transduction
04012 ErbB signaling pathway
112143206
04370 VEGF signaling pathway
112143206
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
112143206
04518 Integrin signaling
112143206
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
112143206
09144 Cellular community - eukaryotes
04510 Focal adhesion
112143206
09142 Cell motility
04810 Regulation of actin cytoskeleton
112143206
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
112143206
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
oml01001
]
112143206
01009 Protein phosphatases and associated proteins [BR:
oml01009
]
112143206
Enzymes [BR:
oml01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.2 non-specific protein-tyrosine kinase
112143206
Protein kinases [BR:
oml01001
]
Non-receptor tyrosine kinases
FAK family
112143206
Protein phosphatases and associated proteins [BR:
oml01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
112143206
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Focal_AT
Pkinase
FERM_N_2
FERM_C_FAK1
FERM_M
FERM_F2
Kinase-like
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
112143206
NCBI-ProteinID:
XP_024122770
Ensembl:
ENSOMEG00000012259
LinkDB
All DBs
Position
LG16:15909394..15971569
Genome browser
AA seq
1138 aa
AA seq
DB search
MESSGCIPLCWSKGACIYAQHPLPKYDGQLTPATPSESGMASSSYLEPSLNHSTAGGCGV
KSRPGVPGGPGTSSSAGGLERPPGSMDRVLKIFHYFETNSEPSTWASNIRHGDATDVRGV
IQKIAEIHKLRCVSSLGLRLTHLHSDALHWLHPDLGVSHVREKYEKKHPQEEWRYELRIR
YFPKGYISHFSEDKPSLNYLYHQVKSDYMQYIADQVDQDIALKIGCLEIRRFFREMPGNA
LDKKSNYELLEKDVGLRRFFPKSLLDSLKAKTLRKQIQQTFKQFANLNDEQSILKFFEII
TPIYRFDKECFKCALGSSWVISVELAIGPEEGISYLTDKGLTPTHLANFNQVQSIQYSAL
EEKDRKGMLQLNVAGAPEPLTVTTSSLTTAENMADLIDGYCRLVSSVSHSFIVRVHKEGD
RALPSLPKVTNHEKRMEKRMDGVRTRAVCVSGHISGDETDDYAEIIDEEDTYTMPSKYYG
LDQARDYEIQRDRIELGRCIGEGQFGDVHQGVYIRSENPALSVAVKTCKNSTSDSVREKF
LQEALTMRQFDHPHIVKLMGVITENPVWIIMELCTLGELRSFLQVRKYSLDLATLILYSY
QLSTALAYLESKRFVHRDIAARNVLVSTVDCVKLGDFGLSRYMEDSSYYKASKGKLPIKW
MAPESINFRRFTTASDVWMFGVCMWEILMYGIKPFQGVKNNDVIGRIENGERLAMPPQCP
PTLYSLMTKCWSYDPSKRPRFNELKTQLSTILEEEKIQQEERSRMEMRRQVTVSWDSGGS
DEAPPKPSRPGYPSPRSSEGFYPSPQHPGHYQMAGYPGPHTLPSVPSAMYPPQAALLDTH
HAHTHPRHHVHTHSHAQHLPQPHGADMALWGSALEDRAVDMQLCTDPQCLLMEEQLMIQQ
QQMEEDQRWLEEEERLLKPDTRSSRGSLDREDSGPQQPTGNQHIYQPVGKAEHAAPPKKP
PRPGAQTQVGSLACLNTGDGYNDGVKPWRLQPQEISPPPTANLDRSNDKVYENVTGLVKA
VIEMSSKIQPAPPEEYVPMVKDVGLALRTLLATVDETLPQLPASTHREIEMAQKLLNSDL
AELIGKMKLAQQYVMTSLQQDYKKQMLTAAHALAVDAKNLLDVIDQSRLKMMTHSRPH
NT seq
3417 nt
NT seq
+upstream
nt +downstream
nt
atggagagcagtggctgcatccctctgtgctggagcaaaggggcctgcatctatgcccag
caccccttaccaaaatatgatggccagttaaccccagcaaccccgtctgaatctggtatg
gcatcgtcttcctacctggaacccagccttaatcactccacagcgggtggttgtggggtc
aaatcccggcctggagtgcctggtggtcccggcactagtagctcagctgggggtttggag
cgccccccgggctccatggaccgagtcctgaagatcttccattactttgagacaaacagc
gaacccagcacttgggcgagtaatatcaggcacggagatgccacagatgtcaggggtgtt
atacagaagatagcggaaatccacaaattgcgttgtgtgtcttctttgggccttcgtcta
acccatttgcactctgatgctcttcactggttacatcctgatttgggggtgtcccatgtg
cgagaaaaatatgagaaaaagcatccccaagaggagtggaggtatgaattgcggatacgg
