Oryzias melastigma (Indian medaka): 112143498
Help
Entry
112143498 CDS
T07439
Name
(RefSeq) histone-lysine N-methyltransferase SETDB1-B isoform X1
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml00310
Lysine degradation
oml01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
112143498
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oml03036
]
112143498
Enzymes [BR:
oml01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
112143498
Chromosome and associated proteins [BR:
oml03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
112143498
Heterochromatin formation proteins
Other heterochromatin formation proteins
112143498
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tudor_4
DUF5604
Tudor_5
SET
MBD
Pre-SET
53-BP1_Tudor
Motif
Other DBs
NCBI-GeneID:
112143498
NCBI-ProteinID:
XP_024123298
Ensembl:
ENSOMEG00000009457
LinkDB
All DBs
Position
LG16:complement(7426030..7439212)
Genome browser
AA seq
1241 aa
AA seq
DB search
METVEGMEVDGWDSSLEEELGISLDELKKWIDEAVEKSEIVQKKKAQLTELKEWVEQKEE
EEAKTEMLLTDANQSVLECEKLVKEAYQKNGLVYRESGSEDEGGGGGSLPSEVIEIDDDD
DDDVIAVGCLVPPNKTLTPSKDPVLKEASAVLQKTTHQVQKLVQIVTKSPASAALLRSPT
QLSAPSSVQSSAPAVFVSQAPSQGMTQPSPKIKEDELKVGMNILGKKRTKTWHKGTLVAI
NPIGGGIYKYKVKFDKGKSLLSGNHVAFEYNPTLESLFVGARVVAKYKDGNLVWLYAGIV
AEMPNNKNRMRFLIFFDDGYASYVILPELYPVCRPLKHTWEDIEDASCRDFIEEYISAYP
SRPMVLLKAGQIIKTEWEGTWWKSRVEEVDGSLVKILFLDDKRSEWIYRGSTRLEPMFNL
KMTTANTQEKKLAGQQRTRPNMGAFRTKGPVVQYTGVEHVGGSPVKSPQPSSTEAATPQP
QPSPQPQQPQQIVQITQPTQPPRIENKTQMAKKSTSPFVPGVGGTHASKIMQSLTSSPTN
ITSAKLVSPPVTPQSSFPSLYQRQQPALPPAPPPMPHVVATIPTQTSYRAPTDRIFYLAH
TCQPACLKRVRPAKPDIHRGKNPLLTPLLYDFRRMTGRRKVNRKMSFHVIYKAPCGLCLR
NMPEIQNYLFQTRCDFIFLEMFCLDPYVLVDRPFQPQRPFYYIPDITGGKEDIALSCVNE
IDNTPPPKVKYSKERIPEDGVFINTSADFLVGCDCTDGCRDKSKCSCHQLTLQATACTPG
AQINPNAGYLYKRLEECLPTGIYECNKRCKCCAQMCTNRLVQHGLQVRLQLFKTQNKGWG
IRCLDDVAKGSFVCIYAGKILTDDFADKEGLEMGDEYFANLDHIESVENFKEGYESEAHC
SDSEGSGVDVSRMKIQPSALVSSNSGGRHPRKARNSSSSSESNDDEDKDSKSEDESDSSD
DTFVKDNYYTSSSVWRSYTTRGQLKGNKEGSQDSKDGLSVTPREKGDENPPAMPEETGKS
KVAFWLTSQGLKKETGDSKSLTKSDPGKKQVVMTLSDSDDVQTISSGSEDNKEKEKVPTG
VNVHISGVPKKQVAVKSTRGIALKNSHSMMVKSGPGGGGGGPGGHQAGKTGTSGQTTGGG
ENAPKNTRLFFDGEESCYIIDAKLEGNLGRYLNHSCSPNLFVQNVFVDTHDLRFPWVAFF
ASKRIRAGTELTWDYNYEVGSVEGKELLCCCGSTECRGRLL
NT seq
3726 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccgtagaaggaatggaggtggatggctgggactccagtctggaggaagagttg
ggcatatctctggatgagctgaagaagtggatcgacgaagctgtggaaaagagtgagatt
gttcagaagaaaaaagctcagctgacggagcttaaggaatgggtggagcagaaagaggaa
gaggaggcaaagacggagatgcttcttactgatgccaaccagtctgtgttagagtgcgag
aagctggtgaaggaagcttatcagaagaatggtcttgtttaccgtgagagcggctccgag
gatgagggaggtggaggaggttctctcccctctgaagtgatagagatagacgacgatgat
gatgacgacgttatagctgtcgggtgtttggttcccccaaacaagacattaactccctct
aaagaccccgtgttaaaggaagcctctgcagttcttcaaaaaacaacccaccaagtgcag
aagttggtccaaatagtcacaaagtctccagcatctgcagctctgcttcggtctccaaca
cagctctctgctccttcaagtgttcaaagctcggcaccggcagtgtttgtgtctcaggcc
ccatcccaaggaatgacccagccaagcccgaagataaaagaagatgagctcaaagttgga
atgaacattctgggaaagaaacgtaccaagacctggcacaaaggcaccctcgttgccatc
aacccaattggaggcgggatttacaaatacaaagtgaagtttgataaaggcaagagtctg
