Oryzias melastigma (Indian medaka): 112145118
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Entry
112145118 CDS
T07439
Symbol
snrpb
Name
(RefSeq) small nuclear ribonucleoprotein-associated proteins B and B'
KO
K11086
small nuclear ribonucleoprotein B and B'
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112145118 (snrpb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oml03019
]
112145118 (snrpb)
03041 Spliceosome [BR:
oml03041
]
112145118 (snrpb)
03032 DNA replication proteins [BR:
oml03032
]
112145118 (snrpb)
Messenger RNA biogenesis [BR:
oml03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
112145118 (snrpb)
Spliceosome [BR:
oml03041
]
Complex A
U1 snRNP components
Sm proteins
112145118 (snrpb)
U2 snRNP components
112145118 (snrpb)
Complex B
U1 snRNP components
112145118 (snrpb)
U4/U6.U5 tri-snRNP components
112145118 (snrpb)
Complex C
U2 snRNP components
112145118 (snrpb)
DNA replication proteins [BR:
oml03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
112145118 (snrpb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
112145118
NCBI-ProteinID:
XP_024125934
Ensembl:
ENSOMEG00000002066
LinkDB
All DBs
Position
LG5:complement(16168325..16171665)
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AA seq
240 aa
AA seq
DB search
MTVGKSSKMLQHIDYRMRCILQDGRIFIGTFKAFDKHMNLILCDCDEFRKIKPKNSKQPE
REEKRVLGLVLLRGENLVSMTVEGPPPKDTGIARVPLAGVAGGPGVGRAAGRGVPAGAPM
PQAPAGLAGPVRGVGGPSQQVMTPQGRGTVAAAAAGASIAGAPTQYPPGRGAPPPMARGA
PPPGMMGPPPGMRPPMGPPMGMPPGPGRGAPMGMPPPGMRPPPPGLRGPPPPGMRPPPRP
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgacggtgggtaagagcagtaagatgctgcagcacatcgactacaggatgaggtgcatc
ctgcaggacggtcgtatcttcatcggcaccttcaaagcctttgacaaacacatgaacctg
atcctgtgtgactgcgacgagttcaggaagatcaaaccaaagaactcaaagcagccagag
cgggaggagaagcgagtgctcggcttggttctgctgaggggggagaatctcgtctcaatg
accgtggagggcccgccccctaaagatacggggattgcccgggttccgttggcgggtgtt
gctggaggtccaggagtgggtcgagcggcaggtcgcggcgttcctgcaggagcaccgatg
cctcaggccccagctggtcttgcagggccggttagaggagtgggtggcccctcgcagcag
gtgatgaccccacagggtcgagggacggttgctgcagctgcagcaggagcgagcattgct
ggtgctccgacacaatacccccctgggcgaggagccccaccccctatggccagaggagcc
ccaccccctggtatgatgggccctcccccaggcatgaggccccctatgggccctccaatg
ggaatgccccctggtccaggtcgcggtgctccaatgggaatgccccctccaggcatgaga
ccacctcctcctggtttaagaggacctcctcctcccgggatgagaccaccccctcgaccc
taa
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integrated database retrieval system
