Oryzias melastigma (Indian medaka): 112143645
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Entry
112143645 CDS
T07439
Symbol
phc1
Name
(RefSeq) polyhomeotic-like protein 1 isoform X1
KO
K11456
polyhomeotic-like protein 1
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
112143645 (phc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oml03036
]
112143645 (phc1)
Chromosome and associated proteins [BR:
oml03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
112143645 (phc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-FCS_1
SAM_1
SAM_2
DUF3823_C
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
112143645
NCBI-ProteinID:
XP_024123540
Ensembl:
ENSOMEG00000012311
LinkDB
All DBs
Position
LG16:complement(6408707..6415400)
Genome browser
AA seq
762 aa
AA seq
DB search
MDAGEDQNTNSTNGNTQTSGNSRAPQIAHMSLYERQAVQALQALQRQPNAAQYFQQLMLQ
QQINNAQLQNLAAVQQATLAASRQSNTTSNSMSQVPTTVNQSTTSTGGTMSSPRAHGPAT
SAATTALNQSVLLGGNSTGQGQMYLRVGVKVNRSLRAPLASQLIFMPGATTATVAAVAQT
QPQQQQQHDAVSTNSSAQSDNDQVQNLALTCASTLKATAVKSELPERSDAAGFTLAQQPH
SVPPTAQQHQVQPQQQQQMSKPSFNQQPGSNPMSGKAALTVDPSASIAPSSTSSSALPLS
QLLLSPSAAPLILVPTSNVATSTPGYPKANMNAQTLVVQPLQQTTSSADKGPVPIQPKAA
QGHRLPVQLSPRHPPPILPAPPSNSQTSAGGAHIPVQLVGARQGLTGNTAAGGLAQTRSS
VAHEAPPGGAVGPVSYSAAMAKPVVGSLKRKSDFDGTESPDCVKDSAPPLSPAPTKDSAP
STEAPFSSPPILSLPPPLSRVGHGDKERAPLPQAVVKPQVLTHLIEGFVIQEGAEPFPVV
GLLKDRDFALAGRTENGPPLLKCEYCGCLAPASQFRGSKRFCSNTCAKRYNVSCSQHFKS
SRRRTAPPSLPTERHRGSVRSNSYTKISNKRLTVKRHSESSHSEDVSSDGEEEESPSLSP
NSSRSCSRADHSAPHSDCSAPGSLPLEGASFLSATPAQWSVEEVCRFISSLQGCEELAPQ
FLSQEIDGQALLLLREDHLISTMNIKLGPALKICASINSLRE
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atggatgcaggggaagatcaaaacacaaacagcaccaatggaaatactcagacaagtggg
aactcccgagcacctcagatagcacacatgtctttgtatgagagacaggctgttcaggct
cttcaagcgttgcaaagacaaccaaatgcagctcagtatttccagcagctcatgctgcag
cagcaaatcaacaatgcccagctccaaaacctggctgctgtgcaacaggcaacgcttgca
gccagtcgccagtctaatactacaagcaacagcatgtctcaggttcccaccactgtcaat
caaagcaccacatctacaggagggaccatgagcagcccgcgggcgcatggtccagcaacc
tctgcagccacgacggctctcaaccagtcagtgctgctgggcggaaactcaaccggacag
ggccagatgtatctcagggtaggtgtaaaggtaaaccgttctcttagggctcctcttgcc
tcccagctcatcttcatgcctggtgctacaacagctacagttgcagctgttgcacaaaca
caacctcagcagcagcagcaacatgatgccgtttccaccaattcgagcgcccagtctgac
aatgatcaggtgcagaatctagctctgacgtgtgcgtccacccttaaagcgacagctgtc
aaatctgagcttcctgagagaagcgatgctgctggttttactttggctcagcagccgcac
tctgtacccccgacagctcagcagcaccaagtgcaaccacaacagcagcaacaaatgtcc
aaacccagctttaaccagcagcctggctccaacccaatgtctggaaaggctgcactgacc
gttgacccatctgcctccatcgctccgtcttccacctcctcatctgcacttcctctctcc
cagctgctcctctctccctctgctgcccctttaattttggtgcccacttcgaatgtggcc
acctccaccccgggctacccaaaggccaacatgaacgcacagactctggtggtgcagccc
cttcaacagaccacttccagcgcggacaagggtcctgttcctattcaacccaaagcagct
cagggacaccgcctgcctgtgcagctgtcacctcgacacccacctcccattctcccagct
ccacctagcaacagtcagactagcgctgggggtgcacatattcctgtccagcttgtggga
gccaggcagggcttaacaggaaacacagcagctgggggcctggcccagactcgaagcagc
gtggcccatgaagctccacctggtggagctgttggcccagtctcctacagtgcagctatg
gcaaagccagtcgtcggttctctgaagaggaaatctgactttgatgggacagaatctccc
gattgtgtgaaagattctgctccccctctatctcctgcccccacaaaagactcggccccc
tctacagaagctccattctcatctcctcccatcctgtccttgcccccacccttgtcaaga
gtggggcatggcgacaaagagcgggcgccccttccccaggcggtggtcaagcctcaagtt
ctcactcacctcattgaggggtttgtgattcaggagggagcagagccgtttcctgttgtt
ggacttctcaaagacagagactttgccctggctggccgcacagagaatggccctccatta
ttgaaatgtgaatactgcggatgcctcgctccagccagtcagttcagaggttctaagagg
ttctgctccaatacttgtgccaagaggtataatgtgagctgcagccaacatttcaagtcg
agcagaaggagaacggcaccgccctccttacccacagagcgccacagggggtctgttcgc
agtaacagctacactaaaatctctaacaagcgtcttactgtcaagcggcactctgaatcc
agtcactcggaggacgtatcaagcgacggcgaagaagaagaatctccttcgctctcccca
aactcctcccgctcctgctccagagccgaccacagcgctcctcattccgactgctccgct
cctggaagcctgcctctagagggagccagttttctatctgccactccagctcagtggagc
gtagaagaagtctgccgcttcatttcctctcttcaaggttgtgaagaactggctcctcag
ttcctgtcacaggaaatagacgggcaggcgctcctgctgctgcgtgaggaccatctaatc
tccaccatgaacattaagctgggtccagctctgaagatctgtgcctccatcaacagtctg
cgagaataa
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