ctgtctggaaaccacgtggctttcgaatacaaccccaccctggagagtctgtttgttggg
gctcgagtcgtggccaagtacaaagatggcaacctggtgtggctgtacgcaggaatcgta
gcagaaatgcccaacaacaagaaccgcatgagattcttgatcttcttcgatgacggctat
gcttcgtacgtcatacttcctgaactctatccagtttgcagacctttaaaacacacttgg
gaggatatagaagatgcatcttgtcgagacttcatcgaggagtacatctccgcctatccc
agcaggccgatggtgctcctcaaggccggacaaatcatcaagacggagtgggaaggaacc
tggtggaagagcagggtggaggaggtggacggcagcttggtcaagattctctttttagat
gataagaggagtgagtggatctaccgaggatccaccaggttggagccaatgttcaacctg
aaaatgaccacagccaacacccaggagaagaagctggctgggcagcagaggaccagaccg
aacatgggagcgtttcggaccaaaggccccgtcgttcagtacacaggggtggaacacgtc
ggaggttctcctgtcaaaagcccccagccctcatctactgaagctgcgactccacagcct
caaccgagtccacaaccacagcaacctcagcagatcgtacagatcactcagcctacccag
cctccacgtatcgagaataaaactcagatggcaaagaagagtacgtctccttttgttcct
ggagttggaggcacacacgcttccaaaatcatgcagtctttgacctcctctcccactaat
attacaagtgcaaaacttgtgagtcctcctgtcactcctcagtccagttttccctcgttg
tatcagagacagcagcccgctctacctcctgccccccctcccatgccacacgtggtggcc
accattcccacgcagacctcgtacagagccccgacagaccgcatcttctacctggcccat
acgtgtcagcctgcctgtctgaagcgggtcagaccagcaaagccagacatccacagaggc
aagaaccccctcctcacgcctctgctgtatgatttcagacgcatgacgggacgccgtaaa
gtcaatcggaagatgtctttccacgtgatctacaaagctccgtgtggactctgtctgcgc
aacatgccagagatccagaactacctcttccagacgcgctgtgacttcatcttcttggag
atgttctgcctagatccctacgtgctggtggaccgccccttccagccgcagaggcccttc
tattacattccagatatcactggtgggaaggaggacatcgccctgtcctgtgtgaacgag
atcgacaacactccgcctcccaaagtcaaatacagtaaagaacgtattccagaagatgga
gtattcatcaacaccagcgctgacttcctggttgggtgtgattgcactgacggctgtcga
gacaagtccaaatgttcctgccaccagctgacacttcaagccacagcttgcacaccaggg
gcgcagatcaacccaaacgctggatatttgtacaagcgattagaggagtgcctgcctaca
gggatctatgagtgtaataaaaggtgcaaatgttgcgctcagatgtgcaccaacaggctg
gtgcagcacggcctgcaggtccgtcttcagcttttcaagacccagaacaaaggctggggg
atccggtgtctggatgatgtggctaaaggctcctttgtctgcatttatgctggtaaaatc
ctgacggacgattttgctgacaaagaaggtctggaaatgggcgatgaatatttcgccaac
ctagaccacatcgagagcgtggagaacttcaaggaaggctacgagagcgaggcgcactgc
tcagacagcgagggaagcggcgtggatgtttccaggatgaaaatccagccatctgcttta
gtgtccagcaacagcggaggtcgacatcccaggaaggctcgcaactcaagctcgtccagt
gaaagcaatgatgacgaggacaaagattcaaagagtgaagacgaaagtgacagttcagat
gacacttttgtcaaagataactactacacttccagttctgtgtggaggagttacacaaca
cgaggccagctcaaaggcaacaaagaagggagtcaagacagcaaagatggattgagcgtc
acaccccgagaaaaaggggatgagaaccccccagccatgcctgaggagacgggcaaaagc
aaagtggctttttggctaacgagccaggggctcaagaaggaaactggagatagcaaaagt
ctgacaaaatcagacccaggaaagaagcaggttgtgatgactctctcagacagcgatgat
gttcaaaccatcagctctggatctgaggacaacaaggagaaggagaaagtcccaacaggt
gtcaatgtgcatatctcaggtgtgcccaagaagcaggtggcggtgaagtccactcgaggc
atcgccttgaaaaacagccacagtatgatggtaaaaagcggtccgggcggaggtggcgga
ggaccgggaggccaccaggcggggaaaacggggacgtcgggacaaaccaccggaggcggg
gagaacgctcccaaaaacacccgtctgttcttcgacggcgaggagtcctgctacatcatt
gatgccaagttggagggaaacctcggacgttatctgaaccatagctgcagtccaaaccta
tttgtccagaatgtgtttgtggacacacatgatttgcggttcccctgggtggctttcttt
gccagcaaacgaatccgggccggtaccgagctgacgtgggactacaactatgaggtgggc
agcgtggagggaaaagagctgctctgctgctgcgggtccacagaatgcagaggaagattg
ctgtga
DBGET
integrated database retrieval system
