Oryzias melastigma (Indian medaka): 112143463
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Entry
112143463 CDS
T07439
Symbol
psen2
Name
(RefSeq) presenilin-2
KO
K04522
presenilin 2 [EC:3.4.23.-]
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
112143463 (psen2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
oml01002
]
112143463 (psen2)
Peptidases and inhibitors [BR:
oml01002
]
Aspartic peptidases
Family A22: presenilin family
112143463 (psen2)
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Gene cluster
GFIT
Motif
Pfam:
Presenilin
DUF3377
Motif
Other DBs
NCBI-GeneID:
112143463
NCBI-ProteinID:
XP_024123229
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Position
LG16:18073487..18081452
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AA seq
423 aa
AA seq
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MSLSDSEDDVYNERTALVASEKPPVPSYRPSSDGSPPDGSPPGRTRASGLARGGATDSDQ
ELEAGEEELPLKYGAKHVIMLFVPVTLCMLVVVATIKSVSFYTEKTNQQLIYTPFTEDTP
SVGRRLLNSVLNTIIMISVIVVMTIFLVVLYKYRCYKFIHGWLILSSLMLLFWFSFMYLG
EVFMTYNLAVDYVTVAMIIWNFGAVGMICIHWKGPLQLQQAYLILISALMALVFIKYLPE
WSAWVILGAISVYDLVAVLSPKGPLRMLVETAQERNEPIFPALIYSSAMMWGVAMASPMD
AHGSDTDEEAEQRRERAEPPSGQYGAEDEPEEDRGVKLGLGDFIFYSVLVGKAAATGGDW
NTTIACFIAILIGLCLTLLLLAIFKKALPALPISITFGLIFYFSTGFVVQPFMDSLAAHQ
FYI
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgtctgacagcgaggacgacgtctacaacgaacggacggcgttggtggcgtcc
gagaagccgccggtgccgtcctacaggcccagctcggacggcagcccccccgacggctcg
ccccccggacgcacgagggcgagtggactcgcacgcggaggcgccacggacagcgaccag
gagctggaggcgggagaggaggagctgccgctgaagtacggcgccaagcacgtcatcatg
ctgttcgtccccgtcacgctctgcatgctggtcgtggtcgccaccatcaagtccgtcagc
ttctacacggagaagaccaaccagcagctgatctacacgccgttcacagaagacacgccc
tccgtcggccgccgcctcctaaactccgtcctcaacaccatcatcatgatcagcgtcatc
gtggtcatgaccattttcctggtggtcctctacaagtaccgctgctataagttcatccat
ggctggctcatcctctcctcactcatgctgctcttctggttcagcttcatgtatctgggc
gaggtcttcatgacctacaacctggcggtggactatgtgacggtggccatgatcatctgg
aacttcggggcggtggggatgatctgcatccactggaagggccccctgcagctgcagcag
gcctacctgatcctcatcagcgccctgatggcactcgtcttcatcaagtacctgccggag
tggtcggcgtgggtcatcctgggggccatctcagtctacgacctggtggccgtcctcagt
cctaaaggacccctcaggatgctggtggaaacggcgcaggagcgcaacgagcccatcttc
cccgccctcatctattcctcagccatgatgtggggcgtggccatggcgagcccaatggac
gctcacggctctgacacagatgaggaggcggagcagaggagggaaagggcggagcctccg
agtggacagtatggggcagaagacgagccggaggaggaccggggggtgaaactaggcctg
ggggacttcatcttctacagcgtcctggtggggaaagcggcggcgaccggcggcgactgg
aacaccaccatcgcctgcttcatcgctatcctcattggcctttgcctgacgctgctgctg
ctcgccatctttaagaaggctctgccggcgctgcccatctccatcaccttcggcctcatc
ttctacttctccactgggttcgtggtccagcccttcatggacagcctggcggcccatcag
ttctacatatga
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