Oryzias melastigma (Indian medaka): 112145229
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Entry
112145229 CDS
T07439
Name
(RefSeq) RLA class II histocompatibility antigen, DP alpha-1 chain
KO
K06752
MHC class II antigen
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04145
Phagosome
oml04514
Cell adhesion molecules
oml04672
Intestinal immune network for IgA production
oml05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
112145229
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
112145229
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
112145229
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
112145229
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oml04147
]
112145229
Exosome [BR:
oml04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112145229
Exosomal proteins of epithelial cells
112145229
Exosomal proteins of breast milk
112145229
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C1-set
Ig_2
Ig_3
MHC_II_alpha
ig
C2-set_2
Motif
Other DBs
NCBI-GeneID:
112145229
NCBI-ProteinID:
XP_024126125
Ensembl:
ENSOMEG00000023858
UniProt:
A0A3B3CXF2
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Position
LG5:1991249..1995402
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AA seq
240 aa
AA seq
DB search
MSLTALLLITGAVCASSTTPSHVFHFIYGCYETDDVRVDLVVDEDTIGYADFNKQEMVWR
LPYVPSGGKDLKKEAFKFARNSIAHCHSVLAKAKKADHGSPLHQEPPDISIYTRYKSEEG
VLNTLFCSANHFYPPTINFTWTKNGVEVTEGLLNLRFSHNKDGTFRRISTLSFTPQRGDV
YSCRVSHEALERPLVMTWESRIQRNPARVFFFASLLLCLAGIGTGFYFFTKKPKLCCVCR
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgtccctcactgctctgcttttgatcactggggctgtttgtgcttcttcaacaacacca
agtcacgtgttccacttcatctatggatgctacgaaaccgacgatgtgcgagtggacttg
gttgttgatgaagacacgatcggatatgctgatttcaacaaacaagagatggtgtggcgt
ttaccttatgtgccatcaggaggaaaagacttaaagaaagaagctttcaaatttgccaga
aacagcattgcacactgtcattctgttttggcaaaggcaaaaaaagcagatcatggaagt
cctttacatcaggaacctcctgacatctccatctatacccgttacaagagtgaggagggg
gtgctcaacactctcttctgctctgccaatcacttctaccccccgaccatcaacttcacg
tggaccaagaatggcgtggaggtcacggaggggttgttgaacctacgtttcagtcacaac
aaagacgggacgtttcgcaggatttcaaccctgagcttcacccctcaaaggggggacgtt
tactcctgtagggtgagccatgaagccttggaaagacctctcgtcatgacctgggaatcc
agaatccagaggaatcctgctcgtgtgtttttctttgcaagtctgcttctgtgcttagct
ggtatcgggaccggcttctactttttcaccaagaaaccaaagctttgctgtgtttgtcgg
tga
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