tactttccaaaaggttatatcagccatttctcagaggacaaaccctcgctcaactacctt
tatcatcaggtgaaaagcgactatatgcagtatatagccgaccaggtggatcaagatatt
gcacttaaaataggttgtttggaaataaggagattcttcagagagatgccaggcaatgcg
ctggataagaaatccaactatgaacttctagagaaagatgtgggtttgagaagatttttc
cccaaaagccttttggactctttgaaggcgaagactctccgtaagcagatccagcagacc
ttcaagcagtttgctaacctcaacgacgagcagagcatcctcaagttctttgaaataatc
acacccatctaccgcttcgataaggagtgctttaaatgtgctttagggtcgagttgggta
atatcagtagagctggcgattggaccagaggagggaatcagctacctcacagataagggc
ttgacgcctacacacttagctaacttcaaccaagtccagtctattcagtactctgcgctg
gaggagaaggacaggaaaggaatgctgcagctaaatgttgctggagctccagagcccctc
actgtcactacatcatctctgaccacagcagaaaacatggctgacttgattgacggttac
tgtcggctcgtctcctcggtgtctcactccttcatcgtcagagttcacaaagagggtgat
agagcccttccttctttaccaaaagttacaaatcatgagaagcggatggagaaacggatg
gacggagtgcgaactcgagccgtttgtgtttcaggtcacataagtggcgatgaaacagac
gactatgcagaaatcatagacgaggaggacacctacaccatgccttcaaaatactatgga
ttagatcaagcgcgggactatgagattcagcgcgatcgtatcgagttgggccgctgcatc
ggtgagggtcagtttggagatgttcaccagggagtctacattagatcggagaacccagct
ctgtctgttgcagtgaagacgtgcaagaactcaacgtcggacagcgtcagggaaaagttc
ctgcaggaagcattaaccatgcgtcagtttgaccatcctcacatcgtaaagctgatggga
gtgatcacagagaatcctgtgtggatcatcatggagctctgcacactaggagagctgcgg
tcatttctccaggtcaggaagtatagtctggacctggccacgctcatcctgtactcatac
cagctcagcacagcactggcatatctggagagcaaacgctttgtccacagggacattgca
gcgaggaatgtgttggtgtccacagtcgactgcgtaaaactgggagactttggtttgtca
cgatacatggaagatagttcgtattataaagcatctaaaggtaaattacctattaaatgg
atggctccagaatcaatcaacttcaggcgatttaccacagccagtgatgtgtggatgttt
ggtgtctgcatgtgggagattctgatgtacggcatcaagcctttccagggtgtgaagaac
aacgacgtcatcggcaggatagagaacggcgagcgattggctatgccccctcaatgcccc
ccaaccctctacagcctgatgacaaagtgttggtcgtacgaccccagcaagaggccgcgc
ttcaatgaactgaaaacccaactcagcacaattttagaggaagagaaaatccagcaagag
gaacgaagcagaatggagatgaggagacaggtcactgtgtcgtgggactctggagggtct
gacgaagctccaccaaaaccaagtagacctggttaccccagtcctcgctccagtgaaggc
ttctaccccagtcctcagcaccctggacactaccagatggcagggtatccaggacctcat
actctgccctccgtgcccagtgccatgtaccccccacaagcggctctactggacacacac
cacgcacacacccatccacgccaccacgtccacacacactcgcacgcacagcaccttccc
cagccacacggggcagacatggcgttatggggctctgcactggaggacagggcagtagac
atgcagctctgtacagaccctcagtgcctgctaatggaggagcagctgatgatacaacag
cagcagatggaggaggatcagaggtggctggaggaggaggaaaggctgctgaaacccgac
acaaggagttccagagggagtctggacagagaagacagtggaccacagcagccaacagga
aaccagcacatatatcagccggttggcaaagcagagcatgcagcacctccaaagaaaccc
cctcgaccaggagcgcagacccaagtaggcagtctggcctgtctaaatactggagacggc
tacaatgacggagtcaagccctggcggctgcagcctcaagagattagcccgcctccaacc
gccaacctggaccgctccaatgacaaagtgtacgagaacgtgacgggattagtaaaggct
gtgattgagatgtcgagcaagattcagccggcacccccagaggagtacgtgcccatggtc
aaggatgtgggtctggcactgaggacgctgttggccacagtggatgagacgctacctcag
cttccagccagcacacacagagagattgagatggcacaaaagctgctgaactctgacctg
gcagagctgatcgggaagatgaagttagcccaacagtatgtgatgaccagtctccagcag
gactacaagaagcagatgctgaccgctgcacatgctctggctgttgacgccaagaacctc
ctggacgtcatcgaccaatcccggctcaaaatgatgactcattcccggccgcattag
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integrated database retrieval system
